RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 GPD1LQ8N335 351 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 ATP6V0D2Q8N8Y2 350 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 NPRL2Q8WTW4 380 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 RASD2Q96D21 266 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 NUS1Q96E22 293 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 BTN2A3PQ96KV6 586 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 RBM14Q96PK6 669 aaKnown RBP3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 RAB34Q9BZG1 259 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 OCR1Q9BZK8 76 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 MRM3Q9HC36 420 aaKnown RBP3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 ZDHHC18Q9NUE0 388 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 ANAPC7Q9UJX3 599 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 VANGL2Q9ULK5 521 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 SPATA2Q9UM82 520 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 OR51B4Q9Y5P0 310 aa3.8□□□□□ -1.8
HMGB1P23-201ENST00000518743 A0A0D9SEW6 157 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 METTL21EPA6NDL7 271 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 HELTA6NFD8 242 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 ZSCAN5BA6NJL1 495 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 ZNF233A6NK53 670 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 CCT8L1PA6NM43 557 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 GABRR3A8MPY1 467 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 PDZK1P1A8MUH7 402 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 E9PBE3 544 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 G3V2L1 256 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 C3orf84H3BNL1 204 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 GOLGA8SH3BPF8 625 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 OR7A17O14581 309 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 CLDN11O75508 207 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 RHBDL1O75783 438 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 LRATO95237 230 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 AGTP01019 485 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 PNMTP11086 282 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 UQCRC2P22695 453 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 CAPGP40121 348 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 MAGEA5P43359 124 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 SUCLG1P53597 346 aaKnown RBP3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 ZNF85Q03923 595 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 RGS1Q08116 209 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 CUL2Q13617 745 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 DPYSL2Q16555 572 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 CAMK4Q16566 473 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 CNPY1Q3B7I2 92 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 TMEM30BQ3MIR4 351 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 NKAIN1Q4KMZ8 207 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 PYCR3Q53H96 274 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 FAHD2BQ6P2I3 314 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 GDPGP1Q6ZNW5 385 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 LANCL3Q6ZV70 420 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 CCDC80Q76M96 950 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 LRRC49Q8IUZ0 686 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 VSTM4Q8IW00 320 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 BBS5Q8N3I7 341 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 CEP112Q8N8E3 955 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 OR2AP1Q8NGE2 309 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 NABP1Q96AH0 204 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 C8orf44Q96CB5 159 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 CXorf40BQ96DE9 158 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 FAHD2AQ96GK7 314 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 C9orf85Q96MD7 179 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 NPAS2Q99743 824 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 UTP23Q9BRU9 249 aaKnown RBP3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 UCK1Q9HA47 277 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 IL1RL2Q9HB29 575 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 AMBNQ9NP70 447 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 ETNK2Q9NVF9 386 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 WWOXQ9NZC7 414 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 RABL2AQ9UBK7 228 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 PIGLQ9Y2B2 252 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 SLC17A4Q9Y2C5 497 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 FBXO7Q9Y3I1 522 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 PYGO1Q9Y3Y4 419 aa3.79□□□□□ -1.8
HMGB1P23-201ENST00000518743 DOCK4Q8N1I0 1966 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 RAI1Q7Z5J4 1906 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 OR6C65A6NJZ3 312 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 FAM74A7A6NL05 159 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 FCMRO60667 390 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 UGT2B17O75795 530 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 ZNF432O94892 652 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 IGF1P05019 195 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 SERPINA7P05543 415 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 FREM3P0C091 2139 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 SDC1P18827 310 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 CCT3P49368 545 aaKnown RBP3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 CCR8P51685 355 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 UBE2IP63279 158 aaKnown RBP3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 ZIC1Q15915 447 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 FAM74A3Q4VXF1 159 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 DMRTC1Q5HYR2 192 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 C1orf185Q5T7R7 199 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 LGSNQ5TDP6 509 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 RUSC1-AS1Q66K80 236 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 SPINK14Q6IE38 97 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 FAAP20Q6NZ36 180 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 FBXL22Q6P050 247 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 BHLHA9Q7RTU4 235 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 KIAA1328Q86T90 577 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 PRSS58Q8IYP2 241 aa3.78□□□□□ -1.8
HMGB1P23-201ENST00000518743 OR4D5Q8NGN0 318 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms