RNA–Protein interactions for RNA: ENST00000618002.4

RPH3AL-222, Transcript of rabphilin 3A like (without C2 domains), humanhuman

APPRIS P2 TSL 5 BASIC

Gene RPH3AL, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-222ENST00000618002 PXDNQ92626 1479 aa20.36■□□□□ 0.85
RPH3AL-222ENST00000618002 LMO7Q8WWI1 1683 aa20.36■□□□□ 0.85
RPH3AL-222ENST00000618002 SKILP12757 684 aa20.36■□□□□ 0.85
RPH3AL-222ENST00000618002 ATP5JP18859 108 aa20.36■□□□□ 0.85
RPH3AL-222ENST00000618002 FOSBP53539 338 aa20.36■□□□□ 0.85
RPH3AL-222ENST00000618002 SNW1Q13573 536 aaKnown RBP20.36■□□□□ 0.85
RPH3AL-222ENST00000618002 PLPPR3Q6T4P5 718 aa20.35■□□□□ 0.85
RPH3AL-222ENST00000618002 RIC3Q7Z5B4 369 aa20.35■□□□□ 0.85
RPH3AL-222ENST00000618002 PHF8Q9UPP1 1060 aa20.35■□□□□ 0.85
RPH3AL-222ENST00000618002 CTAGE5O15320 804 aa20.35■□□□□ 0.85
RPH3AL-222ENST00000618002 NEMFO60524 1076 aa20.35■□□□□ 0.85
RPH3AL-222ENST00000618002 NYAP1Q6ZVC0 841 aa20.35■□□□□ 0.85
RPH3AL-222ENST00000618002 DHX40Q8IX18 779 aaKnown RBP20.35■□□□□ 0.85
RPH3AL-222ENST00000618002 U3KPZ7 1027 aaPredicted RBP20.35■□□□□ 0.85
RPH3AL-222ENST00000618002 FILIP1Q7Z7B0 1213 aa20.34■□□□□ 0.85
RPH3AL-222ENST00000618002 ARHGAP23Q9P227 1491 aa20.34■□□□□ 0.85
RPH3AL-222ENST00000618002 NFAT5O94916 1531 aa20.34■□□□□ 0.85
RPH3AL-222ENST00000618002 BECN2A8MW95 431 aa20.34■□□□□ 0.85
RPH3AL-222ENST00000618002 PTPN14Q15678 1187 aa20.34■□□□□ 0.85
RPH3AL-222ENST00000618002 ZNF609O15014 1411 aa20.33■□□□□ 0.85
RPH3AL-222ENST00000618002 CCDC69A6NI79 296 aa20.33■□□□□ 0.85
RPH3AL-222ENST00000618002 NEURL1BA8MQ27 555 aa20.33■□□□□ 0.85
RPH3AL-222ENST00000618002 PFKFB2O60825 505 aa20.33■□□□□ 0.85
RPH3AL-222ENST00000618002 STOX1Q6ZVD7 989 aa20.33■□□□□ 0.85
RPH3AL-222ENST00000618002 NSUN7Q8NE18 718 aaKnown RBP20.33■□□□□ 0.85
RPH3AL-222ENST00000618002 ZNF215Q9UL58 517 aaPredicted RBP20.33■□□□□ 0.85
RPH3AL-222ENST00000618002 RGPD2P0DJD1 1756 aa20.33■□□□□ 0.84
RPH3AL-222ENST00000618002 CTDNEP1O95476 244 aa20.33■□□□□ 0.84
RPH3AL-222ENST00000618002 CCZ1BP86790 482 aa20.33■□□□□ 0.84
RPH3AL-222ENST00000618002 CCZ1P86791 482 aaPredicted RBP20.33■□□□□ 0.84
RPH3AL-222ENST00000618002 FGD1P98174 961 aa20.33■□□□□ 0.84
RPH3AL-222ENST00000618002 TFCP2Q12800 502 aa20.33■□□□□ 0.84
RPH3AL-222ENST00000618002 GCKRQ14397 625 aa20.33■□□□□ 0.84
RPH3AL-222ENST00000618002 NAA16Q6N069 864 aaPredicted RBP20.33■□□□□ 0.84
RPH3AL-222ENST00000618002 KIF18AQ8NI77 898 aa20.33■□□□□ 0.84
RPH3AL-222ENST00000618002 USP28Q96RU2 1077 aa20.33■□□□□ 0.84
RPH3AL-222ENST00000618002 DNAJC2Q99543 621 aaKnown RBP20.33■□□□□ 0.84
RPH3AL-222ENST00000618002 TNNI3KQ59H18 835 aa20.32■□□□□ 0.84
RPH3AL-222ENST00000618002 ENGASEQ8NFI3 743 aa20.32■□□□□ 0.84
RPH3AL-222ENST00000618002 LLPHQ9BRT6 129 aaKnown RBP20.32■□□□□ 0.84
RPH3AL-222ENST00000618002 TRMT1Q9NXH9 659 aaKnown RBP20.32■□□□□ 0.84
RPH3AL-222ENST00000618002 MORC2Q9Y6X9 1032 aaPredicted RBP20.32■□□□□ 0.84
RPH3AL-222ENST00000618002 FPGT-TNNI3KV9GXZ4 949 aa20.32■□□□□ 0.84
RPH3AL-222ENST00000618002 MRC1P22897 1456 aa20.32■□□□□ 0.84
RPH3AL-222ENST00000618002 MCMDC2Q4G0Z9 681 aa20.32■□□□□ 0.84
RPH3AL-222ENST00000618002 CCDC73Q6ZRK6 1079 aa20.32■□□□□ 0.84
RPH3AL-222ENST00000618002 ERCC4Q92889 916 aaPredicted RBP20.32■□□□□ 0.84
RPH3AL-222ENST00000618002 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.32■□□□□ 0.84
RPH3AL-222ENST00000618002 V9GYY5 206 aaPredicted RBP20.32■□□□□ 0.84
RPH3AL-222ENST00000618002 COPRSQ9NQ92 184 aa20.31■□□□□ 0.84
RPH3AL-222ENST00000618002 KINO60870 393 aaKnown RBP20.31■□□□□ 0.84
RPH3AL-222ENST00000618002 MYL6BP14649 208 aa20.31■□□□□ 0.84
RPH3AL-222ENST00000618002 NCAPD2Q15021 1401 aa20.3■□□□□ 0.84
RPH3AL-222ENST00000618002 PTPDC1A2A3K4 754 aa20.3■□□□□ 0.84
RPH3AL-222ENST00000618002 PPFIA3O75145 1194 aa20.3■□□□□ 0.84
RPH3AL-222ENST00000618002 FAM160A1Q05DH4 1040 aa20.3■□□□□ 0.84
RPH3AL-222ENST00000618002 APOBRQ0VD83 1088 aa20.3■□□□□ 0.84
RPH3AL-222ENST00000618002 NEXNQ0ZGT2 675 aa20.3■□□□□ 0.84
RPH3AL-222ENST00000618002 KMT5BQ4FZB7 885 aa20.3■□□□□ 0.84
RPH3AL-222ENST00000618002 MYD88Q99836 296 aa20.3■□□□□ 0.84
RPH3AL-222ENST00000618002 ANO10Q9NW15 660 aa20.3■□□□□ 0.84
RPH3AL-222ENST00000618002 RFX5P48382 616 aaPredicted RBP20.3■□□□□ 0.84
RPH3AL-222ENST00000618002 PTPN12Q05209 780 aaKnown RBP20.3■□□□□ 0.84
RPH3AL-222ENST00000618002 DDX46Q7L014 1031 aaKnown RBP20.3■□□□□ 0.84
RPH3AL-222ENST00000618002 CCAR2Q8N163 923 aaKnown RBP20.3■□□□□ 0.84
RPH3AL-222ENST00000618002 CCT2P78371 535 aaKnown RBP20.29■□□□□ 0.84
RPH3AL-222ENST00000618002 KCNH5Q8NCM2 988 aa20.29■□□□□ 0.84
RPH3AL-222ENST00000618002 FBXW7Q969H0 707 aa20.29■□□□□ 0.84
RPH3AL-222ENST00000618002 DBNDD2Q9BQY9 259 aa20.29■□□□□ 0.84
RPH3AL-222ENST00000618002 ZNF771Q7L3S4 317 aaPredicted RBP20.29■□□□□ 0.84
RPH3AL-222ENST00000618002 DHX32Q7L7V1 743 aaKnown RBP20.29■□□□□ 0.84
RPH3AL-222ENST00000618002 AOPEPQ8N6M6 819 aa20.29■□□□□ 0.84
RPH3AL-222ENST00000618002 FSIP1Q8NA03 581 aa20.29■□□□□ 0.84
RPH3AL-222ENST00000618002 XAGE3Q8WTP9 111 aa20.29■□□□□ 0.84
RPH3AL-222ENST00000618002 ME1P48163 572 aa20.28■□□□□ 0.84
RPH3AL-222ENST00000618002 GABPB1Q06547 395 aaPredicted RBP20.28■□□□□ 0.84
RPH3AL-222ENST00000618002 ILDR1Q86SU0 546 aaPredicted RBP20.28■□□□□ 0.84
RPH3AL-222ENST00000618002 ZNF397Q8NF99 534 aaPredicted RBP20.28■□□□□ 0.84
RPH3AL-222ENST00000618002 NCOA5Q9HCD5 579 aaKnown RBP20.28■□□□□ 0.84
RPH3AL-222ENST00000618002 OVOS2A0A0G2JMS6 1433 aa20.28■□□□□ 0.84
RPH3AL-222ENST00000618002 GUCY1B3Q02153 619 aa20.28■□□□□ 0.84
RPH3AL-222ENST00000618002 SLC39A6Q13433 755 aa20.28■□□□□ 0.84
RPH3AL-222ENST00000618002 COPS6Q7L5N1 327 aa20.28■□□□□ 0.84
RPH3AL-222ENST00000618002 HAUS7Q99871 368 aa20.28■□□□□ 0.84
RPH3AL-222ENST00000618002 PSME1Q06323 249 aa20.27■□□□□ 0.84
RPH3AL-222ENST00000618002 SLFNL1Q499Z3 407 aa20.27■□□□□ 0.84
RPH3AL-222ENST00000618002 CEP57L1Q8IYX8 460 aa20.27■□□□□ 0.84
RPH3AL-222ENST00000618002 THEMISQ8N1K5 641 aaPredicted RBP20.27■□□□□ 0.84
RPH3AL-222ENST00000618002 ZNF396Q96N95 335 aaPredicted RBP20.27■□□□□ 0.84
RPH3AL-222ENST00000618002 METTL22Q9BUU2 404 aaPredicted RBP20.27■□□□□ 0.84
RPH3AL-222ENST00000618002 HMGB1P09429 215 aaKnown RBP20.27■□□□□ 0.83
RPH3AL-222ENST00000618002 NBPF11Q86T75 865 aa20.27■□□□□ 0.83
RPH3AL-222ENST00000618002 RFX7Q2KHR2 1363 aa20.26■□□□□ 0.83
RPH3AL-222ENST00000618002 SLFN14P0C7P3 912 aa20.26■□□□□ 0.83
RPH3AL-222ENST00000618002 RBM33Q96EV2 1170 aaKnown RBP20.26■□□□□ 0.83
RPH3AL-222ENST00000618002 CCDC9Q9Y3X0 531 aaKnown RBP20.26■□□□□ 0.83
RPH3AL-222ENST00000618002 EXOSC10Q01780 885 aaKnown RBP20.26■□□□□ 0.83
RPH3AL-222ENST00000618002 ATL3Q6DD88 541 aa20.26■□□□□ 0.83
RPH3AL-222ENST00000618002 ERO1AQ96HE7 468 aa20.26■□□□□ 0.83
RPH3AL-222ENST00000618002 KCND1Q9NSA2 647 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms