RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Atg5Q99J83 275 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Htra3Q9D236 459 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 SvilQ8K4L3 2170 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm28557A0A087WQQ0 336 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm11127A7VMS2 374 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gstp3F6RWR5 210 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Rdh19G5E8H9 318 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Pip5k1cO70161 661 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Hsd3b1P24815 373 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr1344Q7TQV3 321 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Ptbp3Q8BHD7 523 aaKnown RBP14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr1491Q8VEZ5 319 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 RhcgQ9QXP0 498 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Slc7a11Q9WTR6 502 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 SrsxB2RZI1 361 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm3072F6SKY8 209 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm17654F7AXR3 209 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Zfp708F8VPP0 541 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Dscr3O35075 297 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Chrnb1P09690 501 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr657Q7TRP7 319 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Katnb1Q8BG40 658 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 CdnfQ8CC36 187 aa14.32□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr370E9Q848 314 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Cd8aP01731 247 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Dcaf7P61963 342 aaKnown RBP14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Trav8d-2Q5R1B6 112 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gprin3Q8BWS5 763 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr1504Q8VFQ4 315 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr444Q8VFS6 310 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 1700069L16RikQ9D9H5 109 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr655E9Q252 308 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Mfsd2bQ3T9M1 494 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Tbccd1Q640P7 552 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 IppkQ6P1C1 489 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 PcnpQ6P8I4 178 aaKnown RBP14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 H2-M2Q6W9L1 343 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Scml4Q80VG1 408 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Vmn1r231Q8R2A3 311 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr133Q8VG94 312 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Pkmyt1Q9ESG9 490 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Kcnmb4Q9JIN6 210 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Hacd4A2AKM2 232 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 SparcP07214 302 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Fam109bQ14B98 259 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Mfsd12Q3U481 476 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Dctn4Q8CBY8 467 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr820Q8VFU5 312 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Mrgpra8Q91ZC4 305 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Siglec5Q920G3 569 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Asf1bQ9DAP7 202 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Phf1Q9Z1B8 559 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr1076A2AK60 313 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Prr36E9PV26 1098 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm20390E9PZF0 267 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Mmp12P34960 473 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Kcnab1P63143 401 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Tie1Q06806 1134 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 SypQ62277 314 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Slc6a5Q761V0 799 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr787Q7TRI1 312 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Slc25a44Q8BGF9 314 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 GldnQ8BMF8 549 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Rdh10Q8VCH7 341 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr1020Q8VFK7 317 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr229Q8VFN5 307 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 ChrdQ9Z0E2 948 aa14.31□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm21854A0A087WNM4 232 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm15821A6X8J8 139 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm8882E9Q7E4 283 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Esp36G3UZD8 160 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm21812J3QN84 227 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Ccl4P14097 92 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Rfx3P48381 749 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Pgap1Q3UUQ7 922 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Irgm1Q60766 409 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Prss34Q80UR4 318 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Comtd1Q8BIG7 262 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 ZxdcQ8C8V1 858 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Osbpl11Q8CI95 751 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Plet1Q8VEN2 237 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr1309Q8VF83 320 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 9230112D13RikQ9D260 137 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr71Q9QZ18 312 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Jmjd7P0C872 316 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 RflnbQ5SVD0 216 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Ptpn18Q61152 453 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Prg2Q61878 223 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 BC061237Q6P8I2 184 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 LcorQ6ZPI3 433 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Tbl1xr1Q8BHJ5 514 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 QdprQ8BVI4 241 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 PigtQ8BXQ2 582 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Elac1Q8VEB6 362 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr401Q8VFX6 315 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Raet1eQ9CZQ6 251 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Adad2Q9D5P4 478 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Bbs10Q9DBI2 713 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Oasl2Q9Z2F2 508 aa14.3□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 PikfyveQ9Z1T6 2097 aa14.3□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 130.5 ms