RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 FAM131CQ96AQ9 280 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 TMEM169Q96HH4 297 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 MICU1Q9BPX6 476 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 ZNF350Q9GZX5 532 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 LPAR3Q9UBY5 353 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 IL20RAQ9UHF4 553 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 HDGFL3Q9Y3E1 203 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 SLCO1B1Q9Y6L6 691 aa6.05□□□□□ -1.44
ZNF540-201ENST00000316433 OR5H14A6NHG9 310 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 HSPB2A8KAH6 182 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 H3BN98 237 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 GRM6O15303 877 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 PLRG1O43660 514 aaKnown RBP6.04□□□□□ -1.44
ZNF540-201ENST00000316433 GMFGO60234 142 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 PCDH7O60245 1069 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 DFFBO76075 338 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 ZNF432O94892 652 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 VAMP5O95183 116 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 GOSR1O95249 250 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 CNOT4O95628 575 aaKnown RBP6.04□□□□□ -1.44
ZNF540-201ENST00000316433 SOD2P04179 222 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 CD14P08571 375 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 MELTFP08582 738 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 FAM157CP0CG43 387 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 HLA-GP17693 338 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 RPS4Y1P22090 263 aaKnown RBP6.04□□□□□ -1.44
ZNF540-201ENST00000316433 AQP1P29972 269 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 RPL29P47914 159 aaKnown RBP6.04□□□□□ -1.44
ZNF540-201ENST00000316433 SLC11A1P49279 550 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 SGSHP51688 502 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 DVL1P1P54792 670 aaPredicted RBP6.04□□□□□ -1.44
ZNF540-201ENST00000316433 BTG2P78543 158 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 AIMP2Q13155 320 aaKnown RBP6.04□□□□□ -1.44
ZNF540-201ENST00000316433 ZNF234Q14588 700 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 HSPB2Q16082 182 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 DECR1Q16698 335 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 OR2T2Q6IF00 324 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 FAAP20Q6NZ36 180 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 RSPO2Q6UXX9 243 aaPredicted RBP6.04□□□□□ -1.44
ZNF540-201ENST00000316433 DLK2Q6UY11 383 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 IZUMO1Q8IYV9 350 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 MAML2Q8IZL2 1156 aaPredicted RBP6.04□□□□□ -1.44
ZNF540-201ENST00000316433 OR8U1Q8NH10 309 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 SECTM1Q8WVN6 248 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 TMED6Q8WW62 240 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 ZNF689Q96CS4 500 aaPredicted RBP6.04□□□□□ -1.44
ZNF540-201ENST00000316433 ZNF582Q96NG8 517 aaPredicted RBP6.04□□□□□ -1.44
ZNF540-201ENST00000316433 INTS14Q96SY0 518 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 RNF2Q99496 336 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 ELOVL1Q9BW60 279 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 BOCQ9BWV1 1114 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 FOXJ2Q9P0K8 574 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 DKKL1Q9UK85 242 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 DOCK3Q8IZD9 2030 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 A0A0G2JK05 382 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 ANKRD20A5PA0PJZ0 165 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 NPIPB15A6NHN6 443 aaPredicted RBP6.04□□□□□ -1.44
ZNF540-201ENST00000316433 J3KTA2 159 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 GCGP01275 180 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 FGBP02675 491 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 CHRM4P08173 479 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 IGFBP1P08833 259 aaPredicted RBP6.04□□□□□ -1.44
ZNF540-201ENST00000316433 CTXN2P0C2S0 81 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 CD37P11049 281 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 SELPP16109 830 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 APOBEC3AP31941 199 aaPredicted RBP6.04□□□□□ -1.44
ZNF540-201ENST00000316433 GRK4P32298 578 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 OR1E2P47887 323 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 GIPRP48546 466 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 RPS23P62266 143 aaKnown RBP6.04□□□□□ -1.44
ZNF540-201ENST00000316433 PRKCZQ05513 592 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 GGTLC2Q14390 218 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 SLC25A35Q3KQZ1 300 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 KRTCAP3Q53RY4 240 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 ZNF529Q6P280 563 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 AGTRAPQ6RW13 159 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 GALNTL5Q7Z4T8 443 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 OR5D16Q8NGK9 328 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 OR52I2Q8NH67 350 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 ESAMQ96AP7 390 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 SAT2Q96F10 170 aaPredicted RBP6.04□□□□□ -1.44
ZNF540-201ENST00000316433 PIK3IP1Q96FE7 263 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 ZNF607Q96SK3 696 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 SLC35A5Q9BS91 424 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 ALKBH7Q9BT30 221 aaPredicted RBP6.04□□□□□ -1.44
ZNF540-201ENST00000316433 COMMD4Q9H0A8 199 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 ATG5Q9H1Y0 275 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 MRPL17Q9NRX2 175 aaKnown RBP6.04□□□□□ -1.44
ZNF540-201ENST00000316433 SIRT3Q9NTG7 399 aaPredicted RBP6.04□□□□□ -1.44
ZNF540-201ENST00000316433 TVP23BQ9NYZ1 205 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 APOBEC3BQ9UH17 382 aaKnown RBP6.04□□□□□ -1.44
ZNF540-201ENST00000316433 ZNF230Q9UIE0 474 aaPredicted RBP6.04□□□□□ -1.44
ZNF540-201ENST00000316433 ZNF223Q9UK11 482 aaPredicted RBP6.04□□□□□ -1.44
ZNF540-201ENST00000316433 ADAM18Q9Y3Q7 739 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 POMT1Q9Y6A1 747 aa6.04□□□□□ -1.44
ZNF540-201ENST00000316433 F8VVB4 439 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 F8VWA3 439 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 GABARAPH6UMI1 98 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 CCL25O15444 150 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 C1orf105O95561 183 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms