RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 Q9UFV3 132 aa9.73□□□□□ -0.85
HDLBP-242ENST00000488013 FBXL3Q9UKT7 428 aa9.73□□□□□ -0.85
HDLBP-242ENST00000488013 DIMT1Q9UNQ2 313 aaKnown RBP9.73□□□□□ -0.85
HDLBP-242ENST00000488013 EXOGQ9Y2C4 368 aaKnown RBP9.73□□□□□ -0.85
HDLBP-242ENST00000488013 POLR1DQ9Y2S0 133 aa9.73□□□□□ -0.85
HDLBP-242ENST00000488013 EXOSC1Q9Y3B2 195 aaKnown RBP9.73□□□□□ -0.85
HDLBP-242ENST00000488013 PCDHGB5Q9Y5G0 923 aa9.73□□□□□ -0.85
HDLBP-242ENST00000488013 PCNX3Q9H6A9 2034 aa9.73□□□□□ -0.85
HDLBP-242ENST00000488013 MED12Q93074 2177 aa9.73□□□□□ -0.85
HDLBP-242ENST00000488013 BSNQ9UPA5 3926 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 A0A1W2PPL8 197 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 MAGEA13PA6NCF6 341 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 A8MXE2 369 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 PTGES3LE9PB15 166 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 DCTN6O00399 190 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 RGS10O43665 173 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 RAB36O95755 333 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 CST2P09228 141 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 GAAP10253 952 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 CLUP10909 449 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 COX5AP20674 150 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 BMP5P22003 454 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 PYCR1P32322 319 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 PEX19P40855 299 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 NUDT6P53370 316 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 ACTA2P62736 377 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 ACTG2P63267 376 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 ADAM8P78325 824 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 SLC35A2P78381 396 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 FMODQ06828 376 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 SCRN3Q0VDG4 424 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 MRPL49Q13405 166 aaKnown RBP9.72□□□□□ -0.85
HDLBP-242ENST00000488013 SLC36A2Q495M3 483 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 VWA1Q6PCB0 445 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 XKRXQ6PP77 449 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 KLHL24Q6TFL4 600 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 ZNF813Q6ZN06 617 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 PRSS48Q7RTY5 328 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 KCTD20Q7Z5Y7 419 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 LSRQ86X29 649 aaPredicted RBP9.72□□□□□ -0.85
HDLBP-242ENST00000488013 TIGD4Q8IY51 512 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 GABRG1Q8N1C3 465 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 SLC22A24Q8N4F4 322 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 SVOPQ8N4V2 548 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 NAXEQ8NCW5 288 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 STEAP2Q8NFT2 490 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 OR51L1Q8NGJ5 315 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 OR51G2Q8NGK0 314 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 PRR7Q8TB68 274 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 GGHQ92820 318 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 KISS1RQ969F8 398 aaPredicted RBP9.72□□□□□ -0.85
HDLBP-242ENST00000488013 LGALS12Q96DT0 336 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 ZMYND19Q96E35 227 aaPredicted RBP9.72□□□□□ -0.85
HDLBP-242ENST00000488013 BBC3Q96PG8 261 aaPredicted RBP9.72□□□□□ -0.85
HDLBP-242ENST00000488013 ADGRL4Q9HBW9 690 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 AMBNQ9NP70 447 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 FKBP14Q9NWM8 211 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 ERGIC3Q9Y282 383 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 SLC5A6Q9Y289 635 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 UGT2A1Q9Y4X1 527 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 SNX5Q9Y5X3 404 aa9.72□□□□□ -0.85
HDLBP-242ENST00000488013 COL6A6A6NMZ7 2263 aa9.71□□□□□ -0.85
HDLBP-242ENST00000488013 A0A087WXM4 84 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 CIB4A0PJX0 185 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 TRIM64A6NGJ6 449 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 EEF1E1-BLOC1S5C9J1V9 151 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 ZNF670-ZNF695F2Z2N8 137 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 ZNF593O00488 134 aaPredicted RBP9.71□□□□□ -0.86
HDLBP-242ENST00000488013 LRRTM2O43300 516 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 EEF1E1O43324 174 aaKnown RBP9.71□□□□□ -0.86
HDLBP-242ENST00000488013 XPNPEP2O43895 674 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 UBL3O95164 117 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 IGHV3-9P01782 118 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 CDK1P06493 297 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 PPP3CBP16298 524 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 PSMB1P20618 241 aaKnown RBP9.71□□□□□ -0.86
HDLBP-242ENST00000488013 ARR3P36575 388 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 TUBA4AP68366 448 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 ARF1P84077 181 aaKnown RBP9.71□□□□□ -0.86
HDLBP-242ENST00000488013 MVKQ03426 396 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 EGR3Q06889 387 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 ST3GAL4Q11206 333 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 ECH1Q13011 328 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 MRPL28Q13084 256 aaKnown RBP9.71□□□□□ -0.86
HDLBP-242ENST00000488013 AQP6Q13520 282 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 ETFDHQ16134 617 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 SGCAQ16586 387 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 SMN1Q16637 294 aaKnown RBP9.71□□□□□ -0.86
HDLBP-242ENST00000488013 FBXL19-AS1Q494R0 122 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 LAIR2Q6ISS4 152 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 KCTD18Q6PI47 426 aaPredicted RBP9.71□□□□□ -0.86
HDLBP-242ENST00000488013 DEGS2Q6QHC5 323 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 TMPRSS11AQ6ZMR5 421 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 AHSA2Q719I0 299 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 BCDIN3DQ7Z5W3 292 aaKnown RBP9.71□□□□□ -0.86
HDLBP-242ENST00000488013 FJX1Q86VR8 437 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 ERI1Q8IV48 349 aaKnown RBP9.71□□□□□ -0.86
HDLBP-242ENST00000488013 ALDH16A1Q8IZ83 802 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 RPRMLQ8N4K4 120 aa9.71□□□□□ -0.86
HDLBP-242ENST00000488013 ZNF610Q8N9Z0 462 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms