RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 ALDOBP05062 364 aa16.46■□□□□ 0.23
SHKBP1-201ENST00000291842 ANXA7P20073 488 aaKnown RBP16.46■□□□□ 0.23
SHKBP1-201ENST00000291842 C19orf57Q0VDD7 668 aa16.46■□□□□ 0.23
SHKBP1-201ENST00000291842 INPP5JQ15735 1006 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-201ENST00000291842 C2orf76Q3KRA6 126 aa16.46■□□□□ 0.23
SHKBP1-201ENST00000291842 KCTD18Q6PI47 426 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-201ENST00000291842 RABEPKQ7Z6M1 372 aa16.46■□□□□ 0.23
SHKBP1-201ENST00000291842 RANBP3Q9H6Z4 567 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-201ENST00000291842 AKIRIN1Q9H9L7 192 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-201ENST00000291842 NPIPA1Q9UND3 350 aa16.46■□□□□ 0.23
SHKBP1-201ENST00000291842 DHDHQ9UQ10 334 aa16.46■□□□□ 0.23
SHKBP1-201ENST00000291842 GDF9O60383 454 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 CTAG2O75638 210 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 IGHMP01871 453 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 ROM1Q03395 351 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 FDX2Q6P4F2 183 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 LRFN4Q6PJG9 635 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 CREB3L2Q70SY1 520 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 C5orf34Q96MH7 638 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 TMEM185BQ9H7F4 350 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 MYEF2Q9P2K5 600 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 PCDHGA5Q9Y5G8 931 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 MED12Q93074 2177 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 MEIKINA0A087WXM9 373 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 EIF1AYO14602 144 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 XRCC3O43542 346 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 CRABP1P29762 137 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 EMP2P54851 167 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 TLE3Q04726 772 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 PCGF3Q3KNV8 242 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 DCXRQ7Z4W1 244 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 OR8H1Q8NGG4 311 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 OR5M1Q8NGP8 315 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 OR52N5Q8NH56 324 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 ASB5Q8WWX0 329 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 ASB10Q8WXI3 467 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 HGDQ93099 445 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 WDR77Q9BQA1 342 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 CHIAQ9BZP6 476 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 METTL17Q9H7H0 456 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 DLL4Q9NR61 685 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 TAS2R4Q9NYW5 299 aa16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 CDV3Q9UKY7 258 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-201ENST00000291842 IGLV3-12A0A075B6K2 115 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 TRAV18A0A075B6X5 111 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 HSPB2A8KAH6 182 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 SIGLEC6O43699 453 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 TMEM127O75204 238 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 ALX3O95076 343 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 DCDP81605 110 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 FOXK1P85037 733 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 ACY1Q03154 408 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 HSPB2Q16082 182 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 TMEM225Q6GV28 225 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 H1FNTQ75WM6 255 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 FGD2Q7Z6J4 655 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 CATSPERDQ86XM0 798 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 MISPQ8IVT2 679 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 OR4D10Q8NGI6 311 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 FAM3DQ96BQ1 224 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 CGGBP1Q9UFW8 167 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 IGHV5-10-1A0A0J9YXX1 117 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 LOC101059948A0A1B0GTJ6 334 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 NAP1L6A6NFF2 107 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 GGT3PA6NGU5 568 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 EFNA2O43921 213 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 LMX1BO60663 402 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 ZNF823P16415 610 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 SSTR2P30874 369 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 EIF1AXP47813 144 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 BLVRAP53004 296 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 CAMK2DQ13557 499 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 RAB11BQ15907 218 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 EID2Q8N6I1 236 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 SLC26A10Q8NG04 563 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 OR51A2Q8NGJ7 313 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 ST8SIA1Q92185 356 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 CITED4Q96RK1 184 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 CDCP1Q9H5V8 836 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 CENPMQ9NSP4 180 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 RARRES3Q9UL19 164 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 MUC3AQ02505 3323 aa16.44■□□□□ 0.22
SHKBP1-201ENST00000291842 EXPH5Q8NEV8 1989 aa16.43■□□□□ 0.22
SHKBP1-201ENST00000291842 LY6G6EA0A0G2JKS1 128 aa16.43■□□□□ 0.22
SHKBP1-201ENST00000291842 MRPS10P82664 201 aaKnown RBP16.43■□□□□ 0.22
SHKBP1-201ENST00000291842 HSF1Q00613 529 aa16.43■□□□□ 0.22
SHKBP1-201ENST00000291842 ANKRD16Q6P6B7 361 aa16.43■□□□□ 0.22
SHKBP1-201ENST00000291842 OR10G3Q8NGC4 313 aa16.43■□□□□ 0.22
SHKBP1-201ENST00000291842 OR1J4Q8NGS1 313 aa16.43■□□□□ 0.22
SHKBP1-201ENST00000291842 OR2T35Q8NGX2 323 aa16.43■□□□□ 0.22
SHKBP1-201ENST00000291842 CLDN23Q96B33 292 aa16.43■□□□□ 0.22
SHKBP1-201ENST00000291842 ZNF436Q9C0F3 470 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-201ENST00000291842 ZNF69Q9UC07 566 aa16.43■□□□□ 0.22
SHKBP1-201ENST00000291842 U3KQA8 63 aa16.43■□□□□ 0.22
SHKBP1-201ENST00000291842 DCDC2BA2VCK2 349 aa16.43■□□□□ 0.22
SHKBP1-201ENST00000291842 RBBP9O75884 186 aa16.43■□□□□ 0.22
SHKBP1-201ENST00000291842 OR2J2O76002 312 aa16.43■□□□□ 0.22
SHKBP1-201ENST00000291842 DNASE1P24855 282 aa16.43■□□□□ 0.22
SHKBP1-201ENST00000291842 EPHA8P29322 1005 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms