RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	CHRNA2	Q15822	529 aa		18.61	■□□□□ 0.57
CACNA1A-238	ENST00000637276	C20orf194	Q5TEA3	1177 aa		18.61	■□□□□ 0.57
CACNA1A-238	ENST00000637276	BACH1	O14867	736 aa		18.61	■□□□□ 0.57
CACNA1A-238	ENST00000637276	ZEB2	O60315	1214 aa		18.61	■□□□□ 0.57
CACNA1A-238	ENST00000637276	VIM	P08670	466 aa	Known RBP	18.61	■□□□□ 0.57
CACNA1A-238	ENST00000637276		E7EVH7	732 aa		18.61	■□□□□ 0.57
CACNA1A-238	ENST00000637276	GMNN	O75496	209 aa		18.61	■□□□□ 0.57
CACNA1A-238	ENST00000637276	ANXA1	P04083	346 aa		18.61	■□□□□ 0.57
CACNA1A-238	ENST00000637276	MX1	P20591	662 aa		18.61	■□□□□ 0.57
CACNA1A-238	ENST00000637276	RXRA	P19793	462 aa		18.6	■□□□□ 0.57
CACNA1A-238	ENST00000637276	KRT32	Q14532	448 aa		18.6	■□□□□ 0.57
CACNA1A-238	ENST00000637276	MAN1A1	P33908	653 aa		18.6	■□□□□ 0.57
CACNA1A-238	ENST00000637276	RFC1	P35251	1148 aa	Predicted RBP	18.6	■□□□□ 0.57
CACNA1A-238	ENST00000637276	STAT6	P42226	847 aa		18.6	■□□□□ 0.57
CACNA1A-238	ENST00000637276	SARNP	P82979	210 aa	Known RBP	18.6	■□□□□ 0.57
CACNA1A-238	ENST00000637276	MCM6	Q14566	821 aa		18.6	■□□□□ 0.57
CACNA1A-238	ENST00000637276	RAB3GAP1	Q15042	981 aa		18.6	■□□□□ 0.57
CACNA1A-238	ENST00000637276	RRBP1	Q9P2E9	1410 aa	Known RBP	18.6	■□□□□ 0.57
CACNA1A-238	ENST00000637276	RAB11FIP3	O75154	756 aa		18.6	■□□□□ 0.57
CACNA1A-238	ENST00000637276	MARCKS	P29966	332 aa	Predicted RBP	18.6	■□□□□ 0.57
CACNA1A-238	ENST00000637276	KIF5A	Q12840	1032 aa		18.6	■□□□□ 0.57
CACNA1A-238	ENST00000637276	IL1RL1	Q01638	556 aa		18.59	■□□□□ 0.57
CACNA1A-238	ENST00000637276	TAF7	Q15545	349 aa	Predicted RBP	18.59	■□□□□ 0.57
CACNA1A-238	ENST00000637276	BSPRY	Q5W0U4	402 aa		18.59	■□□□□ 0.57
CACNA1A-238	ENST00000637276	GOLGA6C	A6NDK9	693 aa		18.59	■□□□□ 0.57
CACNA1A-238	ENST00000637276	GOLGA6B	A6NDN3	693 aa		18.59	■□□□□ 0.57
CACNA1A-238	ENST00000637276	ADCY5	O95622	1261 aa		18.59	■□□□□ 0.57
CACNA1A-238	ENST00000637276	GOLGA6D	P0CG33	693 aa		18.59	■□□□□ 0.57
CACNA1A-238	ENST00000637276	SMARCC2	Q8TAQ2	1214 aa		18.59	■□□□□ 0.57
CACNA1A-238	ENST00000637276	GOLGA6A	Q9NYA3	693 aa		18.59	■□□□□ 0.57
CACNA1A-238	ENST00000637276	FAM200A	Q8TCP9	573 aa		18.59	■□□□□ 0.57
CACNA1A-238	ENST00000637276	RTEL1-TNFRSF6B	F6WH68	1400 aa		18.59	■□□□□ 0.57
CACNA1A-238	ENST00000637276	RAPGEF1	Q13905	1077 aa		18.59	■□□□□ 0.57
CACNA1A-238	ENST00000637276	CEP120	Q8N960	986 aa		18.59	■□□□□ 0.57
CACNA1A-238	ENST00000637276	MAGED2	Q9UNF1	606 aa	Predicted RBP	18.59	■□□□□ 0.57
CACNA1A-238	ENST00000637276	AKAP2	Q9Y2D5	859 aa		18.59	■□□□□ 0.57
CACNA1A-238	ENST00000637276	TCEANC2	Q96MN5	208 aa		18.59	■□□□□ 0.57
CACNA1A-238	ENST00000637276	SMC6	Q96SB8	1091 aa		18.59	■□□□□ 0.57
CACNA1A-238	ENST00000637276	BEGAIN	Q9BUH8	593 aa		18.58	■□□□□ 0.57
CACNA1A-238	ENST00000637276	UBA7	P41226	1012 aa		18.58	■□□□□ 0.57
CACNA1A-238	ENST00000637276	PPP1R7	Q15435	360 aa		18.58	■□□□□ 0.57
CACNA1A-238	ENST00000637276	NBPF6	Q5VWK0	638 aa		18.58	■□□□□ 0.57
CACNA1A-238	ENST00000637276	NBPF5P	Q86XG9	351 aa	Predicted RBP	18.58	■□□□□ 0.57
CACNA1A-238	ENST00000637276	NBPF4	Q96M43	638 aa		18.58	■□□□□ 0.57
CACNA1A-238	ENST00000637276	FCHSD2	O94868	740 aa		18.58	■□□□□ 0.56
CACNA1A-238	ENST00000637276	PDE3A	Q14432	1141 aa		18.58	■□□□□ 0.56
CACNA1A-238	ENST00000637276	PNISR	Q8TF01	805 aa	Known RBP	18.58	■□□□□ 0.56
CACNA1A-238	ENST00000637276	FNDC3A	Q9Y2H6	1198 aa	Known RBP	18.58	■□□□□ 0.56
CACNA1A-238	ENST00000637276	USP16	Q9Y5T5	823 aa		18.58	■□□□□ 0.56
CACNA1A-238	ENST00000637276	NECAB1	Q8N987	351 aa		18.58	■□□□□ 0.56
CACNA1A-238	ENST00000637276	DYNC1I1	O14576	645 aa		18.57	■□□□□ 0.56
CACNA1A-238	ENST00000637276	NAA15	Q9BXJ9	866 aa	Known RBP	18.57	■□□□□ 0.56
CACNA1A-238	ENST00000637276	KARS	Q15046	597 aa	Known RBP	18.57	■□□□□ 0.56
CACNA1A-238	ENST00000637276	SKA2	Q8WVK7	121 aa	Predicted RBP	18.57	■□□□□ 0.56
CACNA1A-238	ENST00000637276	IGSF3	O75054	1194 aa		18.57	■□□□□ 0.56
CACNA1A-238	ENST00000637276	TACC3	Q9Y6A5	838 aa		18.57	■□□□□ 0.56
CACNA1A-238	ENST00000637276	MCM7	P33993	719 aa		18.57	■□□□□ 0.56
CACNA1A-238	ENST00000637276	UBLCP1	Q8WVY7	318 aa	Predicted RBP	18.57	■□□□□ 0.56
CACNA1A-238	ENST00000637276	XRCC6	P12956	609 aa	Known RBP eCLIP	18.56	■□□□□ 0.56
CACNA1A-238	ENST00000637276	CNGA1	P29973	690 aa		18.56	■□□□□ 0.56
CACNA1A-238	ENST00000637276	STX17	P56962	302 aa		18.56	■□□□□ 0.56
CACNA1A-238	ENST00000637276	RNF217	Q8TC41	542 aa		18.56	■□□□□ 0.56
CACNA1A-238	ENST00000637276	GBP3	Q9H0R5	595 aa		18.56	■□□□□ 0.56
CACNA1A-238	ENST00000637276	GIMAP6	Q6P9H5	292 aa		18.56	■□□□□ 0.56
CACNA1A-238	ENST00000637276	METAP2	P50579	478 aa	Known RBP eCLIP	18.56	■□□□□ 0.56
CACNA1A-238	ENST00000637276	RMDN2	Q96LZ7	410 aa		18.56	■□□□□ 0.56
CACNA1A-238	ENST00000637276	IFIT1B	Q5T764	474 aa	Known RBP	18.56	■□□□□ 0.56
CACNA1A-238	ENST00000637276	MFSD6	Q6ZSS7	791 aa		18.56	■□□□□ 0.56
CACNA1A-238	ENST00000637276	CCDC24	Q8N4L8	307 aa		18.56	■□□□□ 0.56
CACNA1A-238	ENST00000637276	ZKSCAN3	Q9BRR0	538 aa		18.56	■□□□□ 0.56
CACNA1A-238	ENST00000637276	TMTC4	Q5T4D3	741 aa		18.56	■□□□□ 0.56
CACNA1A-238	ENST00000637276	BAG1	Q99933	345 aa	Predicted RBP	18.56	■□□□□ 0.56
CACNA1A-238	ENST00000637276	UST	Q9Y2C2	406 aa		18.56	■□□□□ 0.56
CACNA1A-238	ENST00000637276	GNG11	P61952	73 aa		18.56	■□□□□ 0.56
CACNA1A-238	ENST00000637276	MKRN1	Q9UHC7	482 aa	Known RBP	18.56	■□□□□ 0.56
CACNA1A-238	ENST00000637276	MAP3K2	Q9Y2U5	619 aa		18.56	■□□□□ 0.56
CACNA1A-238	ENST00000637276	TTC21A	Q8NDW8	1320 aa		18.55	■□□□□ 0.56
CACNA1A-238	ENST00000637276	MICALL1	Q8N3F8	863 aa		18.55	■□□□□ 0.56
CACNA1A-238	ENST00000637276	KIF1BP	Q96EK5	621 aa		18.55	■□□□□ 0.56
CACNA1A-238	ENST00000637276	CKAP4	Q07065	602 aa	Known RBP	18.55	■□□□□ 0.56
CACNA1A-238	ENST00000637276	SNW1	Q13573	536 aa	Known RBP	18.55	■□□□□ 0.56
CACNA1A-238	ENST00000637276	VPS52	Q8N1B4	723 aa		18.55	■□□□□ 0.56
CACNA1A-238	ENST00000637276	GBP7	Q8N8V2	638 aa	Predicted RBP	18.55	■□□□□ 0.56
CACNA1A-238	ENST00000637276	MIGA1	Q8NAN2	632 aa		18.55	■□□□□ 0.56
CACNA1A-238	ENST00000637276	SWAP70	Q9UH65	585 aa		18.55	■□□□□ 0.56
CACNA1A-238	ENST00000637276	SLC4A1	P02730	911 aa		18.55	■□□□□ 0.56
CACNA1A-238	ENST00000637276	AAMP	Q13685	434 aa		18.55	■□□□□ 0.56
CACNA1A-238	ENST00000637276	SLC9A5	Q14940	896 aa		18.55	■□□□□ 0.56
CACNA1A-238	ENST00000637276	TAB3	Q8N5C8	712 aa	Predicted RBP	18.55	■□□□□ 0.56
CACNA1A-238	ENST00000637276	GAS8	O95995	478 aa		18.55	■□□□□ 0.56
CACNA1A-238	ENST00000637276	JAKMIP2	Q96AA8	810 aa		18.55	■□□□□ 0.56
CACNA1A-238	ENST00000637276	IMPG2	Q9BZV3	1241 aa		18.55	■□□□□ 0.56
CACNA1A-238	ENST00000637276	TXNDC9	O14530	226 aa		18.54	■□□□□ 0.56
CACNA1A-238	ENST00000637276	SPAG5	Q96R06	1193 aa		18.54	■□□□□ 0.56
CACNA1A-238	ENST00000637276	TRIM7	Q9C029	511 aa		18.54	■□□□□ 0.56
CACNA1A-238	ENST00000637276	N4BP3	O15049	544 aa		18.54	■□□□□ 0.56
CACNA1A-238	ENST00000637276	CEP85L	Q5SZL2	805 aa		18.54	■□□□□ 0.56
CACNA1A-238	ENST00000637276	CASC4	Q6P4E1	433 aa		18.54	■□□□□ 0.56
CACNA1A-238	ENST00000637276	ZSCAN30	Q86W11	494 aa		18.54	■□□□□ 0.56
CACNA1A-238	ENST00000637276	MAFG	O15525	162 aa		18.54	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms