RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 NIP7Q9Y221 180 aaKnown RBP eCLIP16.65■□□□□ 0.26
SCARB2-216ENST00000639300 TMEM2Q9UHN6 1383 aa16.65■□□□□ 0.26
SCARB2-216ENST00000639300 A0A1B0GUL7 405 aa16.65■□□□□ 0.26
SCARB2-216ENST00000639300 CAVIN2O95810 425 aa16.65■□□□□ 0.26
SCARB2-216ENST00000639300 ATP6V1AP38606 617 aa16.65■□□□□ 0.26
SCARB2-216ENST00000639300 ZNF287Q9HBT7 754 aa16.65■□□□□ 0.26
SCARB2-216ENST00000639300 IRS4O14654 1257 aaPredicted RBP16.65■□□□□ 0.26
SCARB2-216ENST00000639300 ZSCAN12O43309 604 aa16.65■□□□□ 0.26
SCARB2-216ENST00000639300 KIF4BQ2VIQ3 1234 aa16.65■□□□□ 0.26
SCARB2-216ENST00000639300 CCDC152Q4G0S7 254 aa16.65■□□□□ 0.26
SCARB2-216ENST00000639300 CCDC181Q5TID7 509 aa16.65■□□□□ 0.26
SCARB2-216ENST00000639300 SLC27A2O14975 620 aa16.65■□□□□ 0.26
SCARB2-216ENST00000639300 LMOD1P29536 600 aaPredicted RBP16.65■□□□□ 0.26
SCARB2-216ENST00000639300 TNNI3KQ59H18 835 aa16.65■□□□□ 0.26
SCARB2-216ENST00000639300 LUZP1Q86V48 1076 aa16.65■□□□□ 0.26
SCARB2-216ENST00000639300 AOPEPQ8N6M6 819 aa16.65■□□□□ 0.26
SCARB2-216ENST00000639300 MIGA1Q8NAN2 632 aa16.65■□□□□ 0.26
SCARB2-216ENST00000639300 FPGT-TNNI3KV9GXZ4 949 aa16.65■□□□□ 0.26
SCARB2-216ENST00000639300 RAD50Q92878 1312 aa16.65■□□□□ 0.26
SCARB2-216ENST00000639300 PATL2C9JE40 543 aaKnown RBP16.64■□□□□ 0.25
SCARB2-216ENST00000639300 DZIP3Q86Y13 1208 aaKnown RBP16.64■□□□□ 0.25
SCARB2-216ENST00000639300 KCNG4Q8TDN1 519 aa16.64■□□□□ 0.25
SCARB2-216ENST00000639300 KIAA0232Q92628 1395 aa16.64■□□□□ 0.25
SCARB2-216ENST00000639300 NCOA5Q9HCD5 579 aaKnown RBP16.64■□□□□ 0.25
SCARB2-216ENST00000639300 SKILP12757 684 aa16.64■□□□□ 0.25
SCARB2-216ENST00000639300 SPTLC2O15270 562 aa16.63■□□□□ 0.25
SCARB2-216ENST00000639300 GADD45BO75293 160 aaPredicted RBP16.63■□□□□ 0.25
SCARB2-216ENST00000639300 GSDMDP57764 484 aa16.63■□□□□ 0.25
SCARB2-216ENST00000639300 ZNF76P36508 570 aa16.63■□□□□ 0.25
SCARB2-216ENST00000639300 AFMP43652 599 aa16.63■□□□□ 0.25
SCARB2-216ENST00000639300 GCKRQ14397 625 aa16.63■□□□□ 0.25
SCARB2-216ENST00000639300 ODF2Q5BJF6 829 aa16.63■□□□□ 0.25
SCARB2-216ENST00000639300 LMBRD1Q9NUN5 540 aa16.63■□□□□ 0.25
SCARB2-216ENST00000639300 EYA2O00167 538 aa16.63■□□□□ 0.25
SCARB2-216ENST00000639300 NEMFO60524 1076 aa16.63■□□□□ 0.25
SCARB2-216ENST00000639300 UBA7P41226 1012 aa16.63■□□□□ 0.25
SCARB2-216ENST00000639300 RTN1Q16799 776 aa16.63■□□□□ 0.25
SCARB2-216ENST00000639300 CRACR2BQ8N4Y2 399 aaPredicted RBP16.63■□□□□ 0.25
SCARB2-216ENST00000639300 ZNF219Q9P2Y4 722 aaPredicted RBP16.63■□□□□ 0.25
SCARB2-216ENST00000639300 ENOX2Q16206 610 aaKnown RBP16.63■□□□□ 0.25
SCARB2-216ENST00000639300 SSH3Q8TE77 659 aa16.63■□□□□ 0.25
SCARB2-216ENST00000639300 IDEP14735 1019 aa16.62■□□□□ 0.25
SCARB2-216ENST00000639300 NBPF5PQ86XG9 351 aaPredicted RBP16.62■□□□□ 0.25
SCARB2-216ENST00000639300 KDM5AP29375 1690 aaKnown RBP16.62■□□□□ 0.25
SCARB2-216ENST00000639300 TMCO3Q6UWJ1 677 aa16.62■□□□□ 0.25
SCARB2-216ENST00000639300 ANKRD18AQ8IVF6 992 aa16.62■□□□□ 0.25
SCARB2-216ENST00000639300 ERLIN1O75477 346 aa16.62■□□□□ 0.25
SCARB2-216ENST00000639300 CD2BP2O95400 341 aaKnown RBP16.62■□□□□ 0.25
SCARB2-216ENST00000639300 LUC7LQ9NQ29 371 aaKnown RBP16.62■□□□□ 0.25
SCARB2-216ENST00000639300 TTC37Q6PGP7 1564 aa16.62■□□□□ 0.25
SCARB2-216ENST00000639300 GIGYF1O75420 1035 aaPredicted RBP16.62■□□□□ 0.25
SCARB2-216ENST00000639300 RPS6KB1P23443 525 aa16.62■□□□□ 0.25
SCARB2-216ENST00000639300 HSPA4P34932 840 aa16.62■□□□□ 0.25
SCARB2-216ENST00000639300 UBASH3AP57075 661 aa16.62■□□□□ 0.25
SCARB2-216ENST00000639300 FAM193AP78312 1265 aa16.62■□□□□ 0.25
SCARB2-216ENST00000639300 CCDC96Q2M329 555 aa16.62■□□□□ 0.25
SCARB2-216ENST00000639300 PLBD2Q8NHP8 589 aa16.62■□□□□ 0.25
SCARB2-216ENST00000639300 RPGRQ92834 1020 aaKnown RBP16.62■□□□□ 0.25
SCARB2-216ENST00000639300 ESR2Q92731 530 aa16.61■□□□□ 0.25
SCARB2-216ENST00000639300 PDCL3Q9H2J4 239 aa16.61■□□□□ 0.25
SCARB2-216ENST00000639300 PDE4BQ07343 736 aa16.61■□□□□ 0.25
SCARB2-216ENST00000639300 OTUD7BQ6GQQ9 843 aa16.61■□□□□ 0.25
SCARB2-216ENST00000639300 NUP88Q99567 741 aaPredicted RBP16.61■□□□□ 0.25
SCARB2-216ENST00000639300 ZSWIM4Q9H7M6 989 aa16.61■□□□□ 0.25
SCARB2-216ENST00000639300 SLC52A2Q9HAB3 445 aa16.61■□□□□ 0.25
SCARB2-216ENST00000639300 PTGS1P23219 599 aa16.61■□□□□ 0.25
SCARB2-216ENST00000639300 SNW1Q13573 536 aaKnown RBP16.61■□□□□ 0.25
SCARB2-216ENST00000639300 SIRT2Q8IXJ6 389 aa16.61■□□□□ 0.25
SCARB2-216ENST00000639300 EAF2Q96CJ1 260 aaPredicted RBP16.61■□□□□ 0.25
SCARB2-216ENST00000639300 TMEM63CQ9P1W3 806 aa16.61■□□□□ 0.25
SCARB2-216ENST00000639300 KRT23Q9C075 422 aa16.6■□□□□ 0.25
SCARB2-216ENST00000639300 KAT14Q9H8E8 782 aa16.6■□□□□ 0.25
SCARB2-216ENST00000639300 A0A1B0GVL5 298 aa16.6■□□□□ 0.25
SCARB2-216ENST00000639300 ERICH4A6NGS2 130 aa16.6■□□□□ 0.25
SCARB2-216ENST00000639300 KIF5CO60282 957 aa16.6■□□□□ 0.25
SCARB2-216ENST00000639300 DDB1Q16531 1140 aa16.6■□□□□ 0.25
SCARB2-216ENST00000639300 MAGEB6Q8N7X4 407 aa16.6■□□□□ 0.25
SCARB2-216ENST00000639300 CCDC66A2RUB6 948 aa16.6■□□□□ 0.25
SCARB2-216ENST00000639300 SPDYE4A6NLX3 237 aa16.6■□□□□ 0.25
SCARB2-216ENST00000639300 ZKSCAN3Q9BRR0 538 aa16.6■□□□□ 0.25
SCARB2-216ENST00000639300 SYCP1Q15431 976 aa16.6■□□□□ 0.25
SCARB2-216ENST00000639300 NAA16Q6N069 864 aaPredicted RBP16.6■□□□□ 0.25
SCARB2-216ENST00000639300 CCDC102AQ96A19 550 aa16.6■□□□□ 0.25
SCARB2-216ENST00000639300 KIF5BP33176 963 aa16.59■□□□□ 0.25
SCARB2-216ENST00000639300 UNC5CLQ8IV45 518 aa16.59■□□□□ 0.25
SCARB2-216ENST00000639300 JAG2Q9Y219 1238 aa16.59■□□□□ 0.25
SCARB2-216ENST00000639300 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.59■□□□□ 0.25
SCARB2-216ENST00000639300 MYO5CQ9NQX4 1742 aa16.59■□□□□ 0.25
SCARB2-216ENST00000639300 DNA2P51530 1060 aa16.59■□□□□ 0.25
SCARB2-216ENST00000639300 IFIT1BQ5T764 474 aaKnown RBP16.59■□□□□ 0.25
SCARB2-216ENST00000639300 CEP135Q66GS9 1140 aa16.59■□□□□ 0.25
SCARB2-216ENST00000639300 AEBP2Q6ZN18 517 aaPredicted RBP16.59■□□□□ 0.25
SCARB2-216ENST00000639300 SEPT11Q9NVA2 429 aaKnown RBP16.59■□□□□ 0.25
SCARB2-216ENST00000639300 PRKCSHP14314 528 aaPredicted RBP16.58■□□□□ 0.25
SCARB2-216ENST00000639300 CDR1P51861 262 aa16.58■□□□□ 0.25
SCARB2-216ENST00000639300 GNG11P61952 73 aa16.58■□□□□ 0.25
SCARB2-216ENST00000639300 JAK2O60674 1132 aa16.58■□□□□ 0.25
SCARB2-216ENST00000639300 SETQ01105 290 aaPredicted RBP16.58■□□□□ 0.25
SCARB2-216ENST00000639300 PTH1RQ03431 593 aa16.58■□□□□ 0.25
SCARB2-216ENST00000639300 NLRP3Q96P20 1036 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms