RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 XDHP47989 1333 aa28.04■■■□□ 2.08
CBWD3-212ENST00000616550 UFL1O94874 794 aa28.04■■■□□ 2.08
CBWD3-212ENST00000616550 TNIP1Q15025 636 aa28.04■■■□□ 2.08
CBWD3-212ENST00000616550 FAM161AQ3B820 660 aa28.04■■■□□ 2.08
CBWD3-212ENST00000616550 CIAPIN1Q6FI81 312 aa28.04■■■□□ 2.08
CBWD3-212ENST00000616550 SPEF2Q9C093 1822 aa28.04■■■□□ 2.08
CBWD3-212ENST00000616550 LTBP1Q14766 1721 aa28.04■■■□□ 2.08
CBWD3-212ENST00000616550 FOXO4P98177 505 aa28.03■■■□□ 2.08
CBWD3-212ENST00000616550 EAPPQ56P03 285 aaPredicted RBP28.03■■■□□ 2.08
CBWD3-212ENST00000616550 CHADLQ6NUI6 762 aa28.03■■■□□ 2.08
CBWD3-212ENST00000616550 PNMA8AQ86V59 439 aaPredicted RBP28.03■■■□□ 2.08
CBWD3-212ENST00000616550 MINPP1Q9UNW1 487 aa28.03■■■□□ 2.08
CBWD3-212ENST00000616550 ANKRD18BA2A2Z9 1011 aa28.02■■■□□ 2.08
CBWD3-212ENST00000616550 G3V3G9 751 aa28.02■■■□□ 2.08
CBWD3-212ENST00000616550 RAD17O75943 681 aa28.02■■■□□ 2.08
CBWD3-212ENST00000616550 POTEIP0CG38 1075 aa28.02■■■□□ 2.08
CBWD3-212ENST00000616550 POTEJP0CG39 1038 aa28.02■■■□□ 2.08
CBWD3-212ENST00000616550 ATP2B4P23634 1241 aa28.02■■■□□ 2.08
CBWD3-212ENST00000616550 DCAF8Q5TAQ9 597 aa28.02■■■□□ 2.08
CBWD3-212ENST00000616550 LDHDQ86WU2 507 aa28.02■■■□□ 2.08
CBWD3-212ENST00000616550 MPHOSPH8Q99549 860 aa28.02■■■□□ 2.08
CBWD3-212ENST00000616550 DBNDD1Q9H9R9 158 aa28.02■■■□□ 2.08
CBWD3-212ENST00000616550 CHMP3Q9Y3E7 222 aa28.02■■■□□ 2.08
CBWD3-212ENST00000616550 YDJCA8MPS7 323 aa28.01■■■□□ 2.07
CBWD3-212ENST00000616550 GPR101Q96P66 508 aaPredicted RBP28.01■■■□□ 2.07
CBWD3-212ENST00000616550 SCNN1DP51172 638 aa28■■■□□ 2.07
CBWD3-212ENST00000616550 IFIT5Q13325 482 aaKnown RBP28■■■□□ 2.07
CBWD3-212ENST00000616550 DOK7Q18PE1 504 aa28■■■□□ 2.07
CBWD3-212ENST00000616550 CLEC11AQ9Y240 323 aa28■■■□□ 2.07
CBWD3-212ENST00000616550 EPS15P42566 896 aa27.99■■■□□ 2.07
CBWD3-212ENST00000616550 LMBR1LQ6UX01 489 aa27.99■■■□□ 2.07
CBWD3-212ENST00000616550 ECE2O60344 883 aa27.98■■■□□ 2.07
CBWD3-212ENST00000616550 NBPF7P0C2Y1 421 aaPredicted RBP27.97■■■□□ 2.07
CBWD3-212ENST00000616550 BRPF1P55201 1214 aaPredicted RBP27.97■■■□□ 2.07
CBWD3-212ENST00000616550 EPHA10Q5JZY3 1008 aa27.97■■■□□ 2.07
CBWD3-212ENST00000616550 GPRC5DQ9NZD1 345 aa27.97■■■□□ 2.07
CBWD3-212ENST00000616550 UTYO14607 1347 aa27.96■■■□□ 2.07
CBWD3-212ENST00000616550 GMPSP49915 693 aaPredicted RBP27.96■■■□□ 2.07
CBWD3-212ENST00000616550 RARSP54136 660 aaKnown RBP27.96■■■□□ 2.07
CBWD3-212ENST00000616550 CCDC57Q2TAC2 916 aa27.96■■■□□ 2.07
CBWD3-212ENST00000616550 ANKRD2Q9GZV1 360 aa27.96■■■□□ 2.07
CBWD3-212ENST00000616550 NOB1Q9ULX3 412 aaKnown RBP27.96■■■□□ 2.07
CBWD3-212ENST00000616550 CCT4P50991 539 aaKnown RBP27.95■■■□□ 2.06
CBWD3-212ENST00000616550 TAF7LQ5H9L4 462 aa27.94■■■□□ 2.06
CBWD3-212ENST00000616550 SUCLG2Q96I99 432 aa27.94■■■□□ 2.06
CBWD3-212ENST00000616550 LEMD3Q9Y2U8 911 aa27.94■■■□□ 2.06
CBWD3-212ENST00000616550 PSMD14O00487 310 aa27.93■■■□□ 2.06
CBWD3-212ENST00000616550 USP50Q70EL3 339 aaPredicted RBP27.93■■■□□ 2.06
CBWD3-212ENST00000616550 API5Q9BZZ5 524 aaKnown RBP27.93■■■□□ 2.06
CBWD3-212ENST00000616550 KCNQ5Q9NR82 932 aa27.92■■■□□ 2.06
CBWD3-212ENST00000616550 ADARB2Q9NS39 739 aaKnown RBP27.92■■■□□ 2.06
CBWD3-212ENST00000616550 WTIPA6NIX2 430 aaPredicted RBP27.91■■■□□ 2.06
CBWD3-212ENST00000616550 CHRNDQ07001 517 aa27.91■■■□□ 2.06
CBWD3-212ENST00000616550 KAZALD1Q96I82 304 aa27.91■■■□□ 2.06
CBWD3-212ENST00000616550 USP44Q9H0E7 712 aa27.91■■■□□ 2.06
CBWD3-212ENST00000616550 MED23Q9ULK4 1368 aa27.9■■■□□ 2.06
CBWD3-212ENST00000616550 KCNJ4P48050 445 aa27.9■■■□□ 2.06
CBWD3-212ENST00000616550 LDHAL6AQ6ZMR3 332 aa27.9■■■□□ 2.06
CBWD3-212ENST00000616550 DPF2Q92785 391 aa27.9■■■□□ 2.06
CBWD3-212ENST00000616550 CNOT7Q9UIV1 285 aaKnown RBP27.9■■■□□ 2.06
CBWD3-212ENST00000616550 ADAMTSL1Q8N6G6 1762 aa27.9■■■□□ 2.06
CBWD3-212ENST00000616550 KIF16BQ96L93 1317 aa27.9■■■□□ 2.06
CBWD3-212ENST00000616550 H7C1D1 291 aa27.89■■■□□ 2.06
CBWD3-212ENST00000616550 HTRA3P83110 453 aa27.89■■■□□ 2.06
CBWD3-212ENST00000616550 PODNQ7Z5L7 613 aa27.89■■■□□ 2.06
CBWD3-212ENST00000616550 CNTROBQ8N137 903 aa27.89■■■□□ 2.06
CBWD3-212ENST00000616550 ZNF594Q96JF6 807 aaPredicted RBP27.89■■■□□ 2.06
CBWD3-212ENST00000616550 BICC1Q9H694 974 aaKnown RBP27.89■■■□□ 2.06
CBWD3-212ENST00000616550 ZBTB12Q9Y330 459 aaPredicted RBP27.89■■■□□ 2.06
CBWD3-212ENST00000616550 ZNF804BA4D1E1 1349 aa27.89■■■□□ 2.05
CBWD3-212ENST00000616550 RPS12P25398 132 aaKnown RBP27.88■■■□□ 2.05
CBWD3-212ENST00000616550 MAP1SQ66K74 1059 aaPredicted RBP27.88■■■□□ 2.05
CBWD3-212ENST00000616550 ARHGAP45Q92619 1136 aa27.88■■■□□ 2.05
CBWD3-212ENST00000616550 CNNM1Q9NRU3 951 aa27.88■■■□□ 2.05
CBWD3-212ENST00000616550 SCN9AQ15858 1988 aa27.88■■■□□ 2.05
CBWD3-212ENST00000616550 VIL1P09327 827 aaKnown RBP27.87■■■□□ 2.05
CBWD3-212ENST00000616550 ITGBL1O95965 494 aaPredicted RBP27.86■■■□□ 2.05
CBWD3-212ENST00000616550 RABL6Q3YEC7 729 aaPredicted RBP27.86■■■□□ 2.05
CBWD3-212ENST00000616550 MICALL2Q8IY33 904 aa27.86■■■□□ 2.05
CBWD3-212ENST00000616550 DNAJC5GQ8N7S2 189 aa27.86■■■□□ 2.05
CBWD3-212ENST00000616550 HELBQ8NG08 1087 aaPredicted RBP27.86■■■□□ 2.05
CBWD3-212ENST00000616550 ZBED9Q6R2W3 1325 aa27.86■■■□□ 2.05
CBWD3-212ENST00000616550 IPO8O15397 1037 aaKnown RBP27.85■■■□□ 2.05
CBWD3-212ENST00000616550 TAF5LO75529 589 aa27.85■■■□□ 2.05
CBWD3-212ENST00000616550 COA1Q9GZY4 146 aa27.85■■■□□ 2.05
CBWD3-212ENST00000616550 PASKQ96RG2 1323 aa27.85■■■□□ 2.05
CBWD3-212ENST00000616550 USP17L3A6NCW0 530 aa27.84■■■□□ 2.05
CBWD3-212ENST00000616550 USP17L4A6NCW7 530 aa27.84■■■□□ 2.05
CBWD3-212ENST00000616550 USP17L1Q7RTZ2 530 aa27.84■■■□□ 2.05
CBWD3-212ENST00000616550 ANKRD44Q8N8A2 993 aa27.84■■■□□ 2.05
CBWD3-212ENST00000616550 PLIN1O60240 522 aa27.83■■■□□ 2.05
CBWD3-212ENST00000616550 TXNRD3Q86VQ6 643 aa27.83■■■□□ 2.05
CBWD3-212ENST00000616550 CEP350Q5VT06 3117 aa27.83■■■□□ 2.04
CBWD3-212ENST00000616550 SHTN1A0MZ66 631 aa27.82■■■□□ 2.04
CBWD3-212ENST00000616550 BCAR3O75815 825 aa27.82■■■□□ 2.04
CBWD3-212ENST00000616550 RSBN1LQ6PCB5 846 aaPredicted RBP27.82■■■□□ 2.04
CBWD3-212ENST00000616550 PSME4Q14997 1843 aa27.81■■■□□ 2.04
CBWD3-212ENST00000616550 UBTFL1P0CB47 393 aaPredicted RBP27.81■■■□□ 2.04
CBWD3-212ENST00000616550 AGBL3Q8NEM8 1001 aa27.81■■■□□ 2.04
CBWD3-212ENST00000616550 FRAT1Q92837 279 aaPredicted RBP27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms