RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 LMOD1P29536 600 aaPredicted RBP15.75■□□□□ 0.11
LINC00963-217ENST00000624009 EPHX2P34913 555 aa15.75■□□□□ 0.11
LINC00963-217ENST00000624009 IGHMBP2P38935 993 aaKnown RBP15.75■□□□□ 0.11
LINC00963-217ENST00000624009 CXCL9Q07325 125 aa15.75■□□□□ 0.11
LINC00963-217ENST00000624009 CIAPIN1Q6FI81 312 aa15.75■□□□□ 0.11
LINC00963-217ENST00000624009 C9orf78Q9NZ63 289 aaPredicted RBP15.75■□□□□ 0.11
LINC00963-217ENST00000624009 ZNF609O15014 1411 aa15.75■□□□□ 0.11
LINC00963-217ENST00000624009 C6orf229H3BNL8 230 aa15.74■□□□□ 0.11
LINC00963-217ENST00000624009 ITGA6P23229 1130 aa15.74■□□□□ 0.11
LINC00963-217ENST00000624009 SCNN1DP51172 638 aa15.74■□□□□ 0.11
LINC00963-217ENST00000624009 ZC3H12CQ9C0D7 883 aaKnown RBP15.74■□□□□ 0.11
LINC00963-217ENST00000624009 MINPP1Q9UNW1 487 aa15.74■□□□□ 0.11
LINC00963-217ENST00000624009 A0A1B0GUL6 1792 aa15.73■□□□□ 0.11
LINC00963-217ENST00000624009 UFL1O94874 794 aa15.73■□□□□ 0.11
LINC00963-217ENST00000624009 FOXO4P98177 505 aa15.73■□□□□ 0.11
LINC00963-217ENST00000624009 USP50Q70EL3 339 aaPredicted RBP15.73■□□□□ 0.11
LINC00963-217ENST00000624009 DPF2Q92785 391 aa15.73■□□□□ 0.11
LINC00963-217ENST00000624009 CCDC85AQ96PX6 553 aaPredicted RBP15.73■□□□□ 0.11
LINC00963-217ENST00000624009 ANKRD2Q9GZV1 360 aa15.73■□□□□ 0.11
LINC00963-217ENST00000624009 GPRC5DQ9NZD1 345 aa15.73■□□□□ 0.11
LINC00963-217ENST00000624009 GJA3Q9Y6H8 435 aa15.73■□□□□ 0.11
LINC00963-217ENST00000624009 MED23Q9ULK4 1368 aa15.73■□□□□ 0.11
LINC00963-217ENST00000624009 ANKRD18BA2A2Z9 1011 aa15.72■□□□□ 0.11
LINC00963-217ENST00000624009 RPS12P25398 132 aaKnown RBP15.72■□□□□ 0.11
LINC00963-217ENST00000624009 IFIT5Q13325 482 aaKnown RBP15.72■□□□□ 0.11
LINC00963-217ENST00000624009 FAM161AQ3B820 660 aa15.72■□□□□ 0.11
LINC00963-217ENST00000624009 SLC4A10Q6U841 1118 aa15.72■□□□□ 0.11
LINC00963-217ENST00000624009 ARHGAP45Q92619 1136 aa15.72■□□□□ 0.11
LINC00963-217ENST00000624009 MPHOSPH8Q99549 860 aa15.72■□□□□ 0.11
LINC00963-217ENST00000624009 SMC4Q9NTJ3 1288 aa15.72■□□□□ 0.11
LINC00963-217ENST00000624009 LEMD3Q9Y2U8 911 aa15.72■□□□□ 0.11
LINC00963-217ENST00000624009 TRPM7Q96QT4 1865 aa15.71■□□□□ 0.11
LINC00963-217ENST00000624009 YDJCA8MPS7 323 aa15.71■□□□□ 0.11
LINC00963-217ENST00000624009 ADARB2Q9NS39 739 aaKnown RBP15.71■□□□□ 0.11
LINC00963-217ENST00000624009 KIF16BQ96L93 1317 aa15.7■□□□□ 0.1
LINC00963-217ENST00000624009 PASKQ96RG2 1323 aa15.7■□□□□ 0.1
LINC00963-217ENST00000624009 POLR2AP24928 1970 aaKnown RBP15.7■□□□□ 0.1
LINC00963-217ENST00000624009 ECE2O60344 883 aa15.7■□□□□ 0.1
LINC00963-217ENST00000624009 CCT4P50991 539 aaKnown RBP15.7■□□□□ 0.1
LINC00963-217ENST00000624009 RARSP54136 660 aaKnown RBP15.7■□□□□ 0.1
LINC00963-217ENST00000624009 PODNQ7Z5L7 613 aa15.7■□□□□ 0.1
LINC00963-217ENST00000624009 API5Q9BZZ5 524 aaKnown RBP15.7■□□□□ 0.1
LINC00963-217ENST00000624009 RAD17O75943 681 aa15.69■□□□□ 0.1
LINC00963-217ENST00000624009 POTEIP0CG38 1075 aa15.69■□□□□ 0.1
LINC00963-217ENST00000624009 POTEJP0CG39 1038 aa15.69■□□□□ 0.1
LINC00963-217ENST00000624009 EPS15P42566 896 aa15.69■□□□□ 0.1
LINC00963-217ENST00000624009 GMPSP49915 693 aaPredicted RBP15.69■□□□□ 0.1
LINC00963-217ENST00000624009 CCDC57Q2TAC2 916 aa15.69■□□□□ 0.1
LINC00963-217ENST00000624009 RABL6Q3YEC7 729 aaPredicted RBP15.69■□□□□ 0.1
LINC00963-217ENST00000624009 LMBR1LQ6UX01 489 aa15.69■□□□□ 0.1
LINC00963-217ENST00000624009 DNAJC5GQ8N7S2 189 aa15.69■□□□□ 0.1
LINC00963-217ENST00000624009 ZC3H15Q8WU90 426 aaKnown RBP15.69■□□□□ 0.1
LINC00963-217ENST00000624009 DBNDD1Q9H9R9 158 aa15.69■□□□□ 0.1
LINC00963-217ENST00000624009 ITGBL1O95965 494 aaPredicted RBP15.68■□□□□ 0.1
LINC00963-217ENST00000624009 VIL1P09327 827 aaKnown RBP15.68■□□□□ 0.1
LINC00963-217ENST00000624009 NBPF7P0C2Y1 421 aaPredicted RBP15.68■□□□□ 0.1
LINC00963-217ENST00000624009 MMP14P50281 582 aa15.68■□□□□ 0.1
LINC00963-217ENST00000624009 EAPPQ56P03 285 aaPredicted RBP15.68■□□□□ 0.1
LINC00963-217ENST00000624009 C15orf52Q6ZUT6 534 aaKnown RBP15.68■□□□□ 0.1
LINC00963-217ENST00000624009 BCL2L13Q9BXK5 485 aa15.68■□□□□ 0.1
LINC00963-217ENST00000624009 PGAP2Q9UHJ9 254 aa15.68■□□□□ 0.1
LINC00963-217ENST00000624009 HDAC5Q9UQL6 1122 aa15.68■□□□□ 0.1
LINC00963-217ENST00000624009 ZBED9Q6R2W3 1325 aa15.68■□□□□ 0.1
LINC00963-217ENST00000624009 ZNF646O15015 1829 aaPredicted RBP15.67■□□□□ 0.1
LINC00963-217ENST00000624009 PSMD14O00487 310 aa15.67■□□□□ 0.1
LINC00963-217ENST00000624009 RIMBP2O15034 1052 aa15.67■□□□□ 0.1
LINC00963-217ENST00000624009 HNRNPUQ00839 825 aaKnown RBP eCLIP15.67■□□□□ 0.12e-9■■■□□ 15
LINC00963-217ENST00000624009 EPHA10Q5JZY3 1008 aa15.67■□□□□ 0.1
LINC00963-217ENST00000624009 AGBL3Q8NEM8 1001 aa15.67■□□□□ 0.1
LINC00963-217ENST00000624009 KAZALD1Q96I82 304 aa15.67■□□□□ 0.1
LINC00963-217ENST00000624009 COA1Q9GZY4 146 aa15.67■□□□□ 0.1
LINC00963-217ENST00000624009 USP44Q9H0E7 712 aa15.67■□□□□ 0.1
LINC00963-217ENST00000624009 CREBZFQ9NS37 354 aa15.67■□□□□ 0.1
LINC00963-217ENST00000624009 ZNF804BA4D1E1 1349 aa15.67■□□□□ 0.1
LINC00963-217ENST00000624009 G3V3G9 751 aa15.66■□□□□ 0.1
LINC00963-217ENST00000624009 H7C1D1 291 aa15.66■□□□□ 0.1
LINC00963-217ENST00000624009 CHRNDQ07001 517 aa15.66■□□□□ 0.1
LINC00963-217ENST00000624009 DCAF8Q5TAQ9 597 aa15.66■□□□□ 0.1
LINC00963-217ENST00000624009 CNTROBQ8N137 903 aa15.66■□□□□ 0.1
LINC00963-217ENST00000624009 SUCLG2Q96I99 432 aa15.66■□□□□ 0.1
LINC00963-217ENST00000624009 CNOT7Q9UIV1 285 aaKnown RBP15.66■□□□□ 0.1
LINC00963-217ENST00000624009 IPO8O15397 1037 aaKnown RBP15.65■□□□□ 0.1
LINC00963-217ENST00000624009 DOK7Q18PE1 504 aa15.65■□□□□ 0.1
LINC00963-217ENST00000624009 KLRG1Q96E93 195 aa15.65■□□□□ 0.1
LINC00963-217ENST00000624009 NOB1Q9ULX3 412 aaKnown RBP15.65■□□□□ 0.1
LINC00963-217ENST00000624009 CLEC11AQ9Y240 323 aa15.65■□□□□ 0.1
LINC00963-217ENST00000624009 CHMP3Q9Y3E7 222 aa15.65■□□□□ 0.1
LINC00963-217ENST00000624009 USP17L3A6NCW0 530 aa15.64■□□□□ 0.09
LINC00963-217ENST00000624009 USP17L4A6NCW7 530 aa15.64■□□□□ 0.09
LINC00963-217ENST00000624009 TAF7LQ5H9L4 462 aa15.64■□□□□ 0.09
LINC00963-217ENST00000624009 LDHAL6AQ6ZMR3 332 aa15.64■□□□□ 0.09
LINC00963-217ENST00000624009 USP17L1Q7RTZ2 530 aa15.64■□□□□ 0.09
LINC00963-217ENST00000624009 BICC1Q9H694 974 aaKnown RBP15.64■□□□□ 0.09
LINC00963-217ENST00000624009 MYO3BQ8WXR4 1341 aa15.64■□□□□ 0.09
LINC00963-217ENST00000624009 KCNJ4P48050 445 aa15.63■□□□□ 0.09
LINC00963-217ENST00000624009 STRIP1Q5VSL9 837 aa15.63■□□□□ 0.09
LINC00963-217ENST00000624009 INTS3Q68E01 1043 aaKnown RBP15.63■□□□□ 0.09
LINC00963-217ENST00000624009 RSBN1LQ6PCB5 846 aaPredicted RBP15.63■□□□□ 0.09
LINC00963-217ENST00000624009 MICALL2Q8IY33 904 aa15.63■□□□□ 0.09
LINC00963-217ENST00000624009 ANKRD44Q8N8A2 993 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms