RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 GIPC3Q8TF64 312 aa13.59□□□□□ -0.23
ACTB-206ENST00000443528 UTP4Q969X6 686 aaKnown RBP13.59□□□□□ -0.23
ACTB-206ENST00000443528 FOXN4Q96NZ1 517 aa13.59□□□□□ -0.23
ACTB-206ENST00000443528 TSSK2Q96PF2 358 aa13.59□□□□□ -0.23
ACTB-206ENST00000443528 NMNAT3Q96T66 252 aa13.59□□□□□ -0.23
ACTB-206ENST00000443528 FEVQ99581 238 aa13.59□□□□□ -0.23
ACTB-206ENST00000443528 NUAK2Q9H093 628 aa13.59□□□□□ -0.23
ACTB-206ENST00000443528 KCNN2Q9H2S1 579 aa13.59□□□□□ -0.23
ACTB-206ENST00000443528 COA3Q9Y2R0 106 aaPredicted RBP13.59□□□□□ -0.23
ACTB-206ENST00000443528 PLCE1Q9P212 2302 aa13.59□□□□□ -0.23
ACTB-206ENST00000443528 HEATR1Q9H583 2144 aaKnown RBP13.58□□□□□ -0.23
ACTB-206ENST00000443528 VPS13CQ709C8 3753 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 ARRDC5A6NEK1 342 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 GNGT2O14610 69 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 IDH3BO43837 385 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 NDUFS7O75251 213 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 KHDRBS3O75525 346 aaKnown RBP13.58□□□□□ -0.24
ACTB-206ENST00000443528 CCL2P13500 99 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 MSR1P21757 451 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 THBS4P35443 961 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 GUCA1AP43080 201 aaPredicted RBP13.58□□□□□ -0.24
ACTB-206ENST00000443528 ATP5J2P56134 94 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 PSG4Q00888 419 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 CCNIQ14094 377 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 DAG1Q14118 895 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 PABPC1L2AQ5JQF8 200 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 SLC35F1Q5T1Q4 408 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 C1orf146Q5VVC0 180 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 RPL13AP3Q6NVV1 102 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 LEG1Q6P5S2 330 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 UGT2A3Q6UWM9 527 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 PRSS57Q6UWY2 283 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 CD300LDQ6UXZ3 194 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 CCDC121Q6ZUS5 278 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 HS3ST5Q8IZT8 346 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 PAQR4Q8N4S7 273 aaPredicted RBP13.58□□□□□ -0.24
ACTB-206ENST00000443528 SLC30A7Q8NEW0 376 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 OR4K13Q8NH42 304 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 TRMT61AQ96FX7 289 aaKnown RBP13.58□□□□□ -0.24
ACTB-206ENST00000443528 SNX18Q96RF0 628 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 ZNF416Q9BWM5 594 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 CACNG6Q9BXT2 260 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 RERGLQ9H628 205 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 ZNF442Q9H7R0 627 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 YY1AP1Q9H869 796 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 NTN4Q9HB63 628 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 EMC7Q9NPA0 242 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 CCNB1IP1Q9NPC3 277 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 DNAJB9Q9UBS3 223 aa13.58□□□□□ -0.24
ACTB-206ENST00000443528 TIPRLO75663 272 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 MPZL1O95297 269 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 SOX14O95416 240 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 OR4A8P0C604 315 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 GSTM3P21266 225 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 APEX1P27695 318 aaKnown RBP13.57□□□□□ -0.24
ACTB-206ENST00000443528 NOS3P29474 1203 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 SERPINF1P36955 418 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 SNTB2Q13425 540 aaKnown RBP13.57□□□□□ -0.24
ACTB-206ENST00000443528 MSMPQ1L6U9 139 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 ZNF362Q5T0B9 420 aaPredicted RBP13.57□□□□□ -0.24
ACTB-206ENST00000443528 OTPQ5XKR4 325 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 YTHDF3Q7Z739 585 aaKnown RBP13.57□□□□□ -0.24
ACTB-206ENST00000443528 JAZF1Q86VZ6 243 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 GLB1L2Q8IW92 636 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 OR6V1Q8N148 313 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 NPEPL1Q8NDH3 523 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 SDR9C7Q8NEX9 313 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 OR52L1Q8NGH7 329 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 AKR7LQ8NHP1 331 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 DDOQ99489 341 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 TMUB1Q9BVT8 246 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 TSSK6Q9BXA6 273 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 OR2H1Q9GZK4 316 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 WNT5BQ9H1J7 359 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 PDP1Q9P0J1 537 aaPredicted RBP13.57□□□□□ -0.24
ACTB-206ENST00000443528 REV1Q9UBZ9 1251 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 GDF2Q9UK05 429 aaPredicted RBP13.57□□□□□ -0.24
ACTB-206ENST00000443528 USF3Q68DE3 2245 aa13.57□□□□□ -0.24
ACTB-206ENST00000443528 IGLV1-36A0A0B4J1U3 117 aa13.56□□□□□ -0.24
ACTB-206ENST00000443528 IQCMA0A1B0GVH7 501 aa13.56□□□□□ -0.24
ACTB-206ENST00000443528 TMEM129A0AVI4 362 aa13.56□□□□□ -0.24
ACTB-206ENST00000443528 OR6C68A6NDL8 312 aa13.56□□□□□ -0.24
ACTB-206ENST00000443528 GPRIN2O60269 458 aa13.56□□□□□ -0.24
ACTB-206ENST00000443528 GPANK1O95872 356 aa13.56□□□□□ -0.24
ACTB-206ENST00000443528 PTHP01270 115 aa13.56□□□□□ -0.24
ACTB-206ENST00000443528 IGHV4-39P01824 125 aa13.56□□□□□ -0.24
ACTB-206ENST00000443528 PRKACGP22612 351 aa13.56□□□□□ -0.24
ACTB-206ENST00000443528 CRABP1P29762 137 aa13.56□□□□□ -0.24
ACTB-206ENST00000443528 HSF2Q03933 536 aa13.56□□□□□ -0.24
ACTB-206ENST00000443528 PLP2Q04941 152 aa13.56□□□□□ -0.24
ACTB-206ENST00000443528 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.56□□□□□ -0.24
ACTB-206ENST00000443528 COX10Q12887 443 aa13.56□□□□□ -0.24
ACTB-206ENST00000443528 EFNB3Q15768 340 aa13.56□□□□□ -0.24
ACTB-206ENST00000443528 LNX2Q8N448 690 aa13.56□□□□□ -0.24
ACTB-206ENST00000443528 OR52E2Q8NGJ4 325 aa13.56□□□□□ -0.24
ACTB-206ENST00000443528 OR4Q3Q8NH05 313 aa13.56□□□□□ -0.24
ACTB-206ENST00000443528 DUS3LQ96G46 650 aaKnown RBP13.56□□□□□ -0.24
ACTB-206ENST00000443528 C1orf198Q9H425 327 aa13.56□□□□□ -0.24
ACTB-206ENST00000443528 FN3KQ9H479 309 aa13.56□□□□□ -0.24
ACTB-206ENST00000443528 SRA1Q9HD15 236 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms