RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 MXD1Q05195 221 aa16.13■□□□□ 0.17
VIM-201ENST00000224237 EIF2B1Q14232 305 aaKnown RBP16.13■□□□□ 0.17
VIM-201ENST00000224237 OTPQ5XKR4 325 aa16.13■□□□□ 0.17
VIM-201ENST00000224237 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.13■□□□□ 0.17
VIM-201ENST00000224237 FAM109AQ8N4B1 249 aa16.13■□□□□ 0.17
VIM-201ENST00000224237 MCHR2Q969V1 340 aa16.13■□□□□ 0.17
VIM-201ENST00000224237 ZNF385AQ96PM9 386 aaKnown RBP16.13■□□□□ 0.17
VIM-201ENST00000224237 MROQ9BYG7 248 aa16.13■□□□□ 0.17
VIM-201ENST00000224237 CASKO14936 926 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 KLK10O43240 276 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 TMCC2O75069 709 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 ROM1Q03395 351 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 ABLIM2Q6H8Q1 611 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 SLC25A47Q6Q0C1 308 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 LRRC69Q6ZNQ3 347 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 ZNF679Q8IYX0 411 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 OR10H5Q8NGA6 315 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 OR52N5Q8NH56 324 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 PNPLA2Q96AD5 504 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 OR2M2Q96R28 347 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 AMELYQ99218 206 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 SLC6A15Q9H2J7 730 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 TPK1Q9H3S4 243 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 ACKR4Q9NPB9 350 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 SLCO1C1Q9NYB5 712 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 KCNMB2Q9Y691 235 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 APC2O95996 2303 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 SPTBN4Q9H254 2564 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 A0A075B6Q4 140 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 A0A1W2PPL8 197 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 RPP14O95059 124 aaKnown RBP16.12■□□□□ 0.17
VIM-201ENST00000224237 QDPRP09417 244 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 SDHBP21912 280 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 S100A5P33763 92 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 CSNK1A1P48729 337 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 PAMR1Q6UXH9 720 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 Q6ZNX1 250 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 RNF166Q96A37 237 aaPredicted RBP16.12■□□□□ 0.17
VIM-201ENST00000224237 ABHD6Q9BV23 337 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 BARHL1Q9BZE3 327 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 AKIP1Q9NQ31 210 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 GLTPQ9NZD2 209 aa16.12■□□□□ 0.17
VIM-201ENST00000224237 CEACAM4O75871 244 aa16.11■□□□□ 0.17
VIM-201ENST00000224237 ZNF708P17019 499 aa16.11■□□□□ 0.17
VIM-201ENST00000224237 CLDN18P56856 261 aa16.11■□□□□ 0.17
VIM-201ENST00000224237 NANOS3P60323 173 aaKnown RBP16.11■□□□□ 0.17
VIM-201ENST00000224237 HNRNPA0Q13151 305 aaKnown RBP16.11■□□□□ 0.17
VIM-201ENST00000224237 ALKBH1Q13686 389 aaKnown RBP16.11■□□□□ 0.17
VIM-201ENST00000224237 SLC10A1Q14973 349 aa16.11■□□□□ 0.17
VIM-201ENST00000224237 ACSM3Q53FZ2 586 aa16.11■□□□□ 0.17
VIM-201ENST00000224237 LRRN1Q6UXK5 716 aa16.11■□□□□ 0.17
VIM-201ENST00000224237 TRILQ7L0X0 811 aa16.11■□□□□ 0.17
VIM-201ENST00000224237 MEIOBQ8N635 442 aa16.11■□□□□ 0.17
VIM-201ENST00000224237 C11orf40Q8WZ69 217 aa16.11■□□□□ 0.17
VIM-201ENST00000224237 PDCD1LG2Q9BQ51 273 aa16.11■□□□□ 0.17
VIM-201ENST00000224237 ELOVL3Q9HB03 270 aa16.11■□□□□ 0.17
VIM-201ENST00000224237 CRNNQ9UBG3 495 aaPredicted RBP16.11■□□□□ 0.17
VIM-201ENST00000224237 PEX16Q9Y5Y5 336 aa16.11■□□□□ 0.17
VIM-201ENST00000224237 IQCMA0A1B0GVH7 501 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 ZNF716A6NP11 495 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 ZNF432O94892 652 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 MTNR1BP49286 362 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 YIF1BQ5BJH7 314 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 CEACAM19Q7Z692 300 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 KRT77Q7Z794 578 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 TMEM123Q8N131 208 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 ZIC4Q8N9L1 334 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 OR6N1Q8NGY5 312 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 HSD17B8Q92506 261 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 TMEM54Q969K7 222 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 INTS12Q96CB8 462 aaKnown RBP16.1■□□□□ 0.17
VIM-201ENST00000224237 PAQR5Q9NXK6 330 aaPredicted RBP16.1■□□□□ 0.17
VIM-201ENST00000224237 WASF3Q9UPY6 502 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 RCE1Q9Y256 329 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 ZNF281Q9Y2X9 895 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 FLVCR1Q9Y5Y0 555 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 J3QRK9 145 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 DVL2O14641 736 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 CYTIPO60759 359 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 GATBO75879 557 aaKnown RBP16.1■□□□□ 0.17
VIM-201ENST00000224237 ZFPL1O95159 310 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 CLEC2LP0C7M8 214 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 ZNF133P52736 654 aaPredicted RBP16.1■□□□□ 0.17
VIM-201ENST00000224237 RIDAP52758 137 aaKnown RBP16.1■□□□□ 0.17
VIM-201ENST00000224237 BCL2A1Q16548 175 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 C10orf128Q5T292 105 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 LRFN4Q6PJG9 635 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 FCRLAQ7L513 359 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 DCXRQ7Z4W1 244 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 TEX19Q8NA77 164 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 ROBO4Q8WZ75 1007 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 AP3S1Q92572 193 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 ABTB1Q969K4 478 aaPredicted RBP16.1■□□□□ 0.17
VIM-201ENST00000224237 ZNF845Q96IR2 970 aaPredicted RBP16.1■□□□□ 0.17
VIM-201ENST00000224237 SEC61A2Q9H9S3 476 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 FRRS1LQ9P0K9 344 aa16.1■□□□□ 0.17
VIM-201ENST00000224237 ACTL6AO96019 429 aa16.09■□□□□ 0.17
VIM-201ENST00000224237 MYL9P24844 172 aa16.09■□□□□ 0.17
VIM-201ENST00000224237 SELENOPP49908 381 aa16.09■□□□□ 0.17
VIM-201ENST00000224237 RPS11P62280 158 aaKnown RBP eCLIP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms