RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 SFXN2Q96NB2 322 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 ZFP3Q96NJ6 502 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 NEDD4LQ96PU5 975 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 TMEM246Q9BRR3 403 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 TMED9Q9BVK6 235 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 HDHD5Q9BXW7 423 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 TBL1XR1Q9BZK7 514 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 PLA2G12AQ9BZM1 189 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 HDHD2Q9H0R4 259 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 DPAGT1Q9H3H5 408 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 ZCCHC4Q9H5U6 513 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 CALHM2Q9HA72 323 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 TMEM165Q9HC07 324 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 NPDC1Q9NQX5 325 aaPredicted RBP9.29□□□□□ -0.92
COL5A1-202ENST00000371820 TAS2R10Q9NYW0 307 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 ZNF629Q9UEG4 869 aaPredicted RBP9.29□□□□□ -0.92
COL5A1-202ENST00000371820 FOXD3Q9UJU5 478 aaPredicted RBP9.29□□□□□ -0.92
COL5A1-202ENST00000371820 SLC7A7Q9UM01 511 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 CARD8Q9Y2G2 431 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 NUBP2Q9Y5Y2 271 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 HCFC1P51610 2035 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 MTORP42345 2549 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 NCKAP5O14513 1909 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 MED13LQ71F56 2210 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 CDHR4A6H8M9 788 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 NKX2-6A6NCS4 301 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 C2orf72A6NCS6 295 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 C12orf71A8MTZ7 269 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 ZNF879B4DU55 563 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 BHLHE40O14503 412 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 SULT1B1O43704 296 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 CHP2O43745 196 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 HPGDSO60760 199 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 PTP4A3O75365 173 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 NKX2-2O95096 273 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 ECDO95905 644 aaPredicted RBP9.28□□□□□ -0.92
COL5A1-202ENST00000371820 CLEC2LP0C7M8 214 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 PSKH1P11801 424 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 PRG2P13727 222 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 AHCYP23526 432 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 DPP4P27487 766 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 GABRA3P34903 492 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 ADH7P40394 386 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 AP3S2P59780 193 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 MRPS10P82664 201 aaKnown RBP9.28□□□□□ -0.92
COL5A1-202ENST00000371820 C17orf67Q0P5P2 114 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 DYRK1AQ13627 763 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 MAPK14Q16539 360 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 CARTPTQ16568 116 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 YIF1BQ5BJH7 314 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 CLEC12AQ5QGZ9 265 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 DCST2Q5T1A1 773 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 EEF1A1P5Q5VTE0 462 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 ZNF836Q6ZNA1 936 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 CHMP1BQ7LBR1 199 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 BCDIN3DQ7Z5W3 292 aaKnown RBP9.28□□□□□ -0.92
COL5A1-202ENST00000371820 LUZP2Q86TE4 346 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 DMRTC2Q8IXT2 367 aaPredicted RBP9.28□□□□□ -0.92
COL5A1-202ENST00000371820 LSMEM1Q8N8F7 131 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 SLC16A11Q8NCK7 471 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 OR4F15Q8NGB8 312 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 OR4N2Q8NGD1 307 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 OR51G2Q8NGK0 314 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 ABHD4Q8TB40 342 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 FANK1Q8TC84 345 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 UBASH3BQ8TF42 649 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 CDS1Q92903 461 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 BPIFA2Q96DR5 249 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 WDYHV1Q96HA8 205 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 TRIB1Q96RU8 372 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 MNTQ99583 582 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 TM9SF2Q99805 663 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 WFDC6Q9BQY6 131 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 ZNF649Q9BS31 505 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 THAP7Q9BT49 309 aaPredicted RBP9.28□□□□□ -0.92
COL5A1-202ENST00000371820 G6PC3Q9BUM1 346 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 IFT27Q9BW83 186 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 RSPO3Q9BXY4 272 aaPredicted RBP9.28□□□□□ -0.92
COL5A1-202ENST00000371820 SLC19A3Q9BZV2 496 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 EQTNQ9NQ60 294 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 HINT3Q9NQE9 182 aaKnown RBP9.28□□□□□ -0.92
COL5A1-202ENST00000371820 EXTL2Q9UBQ6 330 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 RPS6KB2Q9UBS0 482 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 KCNN3Q9UGI6 736 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 KCNE3Q9Y6H6 103 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 NINQ8N4C6 2090 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 ZNF407Q9C0G0 2248 aa9.28□□□□□ -0.92
COL5A1-202ENST00000371820 SETD2Q9BYW2 2564 aaPredicted RBP9.27□□□□□ -0.92
COL5A1-202ENST00000371820 INTS1Q8N201 2190 aaKnown RBP9.27□□□□□ -0.92
COL5A1-202ENST00000371820 ARHGAP21Q5T5U3 1957 aa9.27□□□□□ -0.93
COL5A1-202ENST00000371820 A0A1B0GVI7 797 aa9.27□□□□□ -0.93
COL5A1-202ENST00000371820 MBD3L4A6NDZ8 208 aaPredicted RBP9.27□□□□□ -0.93
COL5A1-202ENST00000371820 MBD3L3A6NE82 208 aaPredicted RBP9.27□□□□□ -0.93
COL5A1-202ENST00000371820 MBD3L5A6NJ08 208 aaPredicted RBP9.27□□□□□ -0.93
COL5A1-202ENST00000371820 NOTOA8MTQ0 251 aa9.27□□□□□ -0.93
COL5A1-202ENST00000371820 IMPA2O14732 288 aa9.27□□□□□ -0.93
COL5A1-202ENST00000371820 OGG1O15527 345 aa9.27□□□□□ -0.93
COL5A1-202ENST00000371820 FADS1O60427 444 aa9.27□□□□□ -0.93
COL5A1-202ENST00000371820 UBL3O95164 117 aa9.27□□□□□ -0.93
COL5A1-202ENST00000371820 IL18BPO95998 194 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms