RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 USP42Q9H9J4 1324 aaKnown RBP12.67□□□□□ -0.38
ATRX-216ENST00000624403 GTPBP6O43824 516 aaPredicted RBP12.67□□□□□ -0.38
ATRX-216ENST00000624403 RBM6P78332 1123 aaKnown RBP12.67□□□□□ -0.38
ATRX-216ENST00000624403 GPR153Q6NV75 609 aa12.67□□□□□ -0.38
ATRX-216ENST00000624403 FAM196AQ6ZSG2 479 aa12.67□□□□□ -0.38
ATRX-216ENST00000624403 SYNE4Q8N205 404 aa12.67□□□□□ -0.38
ATRX-216ENST00000624403 TRMT112Q9UI30 125 aaKnown RBP12.67□□□□□ -0.38
ATRX-216ENST00000624403 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.67□□□□□ -0.38
ATRX-216ENST00000624403 RPS6KA4O75676 772 aa12.66□□□□□ -0.38
ATRX-216ENST00000624403 SUSD4Q5VX71 490 aa12.66□□□□□ -0.38
ATRX-216ENST00000624403 AACSQ86V21 672 aa12.66□□□□□ -0.38
ATRX-216ENST00000624403 PI4K2BQ8TCG2 481 aa12.66□□□□□ -0.38
ATRX-216ENST00000624403 TBC1D32Q96NH3 1257 aa12.66□□□□□ -0.38
ATRX-216ENST00000624403 IPO9Q96P70 1041 aaKnown RBP12.66□□□□□ -0.38
ATRX-216ENST00000624403 ZSWIM6Q9HCJ5 1215 aa12.66□□□□□ -0.38
ATRX-216ENST00000624403 RYDENQ9NUL5 291 aaKnown RBP12.66□□□□□ -0.38
ATRX-216ENST00000624403 NUP98P52948 1817 aa12.66□□□□□ -0.38
ATRX-216ENST00000624403 BRWD3Q6RI45 1802 aa12.65□□□□□ -0.38
ATRX-216ENST00000624403 IRS4O14654 1257 aaPredicted RBP12.65□□□□□ -0.38
ATRX-216ENST00000624403 CSF1RP07333 972 aa12.65□□□□□ -0.38
ATRX-216ENST00000624403 IFIT2P09913 472 aaKnown RBP12.65□□□□□ -0.38
ATRX-216ENST00000624403 TFCP2Q12800 502 aa12.65□□□□□ -0.38
ATRX-216ENST00000624403 ARSIQ5FYB1 569 aa12.65□□□□□ -0.38
ATRX-216ENST00000624403 SMIM5Q71RC9 77 aa12.65□□□□□ -0.38
ATRX-216ENST00000624403 EAF2Q96CJ1 260 aaPredicted RBP12.65□□□□□ -0.38
ATRX-216ENST00000624403 LY75O60449 1722 aa12.65□□□□□ -0.38
ATRX-216ENST00000624403 TTC41PQ6P2S7 1318 aa12.64□□□□□ -0.39
ATRX-216ENST00000624403 GNPATO15228 680 aa12.64□□□□□ -0.39
ATRX-216ENST00000624403 CTSWP56202 376 aa12.64□□□□□ -0.39
ATRX-216ENST00000624403 PARP10Q53GL7 1025 aa12.64□□□□□ -0.39
ATRX-216ENST00000624403 ATG9AQ7Z3C6 839 aa12.64□□□□□ -0.39
ATRX-216ENST00000624403 KHSRPQ92945 711 aaKnown RBP eCLIP12.64□□□□□ -0.39
ATRX-216ENST00000624403 ZNF594Q96JF6 807 aaPredicted RBP12.64□□□□□ -0.39
ATRX-216ENST00000624403 UTP14AQ9BVJ6 771 aaKnown RBP12.64□□□□□ -0.39
ATRX-216ENST00000624403 ECHDC1Q9NTX5 307 aa12.64□□□□□ -0.39
ATRX-216ENST00000624403 ZNF652Q9Y2D9 606 aa12.64□□□□□ -0.39
ATRX-216ENST00000624403 BCORQ6W2J9 1755 aa12.64□□□□□ -0.39
ATRX-216ENST00000624403 TRIM6-TRIM34B2RNG4 842 aa12.63□□□□□ -0.39
ATRX-216ENST00000624403 EYA2O00167 538 aa12.63□□□□□ -0.39
ATRX-216ENST00000624403 PDE8AO60658 829 aa12.63□□□□□ -0.39
ATRX-216ENST00000624403 CIAO1O76071 339 aa12.63□□□□□ -0.39
ATRX-216ENST00000624403 TRIM37O94972 964 aa12.63□□□□□ -0.39
ATRX-216ENST00000624403 CCDC57Q2TAC2 916 aa12.63□□□□□ -0.39
ATRX-216ENST00000624403 CLEC4GQ6UXB4 293 aa12.63□□□□□ -0.39
ATRX-216ENST00000624403 TTLL11Q8NHH1 800 aa12.63□□□□□ -0.39
ATRX-216ENST00000624403 DDRGK1Q96HY6 314 aa12.63□□□□□ -0.39
ATRX-216ENST00000624403 GPATCH3Q96I76 525 aa12.63□□□□□ -0.39
ATRX-216ENST00000624403 CCDC85AQ96PX6 553 aaPredicted RBP12.63□□□□□ -0.39
ATRX-216ENST00000624403 C22orf23Q9BZE7 217 aa12.63□□□□□ -0.39
ATRX-216ENST00000624403 CCDC8Q9H0W5 538 aaPredicted RBP12.63□□□□□ -0.39
ATRX-216ENST00000624403 TLR7Q9NYK1 1049 aaKnown RBP12.63□□□□□ -0.39
ATRX-216ENST00000624403 NIP7Q9Y221 180 aaKnown RBP eCLIP12.63□□□□□ -0.39
ATRX-216ENST00000624403 SH3TC1Q8TE82 1336 aa12.62□□□□□ -0.39
ATRX-216ENST00000624403 TUBGCP6Q96RT7 1819 aa12.62□□□□□ -0.39
ATRX-216ENST00000624403 FAM177BA6PVY3 158 aa12.62□□□□□ -0.39
ATRX-216ENST00000624403 ERC2O15083 957 aa12.62□□□□□ -0.39
ATRX-216ENST00000624403 GLRX3O76003 335 aaKnown RBP12.62□□□□□ -0.39
ATRX-216ENST00000624403 NTSR2O95665 410 aa12.62□□□□□ -0.39
ATRX-216ENST00000624403 IL15P40933 162 aaPredicted RBP12.62□□□□□ -0.39
ATRX-216ENST00000624403 IFIT5Q13325 482 aaKnown RBP12.62□□□□□ -0.39
ATRX-216ENST00000624403 LRRC24Q50LG9 513 aa12.62□□□□□ -0.39
ATRX-216ENST00000624403 TNNI3KQ59H18 835 aa12.62□□□□□ -0.39
ATRX-216ENST00000624403 CASC1Q6TDU7 716 aa12.62□□□□□ -0.39
ATRX-216ENST00000624403 AMIGO3Q86WK7 504 aa12.62□□□□□ -0.39
ATRX-216ENST00000624403 RILPL2Q969X0 211 aa12.62□□□□□ -0.39
ATRX-216ENST00000624403 PUS3Q9BZE2 481 aaKnown RBP12.62□□□□□ -0.39
ATRX-216ENST00000624403 BCL2L12Q9HB09 334 aa12.62□□□□□ -0.39
ATRX-216ENST00000624403 LRRC4BQ9NT99 713 aa12.62□□□□□ -0.39
ATRX-216ENST00000624403 NARFQ9UHQ1 456 aa12.62□□□□□ -0.39
ATRX-216ENST00000624403 RTCBQ9Y3I0 505 aaKnown RBP12.62□□□□□ -0.39
ATRX-216ENST00000624403 FPGT-TNNI3KV9GXZ4 949 aa12.62□□□□□ -0.39
ATRX-216ENST00000624403 EIF5BO60841 1220 aaKnown RBP12.61□□□□□ -0.39
ATRX-216ENST00000624403 MAP4K4O95819 1239 aaPredicted RBP12.61□□□□□ -0.39
ATRX-216ENST00000624403 RXRBP28702 533 aa12.61□□□□□ -0.39
ATRX-216ENST00000624403 USPL1Q5W0Q7 1092 aa12.61□□□□□ -0.39
ATRX-216ENST00000624403 AK7Q96M32 723 aa12.61□□□□□ -0.39
ATRX-216ENST00000624403 GREM2Q9H772 168 aa12.61□□□□□ -0.39
ATRX-216ENST00000624403 GPHNQ9NQX3 736 aaPredicted RBP12.61□□□□□ -0.39
ATRX-216ENST00000624403 SRP68Q9UHB9 627 aaKnown RBP12.61□□□□□ -0.39
ATRX-216ENST00000624403 C4BP0C0L5 1744 aa12.61□□□□□ -0.39
ATRX-216ENST00000624403 SCN7AQ01118 1682 aa12.61□□□□□ -0.39
ATRX-216ENST00000624403 ANKRD18BA2A2Z9 1011 aa12.6□□□□□ -0.39
ATRX-216ENST00000624403 HCLS1P14317 486 aaPredicted RBP12.6□□□□□ -0.39
ATRX-216ENST00000624403 ITGA6P23229 1130 aa12.6□□□□□ -0.39
ATRX-216ENST00000624403 CHMLP26374 656 aa12.6□□□□□ -0.39
ATRX-216ENST00000624403 TAF7LQ5H9L4 462 aa12.6□□□□□ -0.39
ATRX-216ENST00000624403 SLC27A3Q5K4L6 730 aa12.6□□□□□ -0.39
ATRX-216ENST00000624403 ARHGEF1Q92888 912 aaKnown RBP12.6□□□□□ -0.39
ATRX-216ENST00000624403 GPR108Q9NPR9 543 aa12.6□□□□□ -0.39
ATRX-216ENST00000624403 DBNLQ9UJU6 430 aaKnown RBP12.6□□□□□ -0.39
ATRX-216ENST00000624403 TAF1LQ8IZX4 1826 aa12.6□□□□□ -0.39
ATRX-216ENST00000624403 ZPR1O75312 459 aa12.59□□□□□ -0.39
ATRX-216ENST00000624403 RBM25P49756 843 aaKnown RBP12.59□□□□□ -0.39
ATRX-216ENST00000624403 TBC1D9BQ66K14 1250 aa12.59□□□□□ -0.39
ATRX-216ENST00000624403 CNTROBQ8N137 903 aa12.59□□□□□ -0.39
ATRX-216ENST00000624403 FBXO41Q8TF61 875 aa12.59□□□□□ -0.39
ATRX-216ENST00000624403 RGS17Q9UGC6 210 aaPredicted RBP12.59□□□□□ -0.39
ATRX-216ENST00000624403 PHF14O94880 888 aa12.58□□□□□ -0.4
ATRX-216ENST00000624403 VARS2Q5ST30 1063 aaKnown RBP12.58□□□□□ -0.4
ATRX-216ENST00000624403 TRAPPC3LQ5T215 181 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms