RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 CARD17Q5XLA6 110 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 SPINK14Q6IE38 97 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 DCXRQ7Z4W1 244 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 SOSTQ9BQB4 213 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 UTP23Q9BRU9 249 aaKnown RBP16.9■□□□□ 0.3
USP39-202ENST00000409025 ZCCHC4Q9H5U6 513 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 B3GAT2Q9NPZ5 323 aa16.9■□□□□ 0.3
USP39-202ENST00000409025 BOKQ9UMX3 212 aaPredicted RBP16.9■□□□□ 0.3
USP39-202ENST00000409025 MRPS18CQ9Y3D5 142 aaKnown RBP16.9■□□□□ 0.3
USP39-202ENST00000409025 AK6Q9Y3D8 172 aaKnown RBP16.9■□□□□ 0.3
USP39-202ENST00000409025 KNTC1P50748 2209 aa16.89■□□□□ 0.29
USP39-202ENST00000409025 CACNA1HO95180 2353 aa16.89■□□□□ 0.29
USP39-202ENST00000409025 A0A0J9YW62 118 aa16.89■□□□□ 0.29
USP39-202ENST00000409025 TRABD2BA6NFA1 517 aa16.89■□□□□ 0.29
USP39-202ENST00000409025 ZNF254O75437 659 aa16.89■□□□□ 0.29
USP39-202ENST00000409025 RFPL3SP0C7P2 107 aa16.89■□□□□ 0.29
USP39-202ENST00000409025 SLC2A2P11168 524 aaPredicted RBP16.89■□□□□ 0.29
USP39-202ENST00000409025 EPXP11678 715 aa16.89■□□□□ 0.29
USP39-202ENST00000409025 IL7P13232 177 aa16.89■□□□□ 0.29
USP39-202ENST00000409025 RBMS1P29558 406 aaKnown RBP16.89■□□□□ 0.29
USP39-202ENST00000409025 KIR3DL2P43630 455 aa16.89■□□□□ 0.29
USP39-202ENST00000409025 CDC20Q12834 499 aa16.89■□□□□ 0.29
USP39-202ENST00000409025 BAK1Q16611 211 aa16.89■□□□□ 0.29
USP39-202ENST00000409025 WDR38Q5JTN6 314 aa16.89■□□□□ 0.29
USP39-202ENST00000409025 OR7E24Q6IFN5 339 aa16.89■□□□□ 0.29
USP39-202ENST00000409025 SYT9Q86SS6 491 aa16.89■□□□□ 0.29
USP39-202ENST00000409025 LRRC28Q86X40 367 aaPredicted RBP16.89■□□□□ 0.29
USP39-202ENST00000409025 LINC00346Q8IVM7 164 aa16.89■□□□□ 0.29
USP39-202ENST00000409025 GPR148Q8TDV2 347 aa16.89■□□□□ 0.29
USP39-202ENST00000409025 C11orf40Q8WZ69 217 aa16.89■□□□□ 0.29
USP39-202ENST00000409025 SLITRK2Q9H156 845 aa16.89■□□□□ 0.29
USP39-202ENST00000409025 ZFP64Q9NPA5 681 aa16.89■□□□□ 0.29
USP39-202ENST00000409025 LRP12Q9Y561 859 aa16.89■□□□□ 0.29
USP39-202ENST00000409025 A0A1W2PPL8 197 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.88■□□□□ 0.29
USP39-202ENST00000409025 TNFRSF10AO00220 468 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 TNFSF11O14788 317 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 TRAPPC6AO75865 159 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 ELK1P19419 428 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 APEX1P27695 318 aaKnown RBP16.88■□□□□ 0.29
USP39-202ENST00000409025 MAGEB1P43366 347 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 CLDN17P56750 224 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 IL18Q14116 193 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 TMPRSS12Q86WS5 348 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 SAMD12Q8N8I0 201 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 CLEC1AQ8NC01 280 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 PRSS33Q8NF86 280 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 SETD6Q8TBK2 473 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 TRMT10AQ8TBZ6 339 aaKnown RBP16.88■□□□□ 0.29
USP39-202ENST00000409025 ST7LQ8TDW4 575 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 ABRACLQ9P1F3 81 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 FUOMA2VDF0 154 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 GPR171O14626 319 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 DNPH1O43598 174 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 APOA1P02647 267 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 NR2C1P13056 603 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 GDF1P27539 372 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 SOX2P48431 317 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 POU4F3Q15319 338 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 C11orf91Q3C1V1 193 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 SLC25A47Q6Q0C1 308 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 THRSPQ92748 146 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 MCHR2Q969V1 340 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 ORAI1Q96D31 301 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 SFXN2Q96NB2 322 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 FAM173AQ9BQD7 235 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 SLC25A18Q9H1K4 315 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 PPP1R3EQ9H7J1 279 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 TCF7L1Q9HCS4 588 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 MALT1Q9UDY8 824 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 GTF2A1LQ9UNN4 478 aa16.88■□□□□ 0.29
USP39-202ENST00000409025 NPIPA2E9PIF3 369 aa16.87■□□□□ 0.29
USP39-202ENST00000409025 NPIPA3F8WFD2 350 aa16.87■□□□□ 0.29
USP39-202ENST00000409025 NEURL1O76050 574 aa16.87■□□□□ 0.29
USP39-202ENST00000409025 WNT11O96014 354 aa16.87■□□□□ 0.29
USP39-202ENST00000409025 RAF1P04049 648 aa16.87■□□□□ 0.29
USP39-202ENST00000409025 ATF1P18846 271 aa16.87■□□□□ 0.29
USP39-202ENST00000409025 TALDO1P37837 337 aa16.87■□□□□ 0.29
USP39-202ENST00000409025 BCAP31P51572 246 aa16.87■□□□□ 0.29
USP39-202ENST00000409025 AGFG1P52594 562 aaKnown RBP16.87■□□□□ 0.29
USP39-202ENST00000409025 SCN1BQ07699 218 aa16.87■□□□□ 0.29
USP39-202ENST00000409025 MADCAM1Q13477 382 aa16.87■□□□□ 0.29
USP39-202ENST00000409025 HIST3H3Q16695 136 aa16.87■□□□□ 0.29
USP39-202ENST00000409025 ODF4Q2M2E3 257 aa16.87■□□□□ 0.29
USP39-202ENST00000409025 DEGS2Q6QHC5 323 aa16.87■□□□□ 0.29
USP39-202ENST00000409025 CREB3L2Q70SY1 520 aa16.87■□□□□ 0.29
USP39-202ENST00000409025 HTRA1Q92743 480 aa16.87■□□□□ 0.29
USP39-202ENST00000409025 OR2B2Q9GZK3 357 aa16.87■□□□□ 0.29
USP39-202ENST00000409025 SEC61A2Q9H9S3 476 aa16.87■□□□□ 0.29
USP39-202ENST00000409025 CYSLTR2Q9NS75 346 aa16.87■□□□□ 0.29
USP39-202ENST00000409025 EXTL2Q9UBQ6 330 aa16.87■□□□□ 0.29
USP39-202ENST00000409025 IGHV3-15A0A0B4J1V0 119 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 PINLYPA6NC86 204 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 ANKRD61A6NGH8 418 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 PNPP00491 289 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 QDPRP09417 244 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 RAC3P60763 192 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 WIPI1Q5MNZ9 446 aaPredicted RBP16.86■□□□□ 0.29
USP39-202ENST00000409025 CATSPERDQ86XM0 798 aa16.86■□□□□ 0.29
USP39-202ENST00000409025 RDH10Q8IZV5 341 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms