RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 METTL22Q9BUU2 404 aaPredicted RBP21.54■■□□□ 1.04
PHGDH-213ENST00000641272 MAP3K2Q9Y2U5 619 aa21.54■■□□□ 1.04
PHGDH-213ENST00000641272 PSME4Q14997 1843 aa21.53■■□□□ 1.04
PHGDH-213ENST00000641272 H7C1D1 291 aa21.53■■□□□ 1.04
PHGDH-213ENST00000641272 DDX58O95786 925 aaKnown RBP21.53■■□□□ 1.04
PHGDH-213ENST00000641272 EGFRP00533 1210 aa21.53■■□□□ 1.04
PHGDH-213ENST00000641272 SAMD7Q7Z3H4 446 aa21.53■■□□□ 1.04
PHGDH-213ENST00000641272 CCDC191Q8NCU4 936 aa21.53■■□□□ 1.04
PHGDH-213ENST00000641272 PRDM10Q9NQV6 1147 aa21.53■■□□□ 1.04
PHGDH-213ENST00000641272 AOC2O75106 756 aa21.52■■□□□ 1.04
PHGDH-213ENST00000641272 CCDC152Q4G0S7 254 aa21.52■■□□□ 1.04
PHGDH-213ENST00000641272 ANKIB1Q9P2G1 1089 aa21.52■■□□□ 1.04
PHGDH-213ENST00000641272 PDE8AO60658 829 aa21.51■■□□□ 1.03
PHGDH-213ENST00000641272 ECE1P42892 770 aa21.51■■□□□ 1.03
PHGDH-213ENST00000641272 MAP2K1Q02750 393 aaPredicted RBP21.51■■□□□ 1.03
PHGDH-213ENST00000641272 RBM26Q5T8P6 1007 aaKnown RBP21.51■■□□□ 1.03
PHGDH-213ENST00000641272 PI4KAP2A4QPH2 592 aa21.5■■□□□ 1.03
PHGDH-213ENST00000641272 USP48Q86UV5 1035 aa21.5■■□□□ 1.03
PHGDH-213ENST00000641272 PI4KAP1Q8N8J0 262 aa21.5■■□□□ 1.03
PHGDH-213ENST00000641272 TSKSQ9UJT2 592 aa21.5■■□□□ 1.03
PHGDH-213ENST00000641272 GGA1Q9UJY5 639 aa21.5■■□□□ 1.03
PHGDH-213ENST00000641272 POLR2AP24928 1970 aaKnown RBP21.5■■□□□ 1.03
PHGDH-213ENST00000641272 IGKV5-2P06315 115 aa21.49■■□□□ 1.03
PHGDH-213ENST00000641272 CWF19L2Q2TBE0 894 aaKnown RBP21.49■■□□□ 1.03
PHGDH-213ENST00000641272 G2E3Q7L622 706 aa21.49■■□□□ 1.03
PHGDH-213ENST00000641272 SAPCD2Q86UD0 394 aa21.49■■□□□ 1.03
PHGDH-213ENST00000641272 STK31Q9BXU1 1019 aa21.49■■□□□ 1.03
PHGDH-213ENST00000641272 PGAP2Q9UHJ9 254 aa21.49■■□□□ 1.03
PHGDH-213ENST00000641272 ADM5C9JUS6 153 aa21.48■■□□□ 1.03
PHGDH-213ENST00000641272 G3V3G9 751 aa21.48■■□□□ 1.03
PHGDH-213ENST00000641272 HSP90B1P14625 803 aaKnown RBP21.48■■□□□ 1.03
PHGDH-213ENST00000641272 CTSWP56202 376 aa21.48■■□□□ 1.03
PHGDH-213ENST00000641272 TWISTNBQ3B726 338 aaPredicted RBP21.48■■□□□ 1.03
PHGDH-213ENST00000641272 DCAF8Q5TAQ9 597 aa21.48■■□□□ 1.03
PHGDH-213ENST00000641272 KSR2Q6VAB6 950 aa21.48■■□□□ 1.03
PHGDH-213ENST00000641272 CDC37L1Q7L3B6 337 aa21.48■■□□□ 1.03
PHGDH-213ENST00000641272 ANKRD18AQ8IVF6 992 aa21.48■■□□□ 1.03
PHGDH-213ENST00000641272 WWC1Q8IX03 1113 aa21.48■■□□□ 1.03
PHGDH-213ENST00000641272 ZC3H15Q8WU90 426 aaKnown RBP21.48■■□□□ 1.03
PHGDH-213ENST00000641272 ZC3H12CQ9C0D7 883 aaKnown RBP21.48■■□□□ 1.03
PHGDH-213ENST00000641272 PODXL2Q9NZ53 605 aa21.48■■□□□ 1.03
PHGDH-213ENST00000641272 KIF4BQ2VIQ3 1234 aa21.47■■□□□ 1.03
PHGDH-213ENST00000641272 DPF2Q92785 391 aa21.47■■□□□ 1.03
PHGDH-213ENST00000641272 SALL2Q9Y467 1007 aaPredicted RBP21.47■■□□□ 1.03
PHGDH-213ENST00000641272 ZNF646O15015 1829 aaPredicted RBP21.46■■□□□ 1.03
PHGDH-213ENST00000641272 RPS12P25398 132 aaKnown RBP21.46■■□□□ 1.03
PHGDH-213ENST00000641272 BEGAINQ9BUH8 593 aa21.46■■□□□ 1.03
PHGDH-213ENST00000641272 MRS2Q9HD23 443 aa21.46■■□□□ 1.03
PHGDH-213ENST00000641272 ASTN2O75129 1339 aaPredicted RBP21.46■■□□□ 1.03
PHGDH-213ENST00000641272 XDHP47989 1333 aa21.46■■□□□ 1.03
PHGDH-213ENST00000641272 NEXNQ0ZGT2 675 aa21.45■■□□□ 1.02
PHGDH-213ENST00000641272 KRT26Q7Z3Y9 468 aa21.45■■□□□ 1.02
PHGDH-213ENST00000641272 GREM2Q9H772 168 aa21.45■■□□□ 1.02
PHGDH-213ENST00000641272 GGA3Q9NZ52 723 aa21.45■■□□□ 1.02
PHGDH-213ENST00000641272 FANCIQ9NVI1 1328 aa21.45■■□□□ 1.02
PHGDH-213ENST00000641272 WTIPA6NIX2 430 aaPredicted RBP21.44■■□□□ 1.02
PHGDH-213ENST00000641272 CCDC27Q2M243 656 aa21.44■■□□□ 1.02
PHGDH-213ENST00000641272 UBE3BQ7Z3V4 1068 aa21.44■■□□□ 1.02
PHGDH-213ENST00000641272 NEURL1BA8MQ27 555 aa21.43■■□□□ 1.02
PHGDH-213ENST00000641272 HUNKP57058 714 aa21.43■■□□□ 1.02
PHGDH-213ENST00000641272 CDC5LQ99459 802 aaKnown RBP21.43■■□□□ 1.02
PHGDH-213ENST00000641272 CHMP4AQ9BY43 222 aa21.43■■□□□ 1.02
PHGDH-213ENST00000641272 SLC4A2P04920 1241 aa21.42■■□□□ 1.02
PHGDH-213ENST00000641272 VIL1P09327 827 aaKnown RBP21.42■■□□□ 1.02
PHGDH-213ENST00000641272 TTLL11Q8NHH1 800 aa21.42■■□□□ 1.02
PHGDH-213ENST00000641272 DCPSQ96C86 337 aaKnown RBP21.42■■□□□ 1.02
PHGDH-213ENST00000641272 A0A1B0GUL6 1792 aa21.41■■□□□ 1.02
PHGDH-213ENST00000641272 FLIIQ13045 1269 aa21.41■■□□□ 1.02
PHGDH-213ENST00000641272 ZNF609O15014 1411 aa21.4■■□□□ 1.02
PHGDH-213ENST00000641272 IL16Q14005 1332 aa21.4■■□□□ 1.02
PHGDH-213ENST00000641272 ATP2B4P23634 1241 aa21.4■■□□□ 1.02
PHGDH-213ENST00000641272 FKBP5Q13451 457 aaPredicted RBP21.4■■□□□ 1.02
PHGDH-213ENST00000641272 RSBN1LQ6PCB5 846 aaPredicted RBP21.4■■□□□ 1.02
PHGDH-213ENST00000641272 FBXW7Q969H0 707 aa21.4■■□□□ 1.02
PHGDH-213ENST00000641272 ZIC5Q96T25 663 aa21.4■■□□□ 1.02
PHGDH-213ENST00000641272 MED23Q9ULK4 1368 aa21.39■■□□□ 1.02
PHGDH-213ENST00000641272 MAP2K2P36507 400 aa21.39■■□□□ 1.01
PHGDH-213ENST00000641272 FAM161AQ3B820 660 aa21.39■■□□□ 1.01
PHGDH-213ENST00000641272 HHIPL1Q96JK4 782 aa21.39■■□□□ 1.01
PHGDH-213ENST00000641272 GBA2Q9HCG7 927 aaPredicted RBP21.39■■□□□ 1.01
PHGDH-213ENST00000641272 CACNA1FO60840 1977 aa21.39■■□□□ 1.01
PHGDH-213ENST00000641272 ANGEL2Q5VTE6 544 aaKnown RBP21.38■■□□□ 1.01
PHGDH-213ENST00000641272 ABHD8Q96I13 439 aa21.38■■□□□ 1.01
PHGDH-213ENST00000641272 MXD3Q9BW11 206 aa21.38■■□□□ 1.01
PHGDH-213ENST00000641272 MINPP1Q9UNW1 487 aa21.38■■□□□ 1.01
PHGDH-213ENST00000641272 SCAF8Q9UPN6 1271 aaKnown RBP21.38■■□□□ 1.01
PHGDH-213ENST00000641272 CASP8AP2Q9UKL3 1982 aa21.37■■□□□ 1.01
PHGDH-213ENST00000641272 ANP32CO43423 234 aa21.37■■□□□ 1.01
PHGDH-213ENST00000641272 SULF1Q8IWU6 871 aa21.37■■□□□ 1.01
PHGDH-213ENST00000641272 CDCA5Q96FF9 252 aa21.37■■□□□ 1.01
PHGDH-213ENST00000641272 H7C1W4 665 aa21.36■■□□□ 1.01
PHGDH-213ENST00000641272 KLRK1P26718 216 aa21.36■■□□□ 1.01
PHGDH-213ENST00000641272 CCT4P50991 539 aaKnown RBP21.36■■□□□ 1.01
PHGDH-213ENST00000641272 BRPF1P55201 1214 aaPredicted RBP21.36■■□□□ 1.01
PHGDH-213ENST00000641272 GCKRQ14397 625 aa21.36■■□□□ 1.01
PHGDH-213ENST00000641272 AGBL3Q8NEM8 1001 aa21.36■■□□□ 1.01
PHGDH-213ENST00000641272 DNAAF4Q8WXU2 420 aa21.36■■□□□ 1.01
PHGDH-213ENST00000641272 BSDC1Q9NW68 430 aaPredicted RBP21.36■■□□□ 1.01
PHGDH-213ENST00000641272 USP17L3A6NCW0 530 aa21.35■■□□□ 1.01
PHGDH-213ENST00000641272 USP17L4A6NCW7 530 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms