RNA–Protein interactions for RNA: ENST00000395145.3

CLDN3-201, Transcript of claudin 3, humanhuman

APPRIS P1 BASIC

Gene CLDN3, Length 1,274 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3-201ENST00000395145 CXXC4Q9H2H0 198 aa17.69■□□□□ 0.42
CLDN3-201ENST00000395145 ZNF556Q9HAH1 456 aa17.69■□□□□ 0.42
CLDN3-201ENST00000395145 ATP23Q9Y6H3 246 aa17.69■□□□□ 0.42
CLDN3-201ENST00000395145 ARID1AO14497 2285 aa17.69■□□□□ 0.42
CLDN3-201ENST00000395145 PRRC2AP48634 2157 aaKnown RBP17.69■□□□□ 0.42
CLDN3-201ENST00000395145 SOD3P08294 240 aa17.68■□□□□ 0.42
CLDN3-201ENST00000395145 LAP3P28838 519 aa17.68■□□□□ 0.42
CLDN3-201ENST00000395145 RAB39AQ14964 217 aa17.68■□□□□ 0.42
CLDN3-201ENST00000395145 TESK1Q15569 626 aa17.68■□□□□ 0.42
CLDN3-201ENST00000395145 ZNF362Q5T0B9 420 aaPredicted RBP17.68■□□□□ 0.42
CLDN3-201ENST00000395145 SLC35F1Q5T1Q4 408 aa17.68■□□□□ 0.42
CLDN3-201ENST00000395145 ZNF544Q6NX49 715 aa17.68■□□□□ 0.42
CLDN3-201ENST00000395145 DNM1P34Q6PK57 102 aa17.68■□□□□ 0.42
CLDN3-201ENST00000395145 GLB1L2Q8IW92 636 aa17.68■□□□□ 0.42
CLDN3-201ENST00000395145 SDR9C7Q8NEX9 313 aa17.68■□□□□ 0.42
CLDN3-201ENST00000395145 NUP37Q8NFH4 326 aa17.68■□□□□ 0.42
CLDN3-201ENST00000395145 OR52E2Q8NGJ4 325 aa17.68■□□□□ 0.42
CLDN3-201ENST00000395145 OR4Q3Q8NH05 313 aa17.68■□□□□ 0.42
CLDN3-201ENST00000395145 DNAJC9Q8WXX5 260 aa17.68■□□□□ 0.42
CLDN3-201ENST00000395145 FBXO17Q96EF6 278 aa17.68■□□□□ 0.42
CLDN3-201ENST00000395145 RAB3IPQ96QF0 476 aaPredicted RBP17.68■□□□□ 0.42
CLDN3-201ENST00000395145 DDOQ99489 341 aa17.68■□□□□ 0.42
CLDN3-201ENST00000395145 WACQ9BTA9 647 aa17.68■□□□□ 0.42
CLDN3-201ENST00000395145 RACGAP1Q9H0H5 632 aa17.68■□□□□ 0.42
CLDN3-201ENST00000395145 C1orf198Q9H425 327 aa17.68■□□□□ 0.42
CLDN3-201ENST00000395145 RNF121Q9H920 327 aa17.68■□□□□ 0.42
CLDN3-201ENST00000395145 FAIMQ9NVQ4 179 aa17.68■□□□□ 0.42
CLDN3-201ENST00000395145 RTTNQ86VV8 2226 aa17.67■□□□□ 0.42
CLDN3-201ENST00000395145 IGLV1-36A0A0B4J1U3 117 aa17.67■□□□□ 0.42
CLDN3-201ENST00000395145 DCTN6O00399 190 aa17.67■□□□□ 0.42
CLDN3-201ENST00000395145 SCG5P05408 212 aa17.67■□□□□ 0.42
CLDN3-201ENST00000395145 ZNF35P13682 527 aa17.67■□□□□ 0.42
CLDN3-201ENST00000395145 HGFACQ04756 655 aa17.67■□□□□ 0.42
CLDN3-201ENST00000395145 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.67■□□□□ 0.42
CLDN3-201ENST00000395145 ENDOGQ14249 297 aaKnown RBP17.67■□□□□ 0.42
CLDN3-201ENST00000395145 SLC36A3Q495N2 470 aa17.67■□□□□ 0.42
CLDN3-201ENST00000395145 FAHD1Q6P587 224 aa17.67■□□□□ 0.42
CLDN3-201ENST00000395145 SYT9Q86SS6 491 aa17.67■□□□□ 0.42
CLDN3-201ENST00000395145 ZBTB46Q86UZ6 589 aa17.67■□□□□ 0.42
CLDN3-201ENST00000395145 HIPK1Q86Z02 1210 aa17.67■□□□□ 0.42
CLDN3-201ENST00000395145 OR6V1Q8N148 313 aa17.67■□□□□ 0.42
CLDN3-201ENST00000395145 TEX47Q8TBZ9 253 aa17.67■□□□□ 0.42
CLDN3-201ENST00000395145 TMEM171Q8WVE6 324 aa17.67■□□□□ 0.42
CLDN3-201ENST00000395145 LRTOMTQ8WZ04 291 aa17.67■□□□□ 0.42
CLDN3-201ENST00000395145 TSSK2Q96PF2 358 aa17.67■□□□□ 0.42
CLDN3-201ENST00000395145 CCNB1IP1Q9NPC3 277 aa17.67■□□□□ 0.42
CLDN3-201ENST00000395145 COA3Q9Y2R0 106 aaPredicted RBP17.67■□□□□ 0.42
CLDN3-201ENST00000395145 FKBP7Q9Y680 259 aa17.67■□□□□ 0.42
CLDN3-201ENST00000395145 USF3Q68DE3 2245 aa17.66■□□□□ 0.42
CLDN3-201ENST00000395145 OR6C68A6NDL8 312 aa17.66■□□□□ 0.42
CLDN3-201ENST00000395145 OVOL3O00110 214 aa17.66■□□□□ 0.42
CLDN3-201ENST00000395145 PTHP01270 115 aa17.66■□□□□ 0.42
CLDN3-201ENST00000395145 OSMP13725 252 aa17.66■□□□□ 0.42
CLDN3-201ENST00000395145 PAX1P15863 534 aa17.66■□□□□ 0.42
CLDN3-201ENST00000395145 ZNF32P17041 273 aa17.66■□□□□ 0.42
CLDN3-201ENST00000395145 TTKP33981 857 aa17.66■□□□□ 0.42
CLDN3-201ENST00000395145 ART1P52961 327 aa17.66■□□□□ 0.42
CLDN3-201ENST00000395145 PCBD1P61457 104 aa17.66■□□□□ 0.42
CLDN3-201ENST00000395145 LSM6P62312 80 aaKnown RBP17.66■□□□□ 0.42
CLDN3-201ENST00000395145 KCNMB1Q16558 191 aa17.66■□□□□ 0.42
CLDN3-201ENST00000395145 ZFP1Q6P2D0 407 aa17.66■□□□□ 0.42
CLDN3-201ENST00000395145 AMIGO2Q86SJ2 522 aa17.66■□□□□ 0.42
CLDN3-201ENST00000395145 ATG16L2Q8NAA4 619 aa17.66■□□□□ 0.42
CLDN3-201ENST00000395145 TRAF4Q9BUZ4 470 aaPredicted RBP17.66■□□□□ 0.42
CLDN3-201ENST00000395145 ZNF416Q9BWM5 594 aa17.66■□□□□ 0.42
CLDN3-201ENST00000395145 RERGLQ9H628 205 aa17.66■□□□□ 0.42
CLDN3-201ENST00000395145 RPRD1BQ9NQG5 326 aaKnown RBP17.66■□□□□ 0.42
CLDN3-201ENST00000395145 KLHL21Q9UJP4 597 aa17.66■□□□□ 0.42
CLDN3-201ENST00000395145 ITGB1BP2Q9UKP3 347 aa17.66■□□□□ 0.42
CLDN3-201ENST00000395145 B9D1Q9UPM9 204 aa17.66■□□□□ 0.42
CLDN3-201ENST00000395145 LAMP3Q9UQV4 416 aa17.66■□□□□ 0.42
CLDN3-201ENST00000395145 C12orf71A8MTZ7 269 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 H3BN98 237 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 CD8AP01732 235 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 GAAP10253 952 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 APOBEC3AP31941 199 aaPredicted RBP17.65■□□□□ 0.42
CLDN3-201ENST00000395145 GRK5P34947 590 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 FABP6P51161 128 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 NKX6-1P78426 367 aaPredicted RBP17.65■□□□□ 0.42
CLDN3-201ENST00000395145 PSG4Q00888 419 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 PLP2Q04941 152 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 PABPC1L2AQ5JQF8 200 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 AGAP6Q5VW22 663 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 UGT2A3Q6UWM9 527 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 C10orf67Q8IYJ2 551 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 FBXL14Q8N1E6 418 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 LRRC75A-AS1Q8N1F1 130 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 SVOPLQ8N434 492 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 SLC30A7Q8NEW0 376 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 PYDC1Q8WXC3 89 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 CENPNQ96H22 339 aaPredicted RBP17.65■□□□□ 0.42
CLDN3-201ENST00000395145 OR2H1Q9GZK4 316 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 GABARAPL1Q9H0R8 117 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 CXorf56Q9H5V9 222 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 ZNF442Q9H7R0 627 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 SRA1Q9HD15 236 aaKnown RBP17.65■□□□□ 0.42
CLDN3-201ENST00000395145 EMC7Q9NPA0 242 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 CA10Q9NS85 328 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 TIMM10BQ9Y5J6 103 aa17.65■□□□□ 0.42
CLDN3-201ENST00000395145 IQCMA0A1B0GVH7 501 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms