RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 RASSF6Q6ZTQ3 369 aa16.63■□□□□ 0.25
SYNE4-202ENST00000340477 LURAP1LQ8IV03 231 aa16.63■□□□□ 0.25
SYNE4-202ENST00000340477 ALDH16A1Q8IZ83 802 aa16.63■□□□□ 0.25
SYNE4-202ENST00000340477 NABP1Q96AH0 204 aa16.63■□□□□ 0.25
SYNE4-202ENST00000340477 FBXO17Q96EF6 278 aa16.63■□□□□ 0.25
SYNE4-202ENST00000340477 CACNG6Q9BXT2 260 aa16.63■□□□□ 0.25
SYNE4-202ENST00000340477 DGCR6LQ9BY27 220 aa16.63■□□□□ 0.25
SYNE4-202ENST00000340477 VNN3Q9NY84 501 aa16.63■□□□□ 0.25
SYNE4-202ENST00000340477 ARRDC5A6NEK1 342 aa16.62■□□□□ 0.25
SYNE4-202ENST00000340477 C12orf71A8MTZ7 269 aa16.62■□□□□ 0.25
SYNE4-202ENST00000340477 SLC16A7O60669 478 aa16.62■□□□□ 0.25
SYNE4-202ENST00000340477 GASTP01350 101 aa16.62■□□□□ 0.25
SYNE4-202ENST00000340477 OR4A8P0C604 315 aa16.62■□□□□ 0.25
SYNE4-202ENST00000340477 LAP3P28838 519 aa16.62■□□□□ 0.25
SYNE4-202ENST00000340477 SERPINF1P36955 418 aa16.62■□□□□ 0.25
SYNE4-202ENST00000340477 CLEC12AQ5QGZ9 265 aa16.62■□□□□ 0.25
SYNE4-202ENST00000340477 ZNF770Q6IQ21 691 aaPredicted RBP16.62■□□□□ 0.25
SYNE4-202ENST00000340477 LEG1Q6P5S2 330 aa16.62■□□□□ 0.25
SYNE4-202ENST00000340477 FOXL2NBQ6ZUU3 175 aa16.62■□□□□ 0.25
SYNE4-202ENST00000340477 GLB1L2Q8IW92 636 aa16.62■□□□□ 0.25
SYNE4-202ENST00000340477 WACQ9BTA9 647 aa16.62■□□□□ 0.25
SYNE4-202ENST00000340477 ZNF556Q9HAH1 456 aa16.62■□□□□ 0.25
SYNE4-202ENST00000340477 POLE4Q9NR33 117 aa16.62■□□□□ 0.25
SYNE4-202ENST00000340477 USF3Q68DE3 2245 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 B9A039 149 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 DEAF1O75398 565 aaPredicted RBP16.61■□□□□ 0.25
SYNE4-202ENST00000340477 CD8AP01732 235 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 CD99P14209 185 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 CTLA4P16410 223 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 ZNF32P17041 273 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 NR4A1P22736 598 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 CENPAP49450 140 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 ERFP50548 548 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 RAB35Q15286 201 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 PABPC1L2AQ5JQF8 200 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 C11orf71Q6IPW1 123 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 UNQ6126/PRO20091Q6UXV3 157 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 WFDC11Q8NEX6 87 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 OR4K13Q8NH42 304 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 FGFBP3Q8TAT2 258 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 ZNF75AQ96N20 296 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 SNX18Q96RF0 628 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 EGLN3Q9H6Z9 239 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 DNAJB9Q9UBS3 223 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 BAIAP2Q9UQB8 552 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 POLR1DQ9Y2S0 133 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 CMAHPQ9Y471 501 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 TIMM10BQ9Y5J6 103 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 F8P00451 2351 aa16.61■□□□□ 0.25
SYNE4-202ENST00000340477 EBAG9O00559 213 aa16.6■□□□□ 0.25
SYNE4-202ENST00000340477 MMP7P09237 267 aaPredicted RBP16.6■□□□□ 0.25
SYNE4-202ENST00000340477 ZNF35P13682 527 aa16.6■□□□□ 0.25
SYNE4-202ENST00000340477 THBS4P35443 961 aa16.6■□□□□ 0.25
SYNE4-202ENST00000340477 HGFACQ04756 655 aa16.6■□□□□ 0.25
SYNE4-202ENST00000340477 SCRN3Q0VDG4 424 aa16.6■□□□□ 0.25
SYNE4-202ENST00000340477 COX10Q12887 443 aa16.6■□□□□ 0.25
SYNE4-202ENST00000340477 ADIPOQQ15848 244 aa16.6■□□□□ 0.25
SYNE4-202ENST00000340477 PTCHD4Q6ZW05 846 aa16.6■□□□□ 0.25
SYNE4-202ENST00000340477 SYT9Q86SS6 491 aa16.6■□□□□ 0.25
SYNE4-202ENST00000340477 ZNF584Q8IVC4 421 aa16.6■□□□□ 0.25
SYNE4-202ENST00000340477 TEX47Q8TBZ9 253 aa16.6■□□□□ 0.25
SYNE4-202ENST00000340477 ZNF416Q9BWM5 594 aa16.6■□□□□ 0.25
SYNE4-202ENST00000340477 NUAK2Q9H093 628 aa16.6■□□□□ 0.25
SYNE4-202ENST00000340477 PLK3Q9H4B4 646 aa16.6■□□□□ 0.25
SYNE4-202ENST00000340477 IL20Q9NYY1 176 aa16.6■□□□□ 0.25
SYNE4-202ENST00000340477 PDP1Q9P0J1 537 aaPredicted RBP16.6■□□□□ 0.25
SYNE4-202ENST00000340477 CELSR1Q9NYQ6 3014 aa16.6■□□□□ 0.25
SYNE4-202ENST00000340477 MAP1AP78559 2803 aaPredicted RBP16.6■□□□□ 0.25
SYNE4-202ENST00000340477 H3BN98 237 aa16.59■□□□□ 0.25
SYNE4-202ENST00000340477 H7C417 338 aa16.59■□□□□ 0.25
SYNE4-202ENST00000340477 SNAP29O95721 258 aa16.59■□□□□ 0.25
SYNE4-202ENST00000340477 ERCC1P07992 297 aaPredicted RBP16.59■□□□□ 0.25
SYNE4-202ENST00000340477 HIST1H1CP16403 213 aaKnown RBP16.59■□□□□ 0.25
SYNE4-202ENST00000340477 STOMP27105 288 aa16.59■□□□□ 0.25
SYNE4-202ENST00000340477 CDKN2AP42771 156 aaKnown RBP16.59■□□□□ 0.25
SYNE4-202ENST00000340477 GDI2P50395 445 aaKnown RBP16.59■□□□□ 0.25
SYNE4-202ENST00000340477 NUDT6P53370 316 aa16.59■□□□□ 0.25
SYNE4-202ENST00000340477 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.59■□□□□ 0.25
SYNE4-202ENST00000340477 EFNB3Q15768 340 aa16.59■□□□□ 0.25
SYNE4-202ENST00000340477 PAPD5Q8NDF8 572 aaKnown RBP16.59■□□□□ 0.25
SYNE4-202ENST00000340477 SDR9C7Q8NEX9 313 aa16.59■□□□□ 0.25
SYNE4-202ENST00000340477 OR2T33Q8NG76 320 aa16.59■□□□□ 0.25
SYNE4-202ENST00000340477 OR10H5Q8NGA6 315 aa16.59■□□□□ 0.25
SYNE4-202ENST00000340477 Q96MF0 132 aa16.59■□□□□ 0.25
SYNE4-202ENST00000340477 NMNAT3Q96T66 252 aa16.59■□□□□ 0.25
SYNE4-202ENST00000340477 BDH2Q9BUT1 245 aa16.59■□□□□ 0.25
SYNE4-202ENST00000340477 TSSK6Q9BXA6 273 aa16.59■□□□□ 0.25
SYNE4-202ENST00000340477 OR2H1Q9GZK4 316 aa16.59■□□□□ 0.25
SYNE4-202ENST00000340477 EMC7Q9NPA0 242 aa16.59■□□□□ 0.25
SYNE4-202ENST00000340477 KIF17Q9P2E2 1029 aa16.59■□□□□ 0.25
SYNE4-202ENST00000340477 EIF3KQ9UBQ5 218 aaKnown RBP16.59■□□□□ 0.25
SYNE4-202ENST00000340477 COA3Q9Y2R0 106 aaPredicted RBP16.59■□□□□ 0.25
SYNE4-202ENST00000340477 FKBP7Q9Y680 259 aa16.59■□□□□ 0.25
SYNE4-202ENST00000340477 SOX14O95416 240 aa16.58■□□□□ 0.24
SYNE4-202ENST00000340477 IFNGP01579 166 aa16.58■□□□□ 0.24
SYNE4-202ENST00000340477 CCNOP22674 350 aa16.58■□□□□ 0.24
SYNE4-202ENST00000340477 APEX1P27695 318 aaKnown RBP16.58■□□□□ 0.24
SYNE4-202ENST00000340477 GLRXP35754 106 aa16.58■□□□□ 0.24
SYNE4-202ENST00000340477 SELENOVP59797 346 aa16.58■□□□□ 0.24
SYNE4-202ENST00000340477 LSM6P62312 80 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms