RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 PSEN2P49810 448 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 HIST1H2BDP58876 126 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 HIST1H2BCP62807 126 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 MEF2DQ14814 521 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 HIST2H2BEQ16778 126 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.54□□□□□ -0.4
HDAC1-206ENST00000476391 ZNF529Q6P280 563 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 PRSS54Q6PEW0 395 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 TAF8Q7Z7C8 310 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 PRSS35Q8N3Z0 413 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 OR9A4Q8NGU2 314 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 OR13D1Q8NGV5 346 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 ZNF417Q8TAU3 575 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 FGF13Q92913 245 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 HIST1H2BHQ93079 126 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 MR1Q95460 341 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 HIST1H2BNQ99877 126 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 HIST1H2BMQ99879 126 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 MS4A8Q9BY19 250 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 SLC5A7Q9GZV3 580 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 RHBGQ9H310 441 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 MMACHCQ9Y4U1 282 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 TRBV5-5A0A0J9YX44 114 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 C17orf102A2RUQ5 167 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 H0YIZ8 118 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 GMFGO60234 142 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 TMPRSS11DO60235 418 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 ALOX12BO75342 701 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 THBS1P07996 1170 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 SNRPCP09234 159 aaKnown RBP12.53□□□□□ -0.4
HDAC1-206ENST00000476391 F3P13726 295 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 ELNP15502 786 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 SNCAP37840 140 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 MAP3K8P41279 467 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 UCP2P55851 309 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 NKX6-1P78426 367 aaPredicted RBP12.53□□□□□ -0.4
HDAC1-206ENST00000476391 TOMM34Q15785 309 aaPredicted RBP12.53□□□□□ -0.4
HDAC1-206ENST00000476391 DCXRQ7Z4W1 244 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 RANBP3LQ86VV4 465 aaPredicted RBP12.53□□□□□ -0.4
HDAC1-206ENST00000476391 FAM129CQ86XR2 697 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 OR51D1Q8NGF3 324 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 OR2A12Q8NGT7 310 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 ST7LQ8TDW4 575 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 TIFAQ96CG3 184 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 BPIFA2Q96DR5 249 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 ALG14Q96F25 216 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 RBM18Q96H35 190 aaKnown RBP12.53□□□□□ -0.4
HDAC1-206ENST00000476391 STACQ99469 402 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 CERS4Q9HA82 394 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 DNAJB11Q9UBS4 358 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 C13orf42A0A1B0GVH6 325 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 MSGN1A6NI15 193 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 TOX3O15405 576 aaPredicted RBP12.53□□□□□ -0.4
HDAC1-206ENST00000476391 IL2RGP31785 369 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 SERPINF1P36955 418 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 TRA2BP62995 288 aaKnown RBP12.53□□□□□ -0.4
HDAC1-206ENST00000476391 MRPS6P82932 125 aaKnown RBP12.53□□□□□ -0.4
HDAC1-206ENST00000476391 UBE2V2Q15819 145 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 GUK1Q16774 197 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 KCTD9Q7L273 389 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 TMCO2Q7Z6W1 182 aaPredicted RBP12.53□□□□□ -0.4
HDAC1-206ENST00000476391 ZNF280BQ86YH2 543 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 LILRA3Q8N6C8 439 aaPredicted RBP12.53□□□□□ -0.4
HDAC1-206ENST00000476391 OR9A2Q8NGT5 310 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 MUCL1Q96DR8 90 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 C16orf58Q96GQ5 468 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 SLC6A7Q99884 636 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 CD84Q9UIB8 345 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 SERTAD3Q9UJW9 196 aa12.53□□□□□ -0.4
HDAC1-206ENST00000476391 ZNF443Q9Y2A4 671 aaPredicted RBP12.53□□□□□ -0.4
HDAC1-206ENST00000476391 A0A1W2PPC1 479 aa12.52□□□□□ -0.4
HDAC1-206ENST00000476391 TSPAN15O95858 294 aa12.52□□□□□ -0.4
HDAC1-206ENST00000476391 MAS1P04201 325 aa12.52□□□□□ -0.4
HDAC1-206ENST00000476391 LIPCP11150 499 aa12.52□□□□□ -0.4
HDAC1-206ENST00000476391 COTL1Q14019 142 aa12.52□□□□□ -0.4
HDAC1-206ENST00000476391 ARHGAP40Q5TG30 622 aa12.52□□□□□ -0.4
HDAC1-206ENST00000476391 WDR88Q6ZMY6 472 aa12.52□□□□□ -0.4
HDAC1-206ENST00000476391 OR9A1PQ8NGU1 263 aa12.52□□□□□ -0.4
HDAC1-206ENST00000476391 NTNG2Q96CW9 530 aa12.52□□□□□ -0.4
HDAC1-206ENST00000476391 MVB12AQ96EY5 273 aa12.52□□□□□ -0.4
HDAC1-206ENST00000476391 PRAP1Q96NZ9 151 aa12.52□□□□□ -0.4
HDAC1-206ENST00000476391 SCRT1Q9BWW7 348 aa12.52□□□□□ -0.4
HDAC1-206ENST00000476391 OPN3Q9H1Y3 402 aaPredicted RBP12.52□□□□□ -0.4
HDAC1-206ENST00000476391 SAGE1Q9NXZ1 904 aa12.52□□□□□ -0.4
HDAC1-206ENST00000476391 PRODH2Q9UF12 536 aa12.52□□□□□ -0.4
HDAC1-206ENST00000476391 MSRAQ9UJ68 235 aa12.52□□□□□ -0.4
HDAC1-206ENST00000476391 ADAM29Q9UKF5 820 aa12.52□□□□□ -0.4
HDAC1-206ENST00000476391 NUP210LQ5VU65 1888 aa12.52□□□□□ -0.41
HDAC1-206ENST00000476391 LOC100509620A0A075B734 347 aa12.52□□□□□ -0.41
HDAC1-206ENST00000476391 LOC100289279A0A1B0GTE1 492 aa12.52□□□□□ -0.41
HDAC1-206ENST00000476391 TBL1XO60907 577 aa12.52□□□□□ -0.41
HDAC1-206ENST00000476391 GJB5O95377 273 aa12.52□□□□□ -0.41
HDAC1-206ENST00000476391 F13BP05160 661 aa12.52□□□□□ -0.41
HDAC1-206ENST00000476391 SPARCP09486 303 aa12.52□□□□□ -0.41
HDAC1-206ENST00000476391 LINC00614P0C842 121 aa12.52□□□□□ -0.41
HDAC1-206ENST00000476391 EDN3P14138 238 aa12.52□□□□□ -0.41
HDAC1-206ENST00000476391 SLC6A6P31641 620 aa12.52□□□□□ -0.41
HDAC1-206ENST00000476391 PPM1FP49593 454 aaPredicted RBP12.52□□□□□ -0.41
HDAC1-206ENST00000476391 ZNF136P52737 540 aa12.52□□□□□ -0.41
HDAC1-206ENST00000476391 ADAM8P78325 824 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms