RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 ITIH4Q14624 930 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 TRAM2Q15035 370 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 PON3Q15166 354 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 TMEM183BQ1AE95 376 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 ZBED5Q49AG3 693 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 C2orf83Q53S99 150 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 CCNJQ5T5M9 372 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 TWF2Q6IBS0 349 aaKnown RBP2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 LCN12Q6JVE5 192 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 NPSR1Q6W5P4 371 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 STRADAQ7RTN6 431 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 TMEM183AQ8IXX5 376 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 OFCC1Q8IZS5 231 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 STPG2Q8N412 459 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 PRELID2Q8N945 189 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 TTC29Q8NA56 475 aaPredicted RBP2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 CCDC54Q8NEL0 328 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 BPIFCQ8NFQ6 507 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 OR10J6PQ8NGY7 276 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 OR5K2Q8NHB8 316 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 SLC7A13Q8TCU3 470 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 ACER1Q8TDN7 264 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 ISG20Q96AZ6 181 aaKnown RBP2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 CREB3L1Q96BA8 519 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 RNF185Q96GF1 192 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 C9orf72Q96LT7 481 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 WFIKKN1Q96NZ8 548 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 SERPINB12Q96P63 405 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 GABARAPL3Q9BY60 117 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 RPP21Q9H633 154 aaKnown RBP2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 CLMPQ9H6B4 373 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 RPF2Q9H7B2 306 aaKnown RBP2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 ISYNA1Q9NPH2 558 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 ZNF629Q9UEG4 869 aaPredicted RBP2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 CD84Q9UIB8 345 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 CELA1Q9UNI1 258 aa2.18□□□□□ -2.06
RNU6-390P-201ENST00000516259 ZNF816-ZNF321PA0A0X1KG74 233 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 A0A1W2PRD5 423 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 GOLGA8TH3BQL2 631 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 LSM1O15116 133 aaKnown RBP2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 SS18L1O75177 396 aaPredicted RBP2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 TNFSF13O75888 250 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 AIFM1O95831 613 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 HLA-HP01893 362 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 CALM1P0DP23 149 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 CALM2P0DP24 149 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 CALM3P0DP25 149 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 ZNF250P15622 560 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 ZNF30P17039 623 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 WARSP23381 471 aaKnown RBP2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 DCKP27707 260 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 DRD3P35462 400 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 RBMXP38159 391 aaKnown RBP2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 CSNK1EP49674 416 aaKnown RBP2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 KRTAP10-3P60369 221 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 KRTAP10-7P60409 375 aaPredicted RBP2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 NUTF2P61970 127 aaKnown RBP2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 ACTA2P62736 377 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 ACTG2P63267 376 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 ACTC1P68032 377 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 ACTA1P68133 377 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 SP4Q02446 784 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 ZNF726P1Q15940 193 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 PPM1LQ5SGD2 360 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 DUX4L9Q6RFH8 374 aaPredicted RBP2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 ZNF493Q6ZR52 646 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 MKXQ8IYA7 352 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 CMTM1Q8IZ96 169 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 Q8N7P7 452 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 FAM184AQ8NB25 1140 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 OR9G4Q8NGQ1 327 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 LYPD6BQ8NI32 183 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 ZNF502Q8TBZ5 544 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 SRSF12Q8WXF0 261 aaKnown RBP2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 ZIM3Q96PE6 472 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 LYRM4Q9HD34 91 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 CLN6Q9NWW5 311 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 ZNF282Q9UDV7 671 aaPredicted RBP2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 HEBP2Q9Y5Z4 205 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 NFASCO94856 1347 aa2.17□□□□□ -2.06
RNU6-390P-201ENST00000516259 TP53BP1Q12888 1972 aaPredicted RBP2.16□□□□□ -2.06
RNU6-390P-201ENST00000516259 IGHV3-66A0A0C4DH42 116 aa2.16□□□□□ -2.06
RNU6-390P-201ENST00000516259 SMKR1H3BMG3 65 aa2.16□□□□□ -2.06
RNU6-390P-201ENST00000516259 M0R3G1 203 aa2.16□□□□□ -2.06
RNU6-390P-201ENST00000516259 ICOSLGO75144 302 aa2.16□□□□□ -2.06
RNU6-390P-201ENST00000516259 SUPT3HO75486 399 aa2.16□□□□□ -2.06
RNU6-390P-201ENST00000516259 CCNB2O95067 398 aa2.16□□□□□ -2.06
RNU6-390P-201ENST00000516259 PCCAP05165 728 aaPredicted RBP2.16□□□□□ -2.06
RNU6-390P-201ENST00000516259 CTRB1P17538 263 aa2.16□□□□□ -2.06
RNU6-390P-201ENST00000516259 ATF6P18850 670 aa2.16□□□□□ -2.06
RNU6-390P-201ENST00000516259 MSR1P21757 451 aa2.16□□□□□ -2.06
RNU6-390P-201ENST00000516259 CCT6AP40227 531 aaKnown RBP2.16□□□□□ -2.06
RNU6-390P-201ENST00000516259 PEX19P40855 299 aa2.16□□□□□ -2.06
RNU6-390P-201ENST00000516259 CXCL5P42830 114 aa2.16□□□□□ -2.06
RNU6-390P-201ENST00000516259 CDKN1BP46527 198 aa2.16□□□□□ -2.06
RNU6-390P-201ENST00000516259 SLC7A9P82251 487 aa2.16□□□□□ -2.06
RNU6-390P-201ENST00000516259 CKAP4Q07065 602 aaKnown RBP2.16□□□□□ -2.06
RNU6-390P-201ENST00000516259 IFT88Q13099 833 aa2.16□□□□□ -2.06
RNU6-390P-201ENST00000516259 PSG5Q15238 335 aa2.16□□□□□ -2.06
RNU6-390P-201ENST00000516259 UBE2SQ16763 222 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms