RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 TRPM4Q8TD43 1214 aa26.89■■□□□ 1.9
PMPCA-212ENST00000622209 TAF1P21675 1872 aa26.89■■□□□ 1.89
PMPCA-212ENST00000622209 GRM1Q13255 1194 aa26.88■■□□□ 1.89
PMPCA-212ENST00000622209 KSR2Q6VAB6 950 aa26.88■■□□□ 1.89
PMPCA-212ENST00000622209 G2E3Q7L622 706 aa26.88■■□□□ 1.89
PMPCA-212ENST00000622209 TBC1D16Q8TBP0 767 aa26.88■■□□□ 1.89
PMPCA-212ENST00000622209 GLIS2Q9BZE0 524 aaPredicted RBP26.88■■□□□ 1.89
PMPCA-212ENST00000622209 WBP1LQ9NX94 342 aa26.88■■□□□ 1.89
PMPCA-212ENST00000622209 MAP3K2Q9Y2U5 619 aa26.88■■□□□ 1.89
PMPCA-212ENST00000622209 DUOX1Q9NRD9 1551 aa26.88■■□□□ 1.89
PMPCA-212ENST00000622209 DDX60Q8IY21 1712 aaKnown RBP26.87■■□□□ 1.89
PMPCA-212ENST00000622209 H7C1D1 291 aa26.87■■□□□ 1.89
PMPCA-212ENST00000622209 PSMD14O00487 310 aa26.87■■□□□ 1.89
PMPCA-212ENST00000622209 FLIIQ13045 1269 aa26.87■■□□□ 1.89
PMPCA-212ENST00000622209 MICALL2Q8IY33 904 aa26.87■■□□□ 1.89
PMPCA-212ENST00000622209 EYA3Q99504 573 aa26.87■■□□□ 1.89
PMPCA-212ENST00000622209 KCNQ5Q9NR82 932 aa26.87■■□□□ 1.89
PMPCA-212ENST00000622209 CACNA1FO60840 1977 aa26.87■■□□□ 1.89
PMPCA-212ENST00000622209 CDHR2Q9BYE9 1310 aa26.87■■□□□ 1.89
PMPCA-212ENST00000622209 COL4A1P02462 1669 aa26.86■■□□□ 1.89
PMPCA-212ENST00000622209 PDE8AO60658 829 aa26.86■■□□□ 1.89
PMPCA-212ENST00000622209 CT47B1P0C2W7 299 aaPredicted RBP26.86■■□□□ 1.89
PMPCA-212ENST00000622209 CTCFP49711 727 aaPredicted RBP26.86■■□□□ 1.89
PMPCA-212ENST00000622209 CCDC152Q4G0S7 254 aa26.86■■□□□ 1.89
PMPCA-212ENST00000622209 PGAP2Q9UHJ9 254 aa26.86■■□□□ 1.89
PMPCA-212ENST00000622209 PI4KAP2A4QPH2 592 aa26.85■■□□□ 1.89
PMPCA-212ENST00000622209 ECE2O60344 883 aa26.85■■□□□ 1.89
PMPCA-212ENST00000622209 PI4KAP1Q8N8J0 262 aa26.85■■□□□ 1.89
PMPCA-212ENST00000622209 CAPNS2Q96L46 248 aa26.85■■□□□ 1.89
PMPCA-212ENST00000622209 ANKIB1Q9P2G1 1089 aa26.85■■□□□ 1.89
PMPCA-212ENST00000622209 CELF2O95319 508 aaKnown RBP26.84■■□□□ 1.89
PMPCA-212ENST00000622209 CYP4F22Q6NT55 531 aa26.84■■□□□ 1.89
PMPCA-212ENST00000622209 ZC3H15Q8WU90 426 aaKnown RBP26.84■■□□□ 1.89
PMPCA-212ENST00000622209 ZC3H12CQ9C0D7 883 aaKnown RBP26.84■■□□□ 1.89
PMPCA-212ENST00000622209 ZBED9Q6R2W3 1325 aa26.84■■□□□ 1.89
PMPCA-212ENST00000622209 UFL1O94874 794 aa26.83■■□□□ 1.89
PMPCA-212ENST00000622209 FKBP5Q13451 457 aaPredicted RBP26.83■■□□□ 1.89
PMPCA-212ENST00000622209 SAMD7Q7Z3H4 446 aa26.83■■□□□ 1.89
PMPCA-212ENST00000622209 ZNF408Q9H9D4 720 aa26.83■■□□□ 1.89
PMPCA-212ENST00000622209 TLL2Q9Y6L7 1015 aa26.83■■□□□ 1.89
PMPCA-212ENST00000622209 IGKV5-2P06315 115 aa26.82■■□□□ 1.88
PMPCA-212ENST00000622209 LBX1P52954 281 aa26.82■■□□□ 1.88
PMPCA-212ENST00000622209 MAP2K1Q02750 393 aaPredicted RBP26.82■■□□□ 1.88
PMPCA-212ENST00000622209 DPF2Q92785 391 aa26.82■■□□□ 1.88
PMPCA-212ENST00000622209 PRDM10Q9NQV6 1147 aa26.82■■□□□ 1.88
PMPCA-212ENST00000622209 PODXL2Q9NZ53 605 aa26.82■■□□□ 1.88
PMPCA-212ENST00000622209 G3V3G9 751 aa26.81■■□□□ 1.88
PMPCA-212ENST00000622209 ECE1P42892 770 aa26.81■■□□□ 1.88
PMPCA-212ENST00000622209 TBC1D10BQ4KMP7 808 aaPredicted RBP26.81■■□□□ 1.88
PMPCA-212ENST00000622209 RBM26Q5T8P6 1007 aaKnown RBP26.81■■□□□ 1.88
PMPCA-212ENST00000622209 DCAF8Q5TAQ9 597 aa26.81■■□□□ 1.88
PMPCA-212ENST00000622209 CDC37L1Q7L3B6 337 aa26.81■■□□□ 1.88
PMPCA-212ENST00000622209 USP48Q86UV5 1035 aa26.81■■□□□ 1.88
PMPCA-212ENST00000622209 GGA1Q9UJY5 639 aa26.81■■□□□ 1.88
PMPCA-212ENST00000622209 LRRC37AA6NMS7 1700 aa26.8■■□□□ 1.88
PMPCA-212ENST00000622209 NEXNQ0ZGT2 675 aa26.8■■□□□ 1.88
PMPCA-212ENST00000622209 ALDH1L2Q3SY69 923 aa26.8■■□□□ 1.88
PMPCA-212ENST00000622209 RTL9Q8NET4 1388 aa26.8■■□□□ 1.88
PMPCA-212ENST00000622209 DLK2Q6UY11 383 aa26.79■■□□□ 1.88
PMPCA-212ENST00000622209 ANKRD18AQ8IVF6 992 aa26.79■■□□□ 1.88
PMPCA-212ENST00000622209 EGFRP00533 1210 aa26.78■■□□□ 1.88
PMPCA-212ENST00000622209 CWF19L2Q2TBE0 894 aaKnown RBP26.78■■□□□ 1.88
PMPCA-212ENST00000622209 SAPCD2Q86UD0 394 aa26.78■■□□□ 1.88
PMPCA-212ENST00000622209 MRPL50Q8N5N7 158 aaKnown RBP26.78■■□□□ 1.88
PMPCA-212ENST00000622209 DNAAF4Q8WXU2 420 aa26.78■■□□□ 1.88
PMPCA-212ENST00000622209 RPS12P25398 132 aaKnown RBP26.77■■□□□ 1.88
PMPCA-212ENST00000622209 CTSWP56202 376 aa26.77■■□□□ 1.88
PMPCA-212ENST00000622209 SSH1Q8WYL5 1049 aa26.77■■□□□ 1.88
PMPCA-212ENST00000622209 AOC2O75106 756 aa26.76■■□□□ 1.87
PMPCA-212ENST00000622209 HSPA8P11142 646 aaKnown RBP26.76■■□□□ 1.87
PMPCA-212ENST00000622209 NEURL1BA8MQ27 555 aa26.75■■□□□ 1.87
PMPCA-212ENST00000622209 VIL1P09327 827 aaKnown RBP26.75■■□□□ 1.87
PMPCA-212ENST00000622209 TTLL11Q8NHH1 800 aa26.75■■□□□ 1.87
PMPCA-212ENST00000622209 XDHP47989 1333 aa26.74■■□□□ 1.87
PMPCA-212ENST00000622209 CDC5LQ99459 802 aaKnown RBP26.74■■□□□ 1.87
PMPCA-212ENST00000622209 GREM2Q9H772 168 aa26.74■■□□□ 1.87
PMPCA-212ENST00000622209 WTIPA6NIX2 430 aaPredicted RBP26.73■■□□□ 1.87
PMPCA-212ENST00000622209 KRT26Q7Z3Y9 468 aa26.73■■□□□ 1.87
PMPCA-212ENST00000622209 BEGAINQ9BUH8 593 aa26.73■■□□□ 1.87
PMPCA-212ENST00000622209 PTPRCP08575 1304 aa26.72■■□□□ 1.87
PMPCA-212ENST00000622209 ATP2B4P23634 1241 aa26.72■■□□□ 1.87
PMPCA-212ENST00000622209 UBE3BQ7Z3V4 1068 aa26.72■■□□□ 1.87
PMPCA-212ENST00000622209 LINS1Q8NG48 757 aa26.72■■□□□ 1.87
PMPCA-212ENST00000622209 DCPSQ96C86 337 aaKnown RBP26.72■■□□□ 1.87
PMPCA-212ENST00000622209 SMC4Q9NTJ3 1288 aa26.72■■□□□ 1.87
PMPCA-212ENST00000622209 H7C1W4 665 aa26.71■■□□□ 1.87
PMPCA-212ENST00000622209 BRPF1P55201 1214 aaPredicted RBP26.71■■□□□ 1.87
PMPCA-212ENST00000622209 ADM5C9JUS6 153 aa26.7■■□□□ 1.86
PMPCA-212ENST00000622209 F6X3S4 739 aa26.7■■□□□ 1.86
PMPCA-212ENST00000622209 MAP2K2P36507 400 aa26.7■■□□□ 1.86
PMPCA-212ENST00000622209 KIF4BQ2VIQ3 1234 aa26.7■■□□□ 1.86
PMPCA-212ENST00000622209 MINPP1Q9UNW1 487 aa26.7■■□□□ 1.86
PMPCA-212ENST00000622209 RARSP54136 660 aaKnown RBP26.69■■□□□ 1.86
PMPCA-212ENST00000622209 RSBN1LQ6PCB5 846 aaPredicted RBP26.69■■□□□ 1.86
PMPCA-212ENST00000622209 HHIPL1Q96JK4 782 aa26.69■■□□□ 1.86
PMPCA-212ENST00000622209 BSDC1Q9NW68 430 aaPredicted RBP26.69■■□□□ 1.86
PMPCA-212ENST00000622209 HUNKP57058 714 aa26.68■■□□□ 1.86
PMPCA-212ENST00000622209 GCKRQ14397 625 aa26.68■■□□□ 1.86
PMPCA-212ENST00000622209 BEND3Q5T5X7 828 aa26.68■■□□□ 1.86
PMPCA-212ENST00000622209 TSKSQ9UJT2 592 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms