RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 C2CD3Q4AC94 2353 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 CSPG4Q6UVK1 2322 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 TNFRSF11BO00300 401 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 IMPA2O14732 288 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 KRT36O76013 467 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 PPP1R3DO95685 299 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 SDHAP31040 664 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 RPS6KA3P51812 740 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 DSCR9P59020 149 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 RPS23P62266 143 aaKnown RBP12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 PSG4Q00888 419 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 CARTPTQ16568 116 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 RFX4Q33E94 735 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 GPR139Q6DWJ6 353 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 LRP11Q86VZ4 500 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 ICA1LQ8NDH6 482 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 CPEB3Q8NE35 698 aaKnown RBP12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 OR1J2Q8NGS2 313 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 GNPDA2Q8TDQ7 276 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 FAM168AQ92567 244 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 MRPL24Q96A35 216 aaKnown RBP12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 ERMAPQ96PL5 475 aaPredicted RBP12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 GPX7Q96SL4 187 aaPredicted RBP12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 MRPL37Q9BZE1 423 aaKnown RBP12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 RAB1BQ9H0U4 201 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 SYT4Q9H2B2 425 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 LRMDAQ9H2I8 198 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 OR52D1Q9H346 318 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 C1orf198Q9H425 327 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 EMC7Q9NPA0 242 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 DUSP13Q9UII6 198 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 LYVE1Q9Y5Y7 322 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 FKBP7Q9Y680 259 aa12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 SETD2Q9BYW2 2564 aaPredicted RBP12.19□□□□□ -0.46
CCHCR1-222ENST00000507459 GYG2O15488 501 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 SLC16A7O60669 478 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 SCG5P05408 212 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 LCKP06239 509 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 HEXAP06865 529 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 ADRA2AP08913 450 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 CST2P09228 141 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 CTLA4P16410 223 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 MSR1P21757 451 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 FPR3P25089 353 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 STOMP27105 288 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 SLC6A6P31641 620 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 CENPAP49450 140 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 PPOXP50336 477 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 FAM98BQ52LJ0 330 aaKnown RBP12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 OTPQ5XKR4 325 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 RGS7BPQ6MZT1 257 aaPredicted RBP12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 C1orf94Q6P1W5 598 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 PGBD2Q6P3X8 592 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 UGT2A3Q6UWM9 527 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 FOXL2NBQ6ZUU3 175 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 PTCHD4Q6ZW05 846 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 OR10H5Q8NGA6 315 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 OR9Q2Q8NGE9 314 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 ASB9Q96DX5 294 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 SAMD8Q96LT4 415 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 IFT27Q9BW83 186 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 ZNF416Q9BWM5 594 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 OR2H1Q9GZK4 316 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 MAGIXQ9H6Y5 334 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 POLE4Q9NR33 117 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 COA3Q9Y2R0 106 aaPredicted RBP12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 TIMM10BQ9Y5J6 103 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 U3KQV3 271 aa12.18□□□□□ -0.46
CCHCR1-222ENST00000507459 C5orf49A4QMS7 147 aa12.17□□□□□ -0.46
CCHCR1-222ENST00000507459 C12orf71A8MTZ7 269 aa12.17□□□□□ -0.46
CCHCR1-222ENST00000507459 AHCYL1O43865 530 aa12.17□□□□□ -0.46
CCHCR1-222ENST00000507459 KHDRBS3O75525 346 aaKnown RBP12.17□□□□□ -0.46
CCHCR1-222ENST00000507459 CDKN2AP42771 156 aaKnown RBP12.17□□□□□ -0.46
CCHCR1-222ENST00000507459 ALDH3B1P43353 468 aa12.17□□□□□ -0.46
CCHCR1-222ENST00000507459 MAGEA2P43356 314 aa12.17□□□□□ -0.46
CCHCR1-222ENST00000507459 GSSP48637 474 aa12.17□□□□□ -0.46
CCHCR1-222ENST00000507459 GDI2P50395 445 aaKnown RBP12.17□□□□□ -0.46
CCHCR1-222ENST00000507459 HMGA2P52926 109 aa12.17□□□□□ -0.46
CCHCR1-222ENST00000507459 PCBD1P61457 104 aa12.17□□□□□ -0.46
CCHCR1-222ENST00000507459 ERVS71-1P61550 626 aa12.17□□□□□ -0.46
CCHCR1-222ENST00000507459 TSPAN31Q12999 210 aa12.17□□□□□ -0.46
CCHCR1-222ENST00000507459 ENDOGQ14249 297 aaKnown RBP12.17□□□□□ -0.46
CCHCR1-222ENST00000507459 ADCK1Q86TW2 530 aa12.17□□□□□ -0.46
CCHCR1-222ENST00000507459 ALDH16A1Q8IZ83 802 aa12.17□□□□□ -0.46
CCHCR1-222ENST00000507459 NUAK2Q9H093 628 aa12.17□□□□□ -0.46
CCHCR1-222ENST00000507459 WNT5BQ9H1J7 359 aa12.17□□□□□ -0.46
CCHCR1-222ENST00000507459 TPK1Q9H3S4 243 aa12.17□□□□□ -0.46
CCHCR1-222ENST00000507459 MYEF2Q9P2K5 600 aaKnown RBP12.17□□□□□ -0.46
CCHCR1-222ENST00000507459 FBXO9Q9UK97 447 aaPredicted RBP12.17□□□□□ -0.46
CCHCR1-222ENST00000507459 SAMHD1Q9Y3Z3 626 aaKnown RBP12.17□□□□□ -0.46
CCHCR1-222ENST00000507459 A0A1W2PPW3 197 aa12.16□□□□□ -0.46
CCHCR1-222ENST00000507459 M0R233 179 aa12.16□□□□□ -0.46
CCHCR1-222ENST00000507459 ACOT8O14734 319 aa12.16□□□□□ -0.46
CCHCR1-222ENST00000507459 SYNGR3O43761 229 aa12.16□□□□□ -0.46
CCHCR1-222ENST00000507459 CCNB2O95067 398 aa12.16□□□□□ -0.46
CCHCR1-222ENST00000507459 MPZL1O95297 269 aa12.16□□□□□ -0.46
CCHCR1-222ENST00000507459 SNAP29O95721 258 aa12.16□□□□□ -0.46
CCHCR1-222ENST00000507459 TXNDC12O95881 172 aa12.16□□□□□ -0.46
CCHCR1-222ENST00000507459 GASTP01350 101 aa12.16□□□□□ -0.46
CCHCR1-222ENST00000507459 ERCC1P07992 297 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms