RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 SLC25A25Q6KCM7 469 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 TRILQ7L0X0 811 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 SYT9Q86SS6 491 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 OR9K2Q8NGE7 335 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 OR10D3Q8NH80 312 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 MCHR2Q969V1 340 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 RNF32Q9H0A6 362 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 POLHQ9Y253 713 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 CASKO14936 926 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 KHDRBS3O75525 346 aaKnown RBP16.36■□□□□ 0.21
USP39-201ENST00000323701 GLSO94925 669 aaPredicted RBP16.36■□□□□ 0.21
USP39-201ENST00000323701 KRT8P05787 483 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 HPNP05981 417 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 CD53P19397 219 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 POU3F2P20265 443 aaPredicted RBP16.36■□□□□ 0.21
USP39-201ENST00000323701 EIF1AXP47813 144 aaKnown RBP16.36■□□□□ 0.21
USP39-201ENST00000323701 RRADP55042 308 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 NHLH1Q02575 133 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 EIF2B1Q14232 305 aaKnown RBP16.36■□□□□ 0.21
USP39-201ENST00000323701 RNFT1Q5M7Z0 435 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 LINC00299Q6ZSB3 139 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 PRSS35Q8N3Z0 413 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 C11orf40Q8WZ69 217 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 PPP1R14AQ96A00 147 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 RBP7Q96R05 134 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 OR14A2Q96R54 314 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 ELOVL3Q9HB03 270 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 HMG20AQ9NP66 347 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 ANKRD11Q6UB99 2663 aaPredicted RBP16.36■□□□□ 0.21
USP39-201ENST00000323701 PNPP00491 289 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 GALP22466 123 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 CAPZA2P47755 286 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 EGR3Q06889 387 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 PCK2Q16822 640 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 THEM4Q5T1C6 240 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.36■□□□□ 0.21
USP39-201ENST00000323701 GLB1L2Q8IW92 636 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 OR8B4Q96RC9 309 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 SIAEQ9HAT2 523 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 SMURF1Q9HCE7 757 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 KLK13Q9UKR3 277 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 TMEM14AQ9Y6G1 99 aa16.36■□□□□ 0.21
USP39-201ENST00000323701 GJE1A6NN92 205 aa16.35■□□□□ 0.21
USP39-201ENST00000323701 H3BSH0 61 aa16.35■□□□□ 0.21
USP39-201ENST00000323701 QDPRP09417 244 aa16.35■□□□□ 0.21
USP39-201ENST00000323701 SELENOPP49908 381 aa16.35■□□□□ 0.21
USP39-201ENST00000323701 BLVRAP53004 296 aa16.35■□□□□ 0.21
USP39-201ENST00000323701 ARG2P78540 354 aa16.35■□□□□ 0.21
USP39-201ENST00000323701 ZMAT1Q5H9K5 638 aa16.35■□□□□ 0.21
USP39-201ENST00000323701 SLC18B1Q6NT16 456 aa16.35■□□□□ 0.21
USP39-201ENST00000323701 SLC25A47Q6Q0C1 308 aa16.35■□□□□ 0.21
USP39-201ENST00000323701 ESPNLQ6ZVH7 1005 aa16.35■□□□□ 0.21
USP39-201ENST00000323701 DCXRQ7Z4W1 244 aa16.35■□□□□ 0.21
USP39-201ENST00000323701 KCTD20Q7Z5Y7 419 aa16.35■□□□□ 0.21
USP39-201ENST00000323701 LAX1Q8IWV1 398 aa16.35■□□□□ 0.21
USP39-201ENST00000323701 RDH10Q8IZV5 341 aa16.35■□□□□ 0.21
USP39-201ENST00000323701 OR2V1Q8NHB1 315 aa16.35■□□□□ 0.21
USP39-201ENST00000323701 ST7LQ8TDW4 575 aa16.35■□□□□ 0.21
USP39-201ENST00000323701 HAS2Q92819 552 aa16.35■□□□□ 0.21
USP39-201ENST00000323701 OR2M2Q96R28 347 aa16.35■□□□□ 0.21
USP39-201ENST00000323701 MNTQ99583 582 aa16.35■□□□□ 0.21
USP39-201ENST00000323701 WDR12Q9GZL7 423 aaKnown RBP16.35■□□□□ 0.21
USP39-201ENST00000323701 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.35■□□□□ 0.21
USP39-201ENST00000323701 EMC7Q9NPA0 242 aa16.35■□□□□ 0.21
USP39-201ENST00000323701 APC2O95996 2303 aa16.35■□□□□ 0.21
USP39-201ENST00000323701 A0A075B6Q4 140 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 A0A1W2PPL8 197 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 ZNF726A6NNF4 738 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 LHX2P50458 406 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 OR10A3P58181 314 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 ODF4Q2M2E3 257 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 DEFB109BQ30KR1 87 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 DNM1P34Q6PK57 102 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 FAM220AQ7Z4H9 259 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 TMEM123Q8N131 208 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 MS4A15Q8N5U1 240 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 OR10AC1Q8NH08 325 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 NAA11Q9BSU3 229 aaPredicted RBP16.34■□□□□ 0.21
USP39-201ENST00000323701 FBXL3Q9UKT7 428 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 LIPGQ9Y5X9 500 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 NPIPA2E9PIF3 369 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 NPIPA3F8WFD2 350 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 PIN1P1O15428 100 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 ZNF432O94892 652 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 TACSTD2P09758 323 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 KIR3DL2P43630 455 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 BCAP31P51572 246 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 SRYQ05066 204 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 CDC20Q12834 499 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 ALKBH1Q13686 389 aaKnown RBP16.34■□□□□ 0.21
USP39-201ENST00000323701 POU4F3Q15319 338 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 OR7E24Q6IFN5 339 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 OR2G2Q8NGZ5 317 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 MRPL48Q96GC5 212 aaKnown RBP16.34■□□□□ 0.21
USP39-201ENST00000323701 KCNN2Q9H2S1 579 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 SEC61A2Q9H9S3 476 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 TMEM165Q9HC07 324 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 KLHL9Q9P2J3 617 aa16.34■□□□□ 0.21
USP39-201ENST00000323701 CDV3Q9UKY7 258 aaKnown RBP16.34■□□□□ 0.21
USP39-201ENST00000323701 KLF13Q9Y2Y9 288 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms