RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651		U3KQK5	164 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	IGHV1-69D	A0A0B4J2H0	117 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	DUXA	A6NLW8	204 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	C3orf84	H3BNL1	204 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	XPNPEP2	O43895	674 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	FZD7	O75084	574 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	SNAP29	O95721	258 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	IGHV1-69	P01742	117 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	MMP7	P09237	267 aa	Predicted RBP	7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	VSIG10L2	P0DP72	767 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	TCP1	P17987	556 aa	Known RBP	7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	LSP1	P33241	339 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	MDH2	P40926	338 aa	Known RBP	7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	PMEL	P40967	661 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	RPL15	P61313	204 aa	Known RBP	7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	SLC7A5	Q01650	507 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	PSG7	Q13046	419 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	HABP2	Q14520	560 aa	Predicted RBP	7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	LSM12	Q3MHD2	195 aa	Known RBP	7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	WDR25	Q64LD2	544 aa	Predicted RBP	7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	WBP2NL	Q6ICG8	309 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	COMTD1	Q86VU5	262 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	LRRC18	Q8N456	261 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	OR2Z1	Q8NG97	314 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	AKR7L	Q8NHP1	331 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	MOAP1	Q96BY2	351 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	TEX37	Q96LM6	180 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	MOGAT1	Q96PD6	335 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	ASCL2	Q99929	193 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	BCL2L14	Q9BZR8	327 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	CNTD2	Q9H8S5	307 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	ZDHHC18	Q9NUE0	388 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	TMEM38B	Q9NVV0	291 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	CTSZ	Q9UBR2	303 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	DNAJB11	Q9UBS4	358 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	FBLN5	Q9UBX5	448 aa		7.09	□□□□□ -1.27
NIF3L1-206	ENST00000416651	CDHR4	A6H8M9	788 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	AIM2	O14862	343 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	AZIN1	O14977	448 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	GLRA3	O75311	464 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	TOX4	O94842	621 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	BPNT1	O95861	308 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	OPN1SW	P03999	348 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	CHRNG	P07510	517 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	NCF2	P19878	526 aa	Predicted RBP	7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	GABRA5	P31644	462 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	PITPNB	P48739	271 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	MAP2K6	P52564	334 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	BID	P55957	195 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	MELK	Q14680	651 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	GSTA3	Q16772	222 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	TBC1D28	Q2M2D7	210 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	ZNF718	Q3SXZ3	478 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	PABPC1L2A	Q5JQF8	200 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	IL23R	Q5VWK5	629 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	KANK2	Q63ZY3	851 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	ZYG11A	Q6WRX3	759 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	GDPGP1	Q6ZNW5	385 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	H1FNT	Q75WM6	255 aa	Predicted RBP	7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	SLC22A9	Q8IVM8	553 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	UEVLD	Q8IX04	471 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	OR4A15	Q8NGL6	344 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	AGR3	Q8TD06	166 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	GATAD2B	Q8WXI9	593 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	TMEM54	Q969K7	222 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	NEIL1	Q96FI4	390 aa	Predicted RBP	7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	METTL2A	Q96IZ6	378 aa	Known RBP	7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	POM121L2	Q96KW2	1035 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	LRR1	Q96L50	414 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	CITED2	Q99967	270 aa	Predicted RBP	7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	MECR	Q9BV79	373 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	ASPN	Q9BXN1	380 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	SIRPD	Q9H106	197 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	GCM1	Q9NP62	436 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	USH1C	Q9Y6N9	552 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651	RYR1	P21817	5038 aa		7.08	□□□□□ -1.28
NIF3L1-206	ENST00000416651		A0A087WUJ7	227 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651		A0A1W2PPM1	405 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651		A0A1W2PRX2	142 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	PLSCR5	A0PG75	271 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	ZNF879	B4DU55	563 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	C11orf98	E9PRG8	122 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	BGLAP	P02818	100 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	GUSB	P08236	651 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	G6PD	P11413	515 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	IL7R	P16871	459 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	UQCRC2	P22695	453 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	CSNK1A1	P48729	337 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	SERPINB9	P50453	376 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	ARF6	P62330	175 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	ELF3	P78545	371 aa	Predicted RBP	7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	LY6E	Q16553	131 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	TTMP	Q5BVD1	217 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	XKR7	Q5GH72	579 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	ATAD3B	Q5T9A4	648 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	MBNL2	Q5VZF2	373 aa	Known RBP	7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	PIWIL3	Q7Z3Z3	882 aa	Known RBP	7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	TWIST2	Q8WVJ9	160 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	C17orf50	Q8WW18	174 aa		7.07	□□□□□ -1.28
NIF3L1-206	ENST00000416651	RBMXL1	Q96E39	390 aa	Known RBP	7.07	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 92 ms