RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 ZBTB46Q86UZ6 589 aa15.8■□□□□ 0.12
VEGFA-222ENST00000520948 WFDC8Q8IUA0 241 aa15.8■□□□□ 0.12
VEGFA-222ENST00000520948 IQCF1Q8N6M8 205 aa15.8■□□□□ 0.12
VEGFA-222ENST00000520948 FAM169BQ8N8A8 192 aa15.8■□□□□ 0.12
VEGFA-222ENST00000520948 NSMAFQ92636 917 aa15.8■□□□□ 0.12
VEGFA-222ENST00000520948 TSSK2Q96PF2 358 aa15.8■□□□□ 0.12
VEGFA-222ENST00000520948 RBM4BQ9BQ04 359 aaKnown RBP15.8■□□□□ 0.12
VEGFA-222ENST00000520948 RBM4Q9BWF3 364 aaKnown RBP15.8■□□□□ 0.12
VEGFA-222ENST00000520948 CMC2Q9NRP2 79 aa15.8■□□□□ 0.12
VEGFA-222ENST00000520948 CRNNQ9UBG3 495 aaPredicted RBP15.8■□□□□ 0.12
VEGFA-222ENST00000520948 KLHL21Q9UJP4 597 aa15.8■□□□□ 0.12
VEGFA-222ENST00000520948 B9D1Q9UPM9 204 aa15.8■□□□□ 0.12
VEGFA-222ENST00000520948 IGLV1-36A0A0B4J1U3 117 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 SLC16A7O60669 478 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 KHDRBS3O75525 346 aaKnown RBP15.79■□□□□ 0.12
VEGFA-222ENST00000520948 BAG2O95816 211 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 WNT11O96014 354 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 RENP00797 406 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 SCG5P05408 212 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 OR8G3PP0DMU2 310 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 ANPEPP15144 967 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 POU1F1P28069 291 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 EPHA2P29317 976 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 CDAP32320 146 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 DAG1Q14118 895 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 PTGES3Q15185 160 aaKnown RBP15.79■□□□□ 0.12
VEGFA-222ENST00000520948 BEX5Q5H9J7 111 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 NCMAPQ5T1S8 102 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 FAM27BQ5VT28 67 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 TMEM236Q5W0B7 351 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 JAZF1Q86VZ6 243 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 OR6V1Q8N148 313 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 SLC37A3Q8NCC5 494 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 SDR9C7Q8NEX9 313 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 FGFBP3Q8TAT2 258 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 SLC29A1Q99808 456 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 C9orf16Q9BUW7 83 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 NMNAT2Q9BZQ4 307 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 SIAEQ9HAT2 523 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 NGBQ9NPG2 151 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 COA3Q9Y2R0 106 aaPredicted RBP15.79■□□□□ 0.12
VEGFA-222ENST00000520948 FKBP7Q9Y680 259 aa15.79■□□□□ 0.12
VEGFA-222ENST00000520948 DPRXA6NFQ7 191 aa15.78■□□□□ 0.12
VEGFA-222ENST00000520948 E9PQ18 207 aa15.78■□□□□ 0.12
VEGFA-222ENST00000520948 EI24O14681 340 aa15.78■□□□□ 0.12
VEGFA-222ENST00000520948 CBR1P16152 277 aa15.78■□□□□ 0.12
VEGFA-222ENST00000520948 NPR2P20594 1047 aa15.78■□□□□ 0.12
VEGFA-222ENST00000520948 IGFBP5P24593 272 aa15.78■□□□□ 0.12
VEGFA-222ENST00000520948 CRABP1P29762 137 aa15.78■□□□□ 0.12
VEGFA-222ENST00000520948 ALDH3A2P51648 485 aa15.78■□□□□ 0.12
VEGFA-222ENST00000520948 UBE2NP61088 152 aaKnown RBP15.78■□□□□ 0.12
VEGFA-222ENST00000520948 TUBA1BP68363 451 aa15.78■□□□□ 0.12
VEGFA-222ENST00000520948 TUBA4AP68366 448 aa15.78■□□□□ 0.12
VEGFA-222ENST00000520948 RCN1Q15293 331 aa15.78■□□□□ 0.12
VEGFA-222ENST00000520948 C3orf36Q3SXR2 165 aa15.78■□□□□ 0.12
VEGFA-222ENST00000520948 TUBA1AQ71U36 451 aa15.78■□□□□ 0.12
VEGFA-222ENST00000520948 CBR4Q8N4T8 237 aa15.78■□□□□ 0.12
VEGFA-222ENST00000520948 HTRA1Q92743 480 aa15.78■□□□□ 0.12
VEGFA-222ENST00000520948 MDFIQ99750 246 aa15.78■□□□□ 0.12
VEGFA-222ENST00000520948 SH3GL3Q99963 347 aa15.78■□□□□ 0.12
VEGFA-222ENST00000520948 RACGAP1Q9H0H5 632 aa15.78■□□□□ 0.12
VEGFA-222ENST00000520948 SRA1Q9HD15 236 aaKnown RBP15.78■□□□□ 0.12
VEGFA-222ENST00000520948 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.77■□□□□ 0.12
VEGFA-222ENST00000520948 ZAR1LA6NP61 321 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 SURF4O15260 269 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 IGKV3-15P01624 115 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 IGLV1-44P01699 117 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 HMGN1P05114 100 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 LAP3P28838 519 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 POLR2IP36954 125 aaKnown RBP15.77■□□□□ 0.12
VEGFA-222ENST00000520948 EFNB1P98172 346 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 DBPQ10586 325 aaPredicted RBP15.77■□□□□ 0.12
VEGFA-222ENST00000520948 NPRL3Q12980 569 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 CRMP1Q14194 572 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 KCNMB1Q16558 191 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 SLX4IPQ5VYV7 408 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 C20orf204Q6ZNR8 217 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 CYB561A3Q8NBI2 242 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 ZNRF4Q8WWF5 429 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 PTP4A1Q93096 173 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 PLPPR2Q96GM1 343 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 TMEM204Q9BSN7 226 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 C1QTNF6Q9BXI9 259 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 GABARAPL3Q9BY60 117 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 DCLRE1BQ9H816 532 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 NOX3Q9HBY0 568 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 RPRD1BQ9NQG5 326 aaKnown RBP15.77■□□□□ 0.12
VEGFA-222ENST00000520948 POLE4Q9NR33 117 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 ENOPH1Q9UHY7 261 aa15.77■□□□□ 0.12
VEGFA-222ENST00000520948 INAFM1C9JVW0 142 aa15.76■□□□□ 0.11
VEGFA-222ENST00000520948 FARS2O95363 451 aaKnown RBP15.76■□□□□ 0.11
VEGFA-222ENST00000520948 HLA-HP01893 362 aa15.76■□□□□ 0.11
VEGFA-222ENST00000520948 MMP7P09237 267 aaPredicted RBP15.76■□□□□ 0.11
VEGFA-222ENST00000520948 SLC25A1P53007 311 aa15.76■□□□□ 0.11
VEGFA-222ENST00000520948 RAB1AP62820 205 aa15.76■□□□□ 0.11
VEGFA-222ENST00000520948 ENDOGQ14249 297 aaKnown RBP15.76■□□□□ 0.11
VEGFA-222ENST00000520948 SGCAQ16586 387 aa15.76■□□□□ 0.11
VEGFA-222ENST00000520948 ALKBH2Q6NS38 261 aa15.76■□□□□ 0.11
VEGFA-222ENST00000520948 DNM1P34Q6PK57 102 aa15.76■□□□□ 0.11
VEGFA-222ENST00000520948 PRSS57Q6UWY2 283 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms