RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 RPS4Y1P22090 263 aaKnown RBP3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 CRYGSP22914 178 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 LOXP28300 417 aaPredicted RBP3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 ELK4P28324 431 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 SHC1P29353 583 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 AGTR1P30556 359 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 CDAP32320 146 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 P2RX1P51575 399 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 CASP9P55211 416 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 CARD18P57730 90 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 SIRPAP78324 504 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 KCNJ10P78508 379 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 FUT5Q11128 374 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 FOXF1Q12946 379 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 FOXD4Q12950 439 aaPredicted RBP3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 FADDQ13158 208 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 QPRTQ15274 297 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 RGNQ15493 299 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 TOMM34Q15785 309 aaPredicted RBP3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 TBCEQ15813 527 aaPredicted RBP3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 MAPK14Q16539 360 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 SYPL1Q16563 259 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 DEFB113Q30KQ7 82 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 NDUFAF6Q330K2 333 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 TMEM176BQ3YBM2 270 aaPredicted RBP3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 SLC25A53Q5H9E4 307 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 COQ5Q5HYK3 327 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 PDSS1Q5T2R2 415 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 ATAD3BQ5T9A4 648 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 PRAMEF8Q5VWM4 474 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 PRAMEF7Q5VXH5 474 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 HBMQ6B0K9 141 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 LRRC74BQ6ZQY2 392 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 ZNF550Q7Z398 422 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 CPLX4Q7Z7G2 160 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 RNF130Q86XS8 419 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 HRNRQ86YZ3 2850 aaPredicted RBP3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 FOXRED2Q8IWF2 684 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 TUSC5Q8IXB3 177 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 TRIML2Q8N7C3 387 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 FAM71CQ8NEG0 241 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 WFDC11Q8NEX6 87 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 OR5AK3PQ8NH89 298 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 OR2V1Q8NHB1 315 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 GPR119Q8TDV5 335 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 C10orf82Q8WW14 230 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 ROBO4Q8WZ75 1007 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 OSTF1Q92882 214 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 RAB8BQ92930 207 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 ROPN1LQ96C74 230 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 PIK3IP1Q96FE7 263 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 THOC1Q96FV9 657 aaKnown RBP3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 SH3YL1Q96HL8 342 aaPredicted RBP3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 GMPPAQ96IJ6 420 aaPredicted RBP3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 ANKRD27Q96NW4 1050 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 MED18Q9BUE0 208 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 THUMPD3Q9BV44 507 aaKnown RBP3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 CCDC106Q9BWC9 280 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 SRXN1Q9BYN0 137 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 PRRG4Q9BZD6 226 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 ZNF350Q9GZX5 532 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 LAT2Q9GZY6 243 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 SLC38A1Q9H2H9 487 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 KCNN2Q9H2S1 579 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 OR51I1Q9H343 314 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 IKZF5Q9H5V7 419 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 TMEM38AQ9H6F2 299 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 TMEM185BQ9H7F4 350 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 PPP1R3EQ9H7J1 279 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 RMND5AQ9H871 391 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 TPT1P8Q9HAU6 139 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 A4GALTQ9NPC4 353 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 HINT3Q9NQE9 182 aaKnown RBP3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 GLRX2Q9NS18 164 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 ACER3Q9NUN7 267 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 EXD2Q9NVH0 621 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 ZNF226Q9NYT6 803 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 VAPAQ9P0L0 249 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 MCTS1Q9ULC4 181 aaKnown RBP3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 CLEC4AQ9UMR7 237 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 NDUFAF1Q9Y375 327 aa3.06□□□□□ -1.92
UBE2D3-226ENST00000508635 ANKHD1Q8IWZ3 2542 aaKnown RBP3.05□□□□□ -1.92
UBE2D3-226ENST00000508635 AKAP6Q13023 2319 aa3.05□□□□□ -1.92
UBE2D3-226ENST00000508635 HEATR1Q9H583 2144 aaKnown RBP3.05□□□□□ -1.92
UBE2D3-226ENST00000508635 DSPPQ9NZW4 1301 aa3.05□□□□□ -1.92
UBE2D3-226ENST00000508635 SAA2-SAA4A0A096LPE2 208 aa3.05□□□□□ -1.92
UBE2D3-226ENST00000508635 A0A0G2JPF8 293 aa3.05□□□□□ -1.92
UBE2D3-226ENST00000508635 LOC100653049A0A140TA62 436 aa3.05□□□□□ -1.92
UBE2D3-226ENST00000508635 SERINC4A6NH21 518 aa3.05□□□□□ -1.92
UBE2D3-226ENST00000508635 EVPLLA8MZ36 301 aa3.05□□□□□ -1.92
UBE2D3-226ENST00000508635 HNRNPCL2B2RXH8 293 aa3.05□□□□□ -1.92
UBE2D3-226ENST00000508635 HNRNPCL3B7ZW38 293 aa3.05□□□□□ -1.92
UBE2D3-226ENST00000508635 NR5A2O00482 541 aa3.05□□□□□ -1.92
UBE2D3-226ENST00000508635 FAAHO00519 579 aa3.05□□□□□ -1.92
UBE2D3-226ENST00000508635 SMAD9O15198 467 aaKnown RBP3.05□□□□□ -1.92
UBE2D3-226ENST00000508635 KIAA0513O60268 411 aa3.05□□□□□ -1.92
UBE2D3-226ENST00000508635 HNRNPCL1O60812 293 aaKnown RBP3.05□□□□□ -1.92
UBE2D3-226ENST00000508635 CCDC22O60826 627 aa3.05□□□□□ -1.92
UBE2D3-226ENST00000508635 SHOX2O60902 331 aaPredicted RBP3.05□□□□□ -1.92
UBE2D3-226ENST00000508635 BCAS1O75363 584 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms