RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 FAM173AQ9BQD7 235 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 NUDT9Q9BW91 350 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 PRDM7Q9NQW5 492 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 TMEM100Q9NV29 134 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 OR14J1Q9UGF5 321 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF391Q9UJN7 358 aa4.44□□□□□ -1.7
SCN3A-202ENST00000360093 LSM5Q9Y4Y9 91 aaKnown RBP4.44□□□□□ -1.7
SCN3A-202ENST00000360093 TCRBV5S2A0A599 114 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF891A8MT65 544 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 STK17BO94768 372 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 GALNSP34059 522 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 PTGER4P35408 488 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 RBP2P50120 134 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 RPS27AP62979 156 aaKnown RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 UBA52P62987 128 aaKnown RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 TNK1Q13470 666 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 SPCS2Q15005 226 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 RNPS1Q15287 305 aaKnown RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 MAFIPQ8WZ33 124 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 BORCS7Q96B45 105 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 ANKRD9Q96BM1 317 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF845Q96IR2 970 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 MFFQ9GZY8 342 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 HIPK2Q9H2X6 1198 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 TRAV17A0A0B4J275 112 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 A0A1W2PQ09 198 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 C17orf112F2Z3M2 114 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 H7C1C5 153 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 K7EQS6 105 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 GLAP06280 429 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 SBK3P0C264 359 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 PNLIPP16233 465 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 HIST1H1CP16403 213 aaKnown RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 DRD3P35462 400 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 BTG2P78543 158 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 ESCO2Q56NI9 601 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 RIMKLAQ8IXN7 391 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF687Q8N1G0 1237 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 FGGYQ96C11 551 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 KIRREL1Q96J84 757 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF285Q96NJ3 590 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 PLK3Q9H4B4 646 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF346Q9UL40 294 aaKnown RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 CACNA1CQ13936 2221 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 A8MV72 311 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 NKX2-2O95096 273 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 CD82P27701 267 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 ARRB2P32121 409 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 NXPH1P58417 271 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 GLYATL3Q5SZD4 288 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 TMEM215Q68D42 235 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 ABI3BPQ7Z7G0 1075 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 LINC00346Q8IVM7 164 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 C1orf87Q8N0U7 546 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 NRSN2Q9GZP1 204 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 ZCCHC4Q9H5U6 513 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 KCNIP2Q9NS61 270 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 ASB1Q9Y576 335 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 KRBA1A5PL33 1030 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 TRIM64CA6NLI5 447 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 P2RY10O00398 339 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 ARPC5O15511 151 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 TNFSF14O43557 240 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 ATP6V1G1O75348 118 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 OR2J2O76002 312 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 SPI1P17947 270 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 TBPP20226 339 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 EPHA8P29322 1005 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 IDO2Q6ZQW0 420 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 CALHM3Q86XJ0 350 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 ANKRD53Q8N9V6 530 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 LGALS14Q8TCE9 139 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 SLAMF6Q96DU3 332 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 CNRIP1Q96F85 164 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 FOXN4Q96NZ1 517 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 GPR87Q9BY21 358 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 SH3BGRL2Q9UJC5 107 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 ARPC4-TTLL3A0A0A6YYG9 625 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 IGHV3-20A0A0C4DH32 117 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 I6L893 689 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 PIP5K1CO60331 668 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 SELENOFO60613 162 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 BMP1P13497 986 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 RPL18Q07020 188 aaKnown RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 ACKR1Q16570 336 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 TATDN3Q17R31 274 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 Q6ZPB1 254 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 Q6ZS52 159 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 YRDCQ86U90 279 aaKnown RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 LACC1Q8IV20 430 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 OR14A2Q96R54 314 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 DPCDQ9BVM2 203 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 PPIL3Q9H2H8 161 aaKnown RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 RCE1Q9Y256 329 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 BTBD17A6NE02 478 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 TRABD2BA6NFA1 517 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 ZNF705EA8MWA4 302 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-202ENST00000360093 A8MXE2 369 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 DEGS1O15121 323 aa4.43□□□□□ -1.7
SCN3A-202ENST00000360093 PMS2P2O95744 297 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms