RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ZNF747Q9BV97 191 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 OR2J1Q9GZK6 312 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 KCNN2Q9H2S1 579 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 NANOGQ9H9S0 305 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 SMURF2Q9HAU4 748 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 NTN4Q9HB63 628 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 CCNB1IP1Q9NPC3 277 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 INIPQ9NRY2 104 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 C20orf141Q9NUB4 165 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 DDX28Q9NUL7 540 aaKnown RBP11.67□□□□□ -0.54
CXCL12-202ENST00000374426 DCAF16Q9NXF7 216 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 UBAP1Q9NZ09 502 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 NOTCH1P46531 2555 aa11.67□□□□□ -0.54
CXCL12-202ENST00000374426 PPIAL4EA0A075B759 164 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 PPIAL4CA0A0B4J2A2 164 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 PPIAL4DF5H284 164 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 OR7A10O76100 309 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 TSPAN19P0C672 248 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 PPIAL4FP0DN26 164 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 HKR1P10072 659 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 RBMXP38159 391 aaKnown RBP11.66□□□□□ -0.54
CXCL12-202ENST00000374426 ERVK-25P63136 954 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 PSG4Q00888 419 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 SLC3A1Q07837 685 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 HDDC2Q7Z4H3 204 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 NKAIN4Q8IVV8 208 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 SLC30A8Q8IWU4 369 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 SIGLECL1Q8N7X8 197 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 DEFB108BQ8NET1 73 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 MOSPD2Q8NHP6 518 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 LRRC8CQ8TDW0 803 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 TMEM255BQ8WV15 326 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 GEMIN6Q8WXD5 167 aaKnown RBP11.66□□□□□ -0.54
CXCL12-202ENST00000374426 NSMAFQ92636 917 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 HDAC2Q92769 488 aaKnown RBP11.66□□□□□ -0.54
CXCL12-202ENST00000374426 LRRC58Q96CX6 371 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 EGLN1Q9GZT9 426 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 MMP26Q9NRE1 261 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 EIF3KQ9UBQ5 218 aaKnown RBP11.66□□□□□ -0.54
CXCL12-202ENST00000374426 KLHL21Q9UJP4 597 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 NDUFAF1Q9Y375 327 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 VWFP04275 2813 aa11.66□□□□□ -0.54
CXCL12-202ENST00000374426 TANC2Q9HCD6 1990 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 NPIPB13A6NJU9 1138 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 NPIPB4C9JG80 1138 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 ICMTO60725 284 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 NGFP01138 241 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 IGF2P01344 180 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 CD55P08174 381 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 RBM34P42696 430 aaKnown RBP11.65□□□□□ -0.54
CXCL12-202ENST00000374426 GDI2P50395 445 aaKnown RBP11.65□□□□□ -0.54
CXCL12-202ENST00000374426 GZMMP51124 257 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 PPP1CBP62140 327 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 FOXL1Q12952 345 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 LAPTM4AQ15012 233 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 SGCAQ16586 387 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 FAM27BQ5VT28 67 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 SLC25A47Q6Q0C1 308 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 SHISA2Q6UWI4 295 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 UNQ6126/PRO20091Q6UXV3 157 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 TREML1Q86YW5 311 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 OR10A6Q8NH74 314 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 ABHD4Q8TB40 342 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 ST7LQ8TDW4 575 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 SLC26A7Q8TE54 656 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 LIPHQ8WWY8 451 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 SGTBQ96EQ0 304 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 C1orf147Q96MC9 270 aaPredicted RBP11.65□□□□□ -0.54
CXCL12-202ENST00000374426 C1QTNF5Q9BXJ0 243 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 OR2H1Q9GZK4 316 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 WNT5BQ9H1J7 359 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 RABEP2Q9H5N1 569 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 ZNF696Q9H7X3 374 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 MSL2Q9HCI7 577 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 NPHS2Q9NP85 383 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 CYSLTR2Q9NS75 346 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 STX18Q9P2W9 335 aaKnown RBP11.65□□□□□ -0.54
CXCL12-202ENST00000374426 PURGQ9UJV8 347 aaKnown RBP11.65□□□□□ -0.54
CXCL12-202ENST00000374426 ZDHHC8Q9ULC8 765 aa11.65□□□□□ -0.54
CXCL12-202ENST00000374426 CMYA5Q8N3K9 4069 aa11.65□□□□□ -0.55
CXCL12-202ENST00000374426 ANGPT2O15123 496 aa11.64□□□□□ -0.55
CXCL12-202ENST00000374426 FOXH1O75593 365 aa11.64□□□□□ -0.55
CXCL12-202ENST00000374426 IGHV2-70P01814 119 aa11.64□□□□□ -0.55
CXCL12-202ENST00000374426 TNFRSF1BP20333 461 aa11.64□□□□□ -0.55
CXCL12-202ENST00000374426 PRTN3P24158 256 aa11.64□□□□□ -0.55
CXCL12-202ENST00000374426 LIPAP38571 399 aa11.64□□□□□ -0.55
CXCL12-202ENST00000374426 CD47Q08722 323 aa11.64□□□□□ -0.55
CXCL12-202ENST00000374426 VMACQ2NL98 169 aa11.64□□□□□ -0.55
CXCL12-202ENST00000374426 KLF17Q5JT82 389 aaPredicted RBP11.64□□□□□ -0.55
CXCL12-202ENST00000374426 INTS11Q5TA45 600 aaKnown RBP11.64□□□□□ -0.55
CXCL12-202ENST00000374426 RBMS3Q6XE24 437 aaKnown RBP11.64□□□□□ -0.55
CXCL12-202ENST00000374426 CCDC80Q76M96 950 aa11.64□□□□□ -0.55
CXCL12-202ENST00000374426 DOK3Q7L591 496 aa11.64□□□□□ -0.55
CXCL12-202ENST00000374426 C1orf174Q8IYL3 243 aa11.64□□□□□ -0.55
CXCL12-202ENST00000374426 CLDN22Q8N7P3 220 aa11.64□□□□□ -0.55
CXCL12-202ENST00000374426 TMEM239Q8WW34 195 aa11.64□□□□□ -0.55
CXCL12-202ENST00000374426 RASSF5Q8WWW0 418 aa11.64□□□□□ -0.55
CXCL12-202ENST00000374426 POP5Q969H6 163 aaKnown RBP11.64□□□□□ -0.55
CXCL12-202ENST00000374426 DUX5Q96PT3 197 aa11.64□□□□□ -0.55
CXCL12-202ENST00000374426 TXNIPQ9H3M7 391 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms