RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 NFATC2IPQ8NCF5 419 aa20.59■□□□□ 0.89
DDX1-207ENST00000617198 DBNDD2Q9BQY9 259 aa20.59■□□□□ 0.89
DDX1-207ENST00000617198 NRBP1Q9UHY1 535 aa20.59■□□□□ 0.89
DDX1-207ENST00000617198 RGPD5Q99666 1765 aa20.59■□□□□ 0.89
DDX1-207ENST00000617198 CHGBP05060 677 aa20.58■□□□□ 0.89
DDX1-207ENST00000617198 LRMPQ12912 555 aa20.58■□□□□ 0.89
DDX1-207ENST00000617198 ZSCAN25Q6NSZ9 544 aa20.58■□□□□ 0.89
DDX1-207ENST00000617198 UBE3BQ7Z3V4 1068 aa20.58■□□□□ 0.89
DDX1-207ENST00000617198 RAPGEF4Q8WZA2 1011 aa20.58■□□□□ 0.89
DDX1-207ENST00000617198 ZNF496Q96IT1 587 aaPredicted RBP20.58■□□□□ 0.89
DDX1-207ENST00000617198 CTIFO43310 598 aaKnown RBP20.58■□□□□ 0.88
DDX1-207ENST00000617198 HMGB1P09429 215 aaKnown RBP20.58■□□□□ 0.88
DDX1-207ENST00000617198 AFDNP55196 1824 aaKnown RBP20.58■□□□□ 0.88
DDX1-207ENST00000617198 FGD1P98174 961 aa20.58■□□□□ 0.88
DDX1-207ENST00000617198 PFKFB2O60825 505 aa20.57■□□□□ 0.88
DDX1-207ENST00000617198 NAA16Q6N069 864 aaPredicted RBP20.57■□□□□ 0.88
DDX1-207ENST00000617198 DDX46Q7L014 1031 aaKnown RBP20.57■□□□□ 0.88
DDX1-207ENST00000617198 KBTBD3Q8NAB2 608 aa20.57■□□□□ 0.88
DDX1-207ENST00000617198 LRRC2Q9BYS8 371 aa20.57■□□□□ 0.88
DDX1-207ENST00000617198 CLIP2Q9UDT6 1046 aa20.57■□□□□ 0.88
DDX1-207ENST00000617198 SH3TC1Q8TE82 1336 aa20.56■□□□□ 0.88
DDX1-207ENST00000617198 PHKG2P15735 406 aa20.56■□□□□ 0.88
DDX1-207ENST00000617198 CDC25BP30305 580 aa20.56■□□□□ 0.88
DDX1-207ENST00000617198 ADD1P35611 737 aaKnown RBP20.56■□□□□ 0.88
DDX1-207ENST00000617198 PPP4R3BQ5MIZ7 849 aa20.56■□□□□ 0.88
DDX1-207ENST00000617198 STOX1Q6ZVD7 989 aa20.56■□□□□ 0.88
DDX1-207ENST00000617198 TRPM3Q9HCF6 1732 aaPredicted RBP20.56■□□□□ 0.88
DDX1-207ENST00000617198 MYH15Q9Y2K3 1946 aa20.56■□□□□ 0.88
DDX1-207ENST00000617198 CTAGE5O15320 804 aa20.56■□□□□ 0.88
DDX1-207ENST00000617198 SNRPA1P09661 255 aaKnown RBP20.56■□□□□ 0.88
DDX1-207ENST00000617198 DHX32Q7L7V1 743 aaKnown RBP20.56■□□□□ 0.88
DDX1-207ENST00000617198 NSUN7Q8NE18 718 aaKnown RBP20.56■□□□□ 0.88
DDX1-207ENST00000617198 ANKRD7Q92527 254 aa20.56■□□□□ 0.88
DDX1-207ENST00000617198 USP16Q9Y5T5 823 aa20.56■□□□□ 0.88
DDX1-207ENST00000617198 PDCL2Q8N4E4 241 aa20.55■□□□□ 0.88
DDX1-207ENST00000617198 RCOR1Q9UKL0 485 aa20.55■□□□□ 0.88
DDX1-207ENST00000617198 PRDM4Q9UKN5 801 aa20.55■□□□□ 0.88
DDX1-207ENST00000617198 LAMA4Q16363 1823 aa20.55■□□□□ 0.88
DDX1-207ENST00000617198 A0A087WZG4 1122 aa20.55■□□□□ 0.88
DDX1-207ENST00000617198 GOLGA6L19H0YKK7 550 aa20.55■□□□□ 0.88
DDX1-207ENST00000617198 CEBPZQ03701 1054 aaKnown RBP20.55■□□□□ 0.88
DDX1-207ENST00000617198 IQCB1Q15051 598 aa20.55■□□□□ 0.88
DDX1-207ENST00000617198 SARM1Q6SZW1 724 aa20.54■□□□□ 0.88
DDX1-207ENST00000617198 C16orf45Q96MC5 204 aaPredicted RBP20.54■□□□□ 0.88
DDX1-207ENST00000617198 PALLDQ8WX93 1383 aa20.54■□□□□ 0.88
DDX1-207ENST00000617198 TATP17735 454 aaPredicted RBP20.53■□□□□ 0.88
DDX1-207ENST00000617198 PIP4K2AP48426 406 aaPredicted RBP20.53■□□□□ 0.88
DDX1-207ENST00000617198 KRT28Q7Z3Y7 464 aa20.53■□□□□ 0.88
DDX1-207ENST00000617198 CCAR1Q8IX12 1150 aaKnown RBP20.53■□□□□ 0.88
DDX1-207ENST00000617198 TTC5Q8N0Z6 440 aa20.53■□□□□ 0.88
DDX1-207ENST00000617198 CACTINQ8WUQ7 758 aaKnown RBP20.53■□□□□ 0.88
DDX1-207ENST00000617198 ARFGEF2Q9Y6D5 1785 aa20.53■□□□□ 0.88
DDX1-207ENST00000617198 PTPDC1A2A3K4 754 aa20.53■□□□□ 0.88
DDX1-207ENST00000617198 CTDNEP1O95476 244 aa20.53■□□□□ 0.88
DDX1-207ENST00000617198 STX1AQ16623 288 aa20.53■□□□□ 0.88
DDX1-207ENST00000617198 DSCC1Q9BVC3 393 aa20.53■□□□□ 0.88
DDX1-207ENST00000617198 HELLSQ9NRZ9 838 aa20.53■□□□□ 0.88
DDX1-207ENST00000617198 SMTNL1A8MU46 457 aa20.52■□□□□ 0.88
DDX1-207ENST00000617198 ATP5J2-PTCD1G3V325 749 aa20.52■□□□□ 0.88
DDX1-207ENST00000617198 PTCD1O75127 700 aaKnown RBP20.52■□□□□ 0.88
DDX1-207ENST00000617198 CCDC144BQ3MJ40 725 aa20.52■□□□□ 0.88
DDX1-207ENST00000617198 ATL3Q6DD88 541 aa20.52■□□□□ 0.88
DDX1-207ENST00000617198 CCDC144CPQ8IYA2 1237 aa20.52■□□□□ 0.88
DDX1-207ENST00000617198 NLRP2Q9NX02 1062 aa20.52■□□□□ 0.88
DDX1-207ENST00000617198 TNNT1P13805 278 aa20.52■□□□□ 0.88
DDX1-207ENST00000617198 CASP7P55210 303 aa20.52■□□□□ 0.88
DDX1-207ENST00000617198 ZC3H6P61129 1189 aaKnown RBP20.52■□□□□ 0.88
DDX1-207ENST00000617198 APOBRQ0VD83 1088 aa20.52■□□□□ 0.88
DDX1-207ENST00000617198 C11orf57Q6ZUT1 292 aaPredicted RBP20.52■□□□□ 0.88
DDX1-207ENST00000617198 IFNL2Q8IZJ0 200 aa20.52■□□□□ 0.88
DDX1-207ENST00000617198 AGXT2Q9BYV1 514 aa20.52■□□□□ 0.88
DDX1-207ENST00000617198 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.52■□□□□ 0.888e-8■■■□□ 14.6
DDX1-207ENST00000617198 EXOSC10Q01780 885 aaKnown RBP20.51■□□□□ 0.87
DDX1-207ENST00000617198 CCDC73Q6ZRK6 1079 aa20.51■□□□□ 0.87
DDX1-207ENST00000617198 ZNF396Q96N95 335 aaPredicted RBP20.51■□□□□ 0.87
DDX1-207ENST00000617198 LMBR1LQ6UX01 489 aa20.51■□□□□ 0.87
DDX1-207ENST00000617198 MRFAP1L1Q96HT8 127 aa20.51■□□□□ 0.87
DDX1-207ENST00000617198 FMNL2Q96PY5 1086 aa20.51■□□□□ 0.87
DDX1-207ENST00000617198 FTOQ9C0B1 505 aaKnown RBP eCLIP20.51■□□□□ 0.87
DDX1-207ENST00000617198 GOLPH3LQ9H4A5 285 aa20.51■□□□□ 0.87
DDX1-207ENST00000617198 PRDM10Q9NQV6 1147 aa20.51■□□□□ 0.87
DDX1-207ENST00000617198 GOLIM4O00461 696 aa20.5■□□□□ 0.87
DDX1-207ENST00000617198 FOSBP53539 338 aa20.5■□□□□ 0.87
DDX1-207ENST00000617198 CBX1P83916 185 aa20.5■□□□□ 0.87
DDX1-207ENST00000617198 SNW1Q13573 536 aaKnown RBP20.5■□□□□ 0.87
DDX1-207ENST00000617198 ATP2B3Q16720 1220 aa20.5■□□□□ 0.87
DDX1-207ENST00000617198 TICAM2Q86XR7 235 aa20.5■□□□□ 0.87
DDX1-207ENST00000617198 USP28Q96RU2 1077 aa20.5■□□□□ 0.87
DDX1-207ENST00000617198 PAG1Q9NWQ8 432 aa20.5■□□□□ 0.87
DDX1-207ENST00000617198 PAXBP1Q9Y5B6 917 aa20.5■□□□□ 0.87
DDX1-207ENST00000617198 SYCP1Q15431 976 aa20.5■□□□□ 0.87
DDX1-207ENST00000617198 PLBD2Q8NHP8 589 aa20.5■□□□□ 0.87
DDX1-207ENST00000617198 CCDC9Q9Y3X0 531 aaKnown RBP20.5■□□□□ 0.87
DDX1-207ENST00000617198 SALL1Q9NSC2 1324 aa20.49■□□□□ 0.87
DDX1-207ENST00000617198 MEGF6O75095 1541 aa20.49■□□□□ 0.87
DDX1-207ENST00000617198 NEMFO60524 1076 aa20.49■□□□□ 0.87
DDX1-207ENST00000617198 KINO60870 393 aaKnown RBP20.49■□□□□ 0.87
DDX1-207ENST00000617198 CCT2P78371 535 aaKnown RBP20.49■□□□□ 0.87
DDX1-207ENST00000617198 TPD52L1Q16890 204 aaPredicted RBP20.49■□□□□ 0.87
DDX1-207ENST00000617198 LRRC8AQ8IWT6 810 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms