RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 TSPAN32Q96QS1 320 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF607Q96SK3 696 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 EPYCQ99645 322 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 SH3GL3Q99963 347 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 CCDC28BQ9BUN5 200 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 SPATA5L1Q9BVQ7 753 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 ULBP2Q9BZM5 246 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF442Q9H7R0 627 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 RNF121Q9H920 327 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 C12orf10Q9HB07 376 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 MYOZ1Q9NP98 299 aaPredicted RBP4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 MRPL39Q9NYK5 338 aaKnown RBP4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 TREM2Q9NZC2 230 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 SELENONQ9NZV5 590 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 LPAR3Q9UBY5 353 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 SLC13A4Q9UKG4 626 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 PRDM4Q9UKN5 801 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 USP22Q9UPT9 525 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 NOX1Q9Y5S8 564 aa4.02□□□□□ -1.77
GTF3C3-208ENST00000455546 A0A1W2PRX2 142 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 UBE2QL1A1L167 161 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 FAM157AC9JC47 383 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 BLOC1S5-TXNDC5H3BN57 136 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 H3BUI4 141 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 M0R233 179 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 PPIHO43447 177 aaKnown RBP4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 RNF13O43567 381 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 SYNGR3O43761 229 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 AKAP8O43823 692 aaKnown RBP4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 FZD7O75084 574 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 ERLIN1O75477 346 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 NCR1O76036 304 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 OR6A2O95222 327 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 TGDSO95455 350 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 RAB36O95755 333 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 ERCC1P07992 297 aaPredicted RBP4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 QDPRP09417 244 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 UMPSP11172 480 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 ITGA2P17301 1181 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 RHCEP18577 417 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 FUT1P19526 365 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 TNFRSF1BP20333 461 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 GLRXP35754 106 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 SRP14P37108 136 aaKnown RBP4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 MAGEB1P43366 347 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 CSNK1A1P48729 337 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 MRPL19P49406 292 aaKnown RBP4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 CHN2P52757 468 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 GALK2Q01415 458 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 RUNX1T1Q06455 604 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 NFYCQ13952 458 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 SQLEQ14534 574 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF74Q16587 644 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 CYP51A1Q16850 503 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 AVPI1Q5T686 147 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 AGBL2Q5U5Z8 902 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 LIPNQ5VXI9 398 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF613Q6PF04 617 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 TTC33Q6PID6 262 aaPredicted RBP4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 C5orf46Q6UWT4 87 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 RINLQ6ZS11 566 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 SLC35D2Q76EJ3 337 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF771Q7L3S4 317 aaPredicted RBP4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 PXKQ7Z7A4 578 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 RANBP3LQ86VV4 465 aaPredicted RBP4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 NKAIN4Q8IVV8 208 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 CCDC36Q8IYA8 594 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 CMTM4Q8IZR5 234 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 SLC22A24Q8N4F4 322 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 SCAIQ8N9R8 606 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 SYT14Q8NB59 555 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 ICA1LQ8NDH6 482 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 ADPRHL1Q8NDY3 354 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 IL17RDQ8NFM7 739 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 OR5J2Q8NH18 312 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 OR6S1Q8NH40 331 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 OR10A6Q8NH74 314 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 CLDND2Q8NHS1 167 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 ADAMTS16Q8TE57 1224 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 DYDC1Q8WWB3 177 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 GTF3AQ92664 365 aaKnown RBP4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 TMEM54Q969K7 222 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 MCHR2Q969V1 340 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 TAMM41Q96BW9 452 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 NEIL1Q96FI4 390 aaPredicted RBP4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 ATP6V1G3Q96LB4 118 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF347Q96SE7 839 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 CGREF1Q99674 301 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 ARHGDIGQ99819 225 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 CPPED1Q9BRF8 314 aaPredicted RBP4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 TMEM43Q9BTV4 400 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 TMEM38AQ9H6F2 299 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 METTL17Q9H7H0 456 aaPredicted RBP4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 B3GAT2Q9NPZ5 323 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 NANSQ9NR45 359 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 ZNF275Q9NSD4 429 aaPredicted RBP4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 TMEM140Q9NV12 185 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 GLTPQ9NZD2 209 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 TAAR3PQ9P1P4 343 aa4.01□□□□□ -1.77
GTF3C3-208ENST00000455546 TESQ9UGI8 421 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms