RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 NOS1P29475 1434 aa11.27□□□□□ -0.61
COL4A6-210ENST00000621266 WDHD1O75717 1129 aaPredicted RBP11.27□□□□□ -0.61
COL4A6-210ENST00000621266 IDH1O75874 414 aaKnown RBP11.27□□□□□ -0.61
COL4A6-210ENST00000621266 KIF20AO95235 890 aa11.27□□□□□ -0.61
COL4A6-210ENST00000621266 MAP2K2P36507 400 aa11.27□□□□□ -0.61
COL4A6-210ENST00000621266 DIXDC1Q155Q3 683 aa11.27□□□□□ -0.61
COL4A6-210ENST00000621266 LUC7L2Q9Y383 392 aaKnown RBP11.27□□□□□ -0.61
COL4A6-210ENST00000621266 AKR1B10O60218 316 aa11.26□□□□□ -0.61
COL4A6-210ENST00000621266 INPP5BP32019 993 aa11.26□□□□□ -0.61
COL4A6-210ENST00000621266 PPARDQ03181 441 aa11.26□□□□□ -0.61
COL4A6-210ENST00000621266 CERS3Q8IU89 383 aa11.26□□□□□ -0.61
COL4A6-210ENST00000621266 ANKRD24Q8TF21 1146 aa11.26□□□□□ -0.61
COL4A6-210ENST00000621266 RRAGDQ9NQL2 400 aaPredicted RBP11.26□□□□□ -0.61
COL4A6-210ENST00000621266 SCAF11Q99590 1463 aaKnown RBP11.26□□□□□ -0.61
COL4A6-210ENST00000621266 HDXQ7Z353 690 aa11.26□□□□□ -0.61
COL4A6-210ENST00000621266 AOPEPQ8N6M6 819 aa11.26□□□□□ -0.61
COL4A6-210ENST00000621266 TTC14Q96N46 770 aa11.26□□□□□ -0.61
COL4A6-210ENST00000621266 STMN4Q9H169 189 aaPredicted RBP11.26□□□□□ -0.61
COL4A6-210ENST00000621266 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.26□□□□□ -0.61
COL4A6-210ENST00000621266 TLDC2A0PJX2 215 aa11.26□□□□□ -0.61
COL4A6-210ENST00000621266 TRIM21P19474 475 aaKnown RBP11.26□□□□□ -0.61
COL4A6-210ENST00000621266 CEP85LQ5SZL2 805 aa11.26□□□□□ -0.61
COL4A6-210ENST00000621266 DUSP27Q5VZP5 1158 aa11.26□□□□□ -0.61
COL4A6-210ENST00000621266 AFAP1L1Q8TED9 768 aa11.26□□□□□ -0.61
COL4A6-210ENST00000621266 SETDB1Q15047 1291 aa11.26□□□□□ -0.61
COL4A6-210ENST00000621266 CRACR2BQ8N4Y2 399 aaPredicted RBP11.26□□□□□ -0.61
COL4A6-210ENST00000621266 RBM28Q9NW13 759 aaKnown RBP11.26□□□□□ -0.61
COL4A6-210ENST00000621266 MAP7D1Q3KQU3 841 aa11.26□□□□□ -0.61
COL4A6-210ENST00000621266 DNAJC25Q9H1X3 360 aa11.26□□□□□ -0.61
COL4A6-210ENST00000621266 C14orf93Q9H972 538 aaKnown RBP11.26□□□□□ -0.61
COL4A6-210ENST00000621266 TRMT112Q9UI30 125 aaKnown RBP11.26□□□□□ -0.61
COL4A6-210ENST00000621266 RASAL2Q9UJF2 1139 aa11.26□□□□□ -0.61
COL4A6-210ENST00000621266 U3KPZ7 1027 aaPredicted RBP11.26□□□□□ -0.61
COL4A6-210ENST00000621266 FERMT2Q96AC1 680 aa11.25□□□□□ -0.61
COL4A6-210ENST00000621266 SSRP1Q08945 709 aaKnown RBP11.25□□□□□ -0.61
COL4A6-210ENST00000621266 USP48Q86UV5 1035 aa11.25□□□□□ -0.61
COL4A6-210ENST00000621266 AIDAQ96BJ3 306 aa11.25□□□□□ -0.61
COL4A6-210ENST00000621266 LZTFL1Q9NQ48 299 aa11.25□□□□□ -0.61
COL4A6-210ENST00000621266 GOLIM4O00461 696 aa11.25□□□□□ -0.61
COL4A6-210ENST00000621266 IFI16Q16666 785 aaKnown RBP11.25□□□□□ -0.61
COL4A6-210ENST00000621266 LRCH2Q5VUJ6 765 aa11.25□□□□□ -0.61
COL4A6-210ENST00000621266 SELENOOQ9BVL4 669 aa11.25□□□□□ -0.61
COL4A6-210ENST00000621266 TTC36A6NLP5 189 aa11.25□□□□□ -0.61
COL4A6-210ENST00000621266 ARL1P40616 181 aaPredicted RBP11.25□□□□□ -0.61
COL4A6-210ENST00000621266 METTL24Q5JXM2 366 aa11.25□□□□□ -0.61
COL4A6-210ENST00000621266 CCDC144CPQ8IYA2 1237 aa11.25□□□□□ -0.61
COL4A6-210ENST00000621266 RGS22Q8NE09 1264 aa11.25□□□□□ -0.61
COL4A6-210ENST00000621266 SREK1Q8WXA9 508 aaKnown RBP11.25□□□□□ -0.61
COL4A6-210ENST00000621266 BOLA2Q9H3K6 86 aa11.25□□□□□ -0.61
COL4A6-210ENST00000621266 PHAXQ9H814 394 aaKnown RBP11.25□□□□□ -0.61
COL4A6-210ENST00000621266 RPRD2Q5VT52 1461 aaKnown RBP11.25□□□□□ -0.61
COL4A6-210ENST00000621266 ZNF853P0CG23 659 aa11.25□□□□□ -0.61
COL4A6-210ENST00000621266 HPDP32754 393 aaPredicted RBP11.25□□□□□ -0.61
COL4A6-210ENST00000621266 GCKP35557 465 aa11.25□□□□□ -0.61
COL4A6-210ENST00000621266 ZNF569Q5MCW4 686 aa11.25□□□□□ -0.61
COL4A6-210ENST00000621266 THUMPD2Q9BTF0 503 aaKnown RBP11.25□□□□□ -0.61
COL4A6-210ENST00000621266 SEC63Q9UGP8 760 aaKnown RBP11.25□□□□□ -0.61
COL4A6-210ENST00000621266 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.25□□□□□ -0.61
COL4A6-210ENST00000621266 PPM1FP49593 454 aaPredicted RBP11.25□□□□□ -0.61
COL4A6-210ENST00000621266 RBM26Q5T8P6 1007 aaKnown RBP11.25□□□□□ -0.61
COL4A6-210ENST00000621266 RNF168Q8IYW5 571 aaPredicted RBP11.25□□□□□ -0.61
COL4A6-210ENST00000621266 EMILIN1Q9Y6C2 1016 aa11.25□□□□□ -0.61
COL4A6-210ENST00000621266 TACC1O75410 805 aa11.24□□□□□ -0.61
COL4A6-210ENST00000621266 VIMP08670 466 aaKnown RBP11.24□□□□□ -0.61
COL4A6-210ENST00000621266 GBP1P32455 592 aa11.24□□□□□ -0.61
COL4A6-210ENST00000621266 TAF7Q15545 349 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-210ENST00000621266 HGSO14964 777 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-210ENST00000621266 CYLC1P35663 651 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-210ENST00000621266 INTS8Q75QN2 995 aaKnown RBP11.24□□□□□ -0.61
COL4A6-210ENST00000621266 CACNA2D3Q8IZS8 1091 aa11.24□□□□□ -0.61
COL4A6-210ENST00000621266 DDX17Q92841 729 aaKnown RBP11.24□□□□□ -0.61
COL4A6-210ENST00000621266 GPATCH8Q9UKJ3 1502 aaKnown RBP11.24□□□□□ -0.61
COL4A6-210ENST00000621266 GOLGA8BA8MQT2 603 aa11.24□□□□□ -0.61
COL4A6-210ENST00000621266 CIB2O75838 187 aa11.24□□□□□ -0.61
COL4A6-210ENST00000621266 TMEM110-MUSTN1A8MSY1 372 aa11.24□□□□□ -0.61
COL4A6-210ENST00000621266 MINDY4BA8MYZ0 360 aa11.24□□□□□ -0.61
COL4A6-210ENST00000621266 B4GALNT4Q76KP1 1039 aa11.24□□□□□ -0.61
COL4A6-210ENST00000621266 UBLCP1Q8WVY7 318 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-210ENST00000621266 TRIM47Q96LD4 638 aa11.24□□□□□ -0.61
COL4A6-210ENST00000621266 NSD2O96028 1365 aa11.24□□□□□ -0.61
COL4A6-210ENST00000621266 RAPGEF6Q8TEU7 1601 aa11.23□□□□□ -0.61
COL4A6-210ENST00000621266 RAB11FIP4Q86YS3 637 aa11.23□□□□□ -0.61
COL4A6-210ENST00000621266 MAP3K9P80192 1104 aa11.23□□□□□ -0.61
COL4A6-210ENST00000621266 ALDH1L2Q3SY69 923 aa11.23□□□□□ -0.61
COL4A6-210ENST00000621266 TBC1D9Q6ZT07 1266 aa11.23□□□□□ -0.61
COL4A6-210ENST00000621266 CCDC77Q9BR77 488 aa11.23□□□□□ -0.61
COL4A6-210ENST00000621266 ZBTB3Q9H5J0 574 aa11.23□□□□□ -0.61
COL4A6-210ENST00000621266 GUCA1BQ9UMX6 200 aa11.23□□□□□ -0.61
COL4A6-210ENST00000621266 THOC2Q8NI27 1593 aaKnown RBP11.23□□□□□ -0.61
COL4A6-210ENST00000621266 IDEP14735 1019 aa11.23□□□□□ -0.61
COL4A6-210ENST00000621266 DDB1Q16531 1140 aa11.23□□□□□ -0.61
COL4A6-210ENST00000621266 POTEDQ86YR6 584 aa11.23□□□□□ -0.61
COL4A6-210ENST00000621266 TCHPQ9BT92 498 aa11.23□□□□□ -0.61
COL4A6-210ENST00000621266 NLRP5P59047 1200 aa11.23□□□□□ -0.61
COL4A6-210ENST00000621266 CCDC25Q86WR0 208 aa11.23□□□□□ -0.61
COL4A6-210ENST00000621266 FAM200AQ8TCP9 573 aa11.23□□□□□ -0.61
COL4A6-210ENST00000621266 NDUFAB1O14561 156 aa11.23□□□□□ -0.61
COL4A6-210ENST00000621266 CASQ2O14958 399 aaPredicted RBP11.23□□□□□ -0.61
COL4A6-210ENST00000621266 ACTN2P35609 894 aa11.23□□□□□ -0.61
COL4A6-210ENST00000621266 SF3A3Q12874 501 aaKnown RBP eCLIP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms