RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 LRRC39Q96DD0 335 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 PANX2Q96RD6 677 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 BLZF1Q9H2G9 400 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 RGCCQ9H4X1 137 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 LY9Q9HBG7 655 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 MRPS30Q9NP92 439 aaKnown RBP2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 NRBP2Q9NSY0 501 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 KCNIP1Q9NZI2 227 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 PSMC3IPQ9P2W1 217 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 XCL2Q9UBD3 114 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 PCYOX1Q9UHG3 505 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 STARD10Q9Y365 291 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 RPAP1Q9BWH6 1393 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 SLC31A2O15432 143 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 CLDN9O95484 217 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 TMEM50AO95807 157 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 TSPAN13O95857 204 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 ALDOBP05062 364 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 SERPINE2P07093 398 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 ERCC1P07992 297 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 RHOXF2BP0C7M4 288 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 UBTFL6P0CB48 400 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 IGHV3-43DP0DP04 118 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 CCNB1P14635 433 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 GSTM3P21266 225 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 U2AF2P26368 475 aaKnown RBP eCLIP2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 CD1CP29017 333 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 LCN1P31025 176 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 NUP62P37198 522 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 ACLYP53396 1101 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 RAB11AP62491 216 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 IRX3P78415 501 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 RAB11BQ15907 218 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 ZNF77Q15935 545 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 HNRNPA1L2Q32P51 320 aaKnown RBP2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 ABCA11PQ4W5N1 156 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 PLCXD3Q63HM9 321 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 DEGS2Q6QHC5 323 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 CENPQQ7L2Z9 268 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 TGIF2LXQ8IUE1 241 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 OR7G2Q8NG99 324 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 RHEBL1Q8TAI7 183 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 UBALD1Q8TB05 177 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 LKAAEAR1Q8TD35 194 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 ACTRT1Q8TDG2 376 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 KIFAP3Q92845 792 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 SLC38A4Q969I6 547 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 UBE2E3Q969T4 207 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 ATP6V1G3Q96LB4 118 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 RHOXF2Q9BQY4 288 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 C20orf24Q9BUV8 137 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 IQCGQ9H095 443 aaKnown RBP2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 IFI27L2Q9H2X8 130 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 ELOVL6Q9H5J4 265 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 ZNF430Q9H8G1 570 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 UGT1A10Q9HAW8 530 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 NMRAL1Q9HBL8 299 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 NT5MQ9NPB1 228 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 IL26Q9NPH9 171 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 GIN1Q9NXP7 522 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 CALYQ9NYX4 217 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 STK38LQ9Y2H1 464 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 NOSIPQ9Y314 301 aaKnown RBP2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 YTHDF2Q9Y5A9 579 aaKnown RBP2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 PEX16Q9Y5Y5 336 aa2.37□□□□□ -2.03
HMGB1P49-201ENST00000418882 COL1A2P08123 1366 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 IQANK1A0A1B0GTG1 560 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 PRSS37A4D1T9 235 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 COLCA2A8K830 154 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 A8MXQ7 604 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 ZNF99A8MXY4 864 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 TRDMT1O14717 391 aaKnown RBP2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 SIVA1O15304 175 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 ENTPD5O75356 428 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 OR2J3O76001 311 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 SCELO95171 688 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 C1orf105O95561 183 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 SNAI1O95863 264 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 PRKACAP17612 351 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 CMA1P23946 247 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 GNA11P29992 359 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 EPS15P42566 896 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 NCBP2P52298 156 aaKnown RBP eCLIP2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 RGS8P57771 180 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 XRCC4Q13426 336 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 MESDQ14696 234 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 ZNF829Q3KNS6 432 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 IGFL1Q6UW32 110 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 ASCL4Q6XD76 172 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 MBOAT1Q6ZNC8 495 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 LINC00173Q6ZV60 143 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 LINC00523Q86TU6 105 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 GABRG1Q8N1C3 465 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 ZADH2Q8N4Q0 377 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 C15orf56Q8N910 161 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 CCDC54Q8NEL0 328 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 TRPV1Q8NER1 839 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 OR4C5Q8NGB2 326 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 OR2L8Q8NGY9 312 aa2.36□□□□□ -2.03
HMGB1P49-201ENST00000418882 OR2G3Q8NGZ4 309 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms