RNA–Protein interactions for RNA: ENST00000613916.1

PVT1-222, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 137 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-222	ENST00000613916	USPL1	Q5W0Q7	1092 aa		9.04	□□□□□ -0.96
PVT1-222	ENST00000613916	TBC1D9B	Q66K14	1250 aa		9.04	□□□□□ -0.96
PVT1-222	ENST00000613916	ATG9A	Q7Z3C6	839 aa		9.04	□□□□□ -0.96
PVT1-222	ENST00000613916	TTLL11	Q8NHH1	800 aa		9.04	□□□□□ -0.96
PVT1-222	ENST00000613916	NIP7	Q9Y221	180 aa	Known RBP eCLIP	9.04	□□□□□ -0.96
PVT1-222	ENST00000613916	ZNF652	Q9Y2D9	606 aa		9.04	□□□□□ -0.96
PVT1-222	ENST00000613916	USP42	Q9H9J4	1324 aa	Known RBP	9.04	□□□□□ -0.96
PVT1-222	ENST00000613916	POTEC	B2RU33	542 aa		9.03	□□□□□ -0.96
PVT1-222	ENST00000613916	PDE8A	O60658	829 aa		9.03	□□□□□ -0.96
PVT1-222	ENST00000613916	SEC24B	O95487	1268 aa		9.03	□□□□□ -0.96
PVT1-222	ENST00000613916	RFC4	P35249	363 aa		9.03	□□□□□ -0.96
PVT1-222	ENST00000613916	RASSF7	Q02833	373 aa		9.03	□□□□□ -0.96
PVT1-222	ENST00000613916	DDR1	Q08345	913 aa		9.03	□□□□□ -0.96
PVT1-222	ENST00000613916	G3BP1	Q13283	466 aa	Known RBP eCLIP	9.03	□□□□□ -0.96
PVT1-222	ENST00000613916	ERC1	Q8IUD2	1116 aa		9.03	□□□□□ -0.96
PVT1-222	ENST00000613916	ZNF594	Q96JF6	807 aa	Predicted RBP	9.03	□□□□□ -0.96
PVT1-222	ENST00000613916	UTP14A	Q9BVJ6	771 aa	Known RBP	9.03	□□□□□ -0.96
PVT1-222	ENST00000613916	SIL1	Q9H173	461 aa		9.03	□□□□□ -0.96
PVT1-222	ENST00000613916	ZBTB47	Q9UFB7	747 aa	Predicted RBP	9.03	□□□□□ -0.96
PVT1-222	ENST00000613916	AOX1	Q06278	1338 aa		9.03	□□□□□ -0.96
PVT1-222	ENST00000613916	SH3TC1	Q8TE82	1336 aa		9.03	□□□□□ -0.96
PVT1-222	ENST00000613916	MYH13	Q9UKX3	1938 aa		9.02	□□□□□ -0.97
PVT1-222	ENST00000613916	FAM177B	A6PVY3	158 aa		9.02	□□□□□ -0.97
PVT1-222	ENST00000613916	HCLS1	P14317	486 aa	Predicted RBP	9.02	□□□□□ -0.97
PVT1-222	ENST00000613916	MX1	P20591	662 aa		9.02	□□□□□ -0.97
PVT1-222	ENST00000613916	CHRNA5	P30532	468 aa		9.02	□□□□□ -0.97
PVT1-222	ENST00000613916	CTCF	P49711	727 aa	Predicted RBP	9.02	□□□□□ -0.97
PVT1-222	ENST00000613916	CTSW	P56202	376 aa		9.02	□□□□□ -0.97
PVT1-222	ENST00000613916	OS9	Q13438	667 aa	Predicted RBP	9.02	□□□□□ -0.97
PVT1-222	ENST00000613916	LRRC24	Q50LG9	513 aa		9.02	□□□□□ -0.97
PVT1-222	ENST00000613916	TSHZ3	Q63HK5	1081 aa		9.02	□□□□□ -0.97
PVT1-222	ENST00000613916	NUTM1	Q86Y26	1132 aa		9.02	□□□□□ -0.97
PVT1-222	ENST00000613916	EAF2	Q96CJ1	260 aa	Predicted RBP	9.02	□□□□□ -0.97
PVT1-222	ENST00000613916	PUS3	Q9BZE2	481 aa	Known RBP	9.02	□□□□□ -0.97
PVT1-222	ENST00000613916	BCL11A	Q9H165	835 aa		9.02	□□□□□ -0.97
PVT1-222	ENST00000613916	CHMP3	Q9Y3E7	222 aa		9.02	□□□□□ -0.97
PVT1-222	ENST00000613916	CACNA1S	Q13698	1873 aa		9.02	□□□□□ -0.97
PVT1-222	ENST00000613916	THSD7B	Q9C0I4	1608 aa		9.02	□□□□□ -0.97
PVT1-222	ENST00000613916	ABCC12	Q96J65	1359 aa		9.01	□□□□□ -0.97
PVT1-222	ENST00000613916	EYA2	O00167	538 aa		9.01	□□□□□ -0.97
PVT1-222	ENST00000613916	POLRMT	O00411	1230 aa	Known RBP	9.01	□□□□□ -0.97
PVT1-222	ENST00000613916	ZPR1	O75312	459 aa		9.01	□□□□□ -0.97
PVT1-222	ENST00000613916	TFCP2	Q12800	502 aa		9.01	□□□□□ -0.97
PVT1-222	ENST00000613916	RIC1	Q4ADV7	1423 aa		9.01	□□□□□ -0.97
PVT1-222	ENST00000613916	ERFE	Q4G0M1	354 aa		9.01	□□□□□ -0.97
PVT1-222	ENST00000613916	SLC10A5	Q5PT55	438 aa		9.01	□□□□□ -0.97
PVT1-222	ENST00000613916	PI4K2B	Q8TCG2	481 aa		9.01	□□□□□ -0.97
PVT1-222	ENST00000613916	CCDC85A	Q96PX6	553 aa	Predicted RBP	9.01	□□□□□ -0.97
PVT1-222	ENST00000613916	GREM2	Q9H772	168 aa		9.01	□□□□□ -0.97
PVT1-222	ENST00000613916	MKRN1	Q9UHC7	482 aa	Known RBP	9.01	□□□□□ -0.97
PVT1-222	ENST00000613916	RTL9	Q8NET4	1388 aa		9	□□□□□ -0.97
PVT1-222	ENST00000613916	DICER1	Q9UPY3	1922 aa	Known RBP	9	□□□□□ -0.97
PVT1-222	ENST00000613916	ZNF609	O15014	1411 aa		9	□□□□□ -0.97
PVT1-222	ENST00000613916	NFKBIE	O00221	500 aa		9	□□□□□ -0.97
PVT1-222	ENST00000613916	CIAO1	O76071	339 aa		9	□□□□□ -0.97
PVT1-222	ENST00000613916	SDS	P20132	328 aa		9	□□□□□ -0.97
PVT1-222	ENST00000613916	ITGA6	P23229	1130 aa		9	□□□□□ -0.97
PVT1-222	ENST00000613916	RGS19	P49795	217 aa		9	□□□□□ -0.97
PVT1-222	ENST00000613916	CCDC57	Q2TAC2	916 aa		9	□□□□□ -0.97
PVT1-222	ENST00000613916	BICDL1	Q6ZP65	573 aa		9	□□□□□ -0.97
PVT1-222	ENST00000613916	C3orf67	Q6ZVT6	689 aa		9	□□□□□ -0.97
PVT1-222	ENST00000613916	CLASRP	Q8N2M8	674 aa	Known RBP	9	□□□□□ -0.97
PVT1-222	ENST00000613916	ABHD8	Q96I13	439 aa		9	□□□□□ -0.97
PVT1-222	ENST00000613916	FBXO3	Q9UK99	471 aa		9	□□□□□ -0.97
PVT1-222	ENST00000613916	RIPOR2	Q9Y4F9	1068 aa		9	□□□□□ -0.97
PVT1-222	ENST00000613916	PASK	Q96RG2	1323 aa		9	□□□□□ -0.97
PVT1-222	ENST00000613916	TNRC18	O15417	2968 aa	Predicted RBP	9	□□□□□ -0.97
PVT1-222	ENST00000613916	DOCK2	Q92608	1830 aa		8.99	□□□□□ -0.97
PVT1-222	ENST00000613916	TM4SF1	P30408	202 aa		8.99	□□□□□ -0.97
PVT1-222	ENST00000613916	IL15	P40933	162 aa	Predicted RBP	8.99	□□□□□ -0.97
PVT1-222	ENST00000613916	IFIT5	Q13325	482 aa	Known RBP	8.99	□□□□□ -0.97
PVT1-222	ENST00000613916	NFIX	Q14938	502 aa		8.99	□□□□□ -0.97
PVT1-222	ENST00000613916	SF3B3	Q15393	1217 aa	Known RBP	8.99	□□□□□ -0.97
PVT1-222	ENST00000613916	TNNI3K	Q59H18	835 aa		8.99	□□□□□ -0.97
PVT1-222	ENST00000613916	CHADL	Q6NUI6	762 aa		8.99	□□□□□ -0.97
PVT1-222	ENST00000613916	AACS	Q86V21	672 aa		8.99	□□□□□ -0.97
PVT1-222	ENST00000613916	SETDB2	Q96T68	719 aa		8.99	□□□□□ -0.97
PVT1-222	ENST00000613916	CCDC8	Q9H0W5	538 aa	Predicted RBP	8.99	□□□□□ -0.97
PVT1-222	ENST00000613916	GPR108	Q9NPR9	543 aa		8.99	□□□□□ -0.97
PVT1-222	ENST00000613916	WBP1L	Q9NX94	342 aa		8.99	□□□□□ -0.97
PVT1-222	ENST00000613916	TLR7	Q9NYK1	1049 aa	Known RBP	8.99	□□□□□ -0.97
PVT1-222	ENST00000613916	FPGT-TNNI3K	V9GXZ4	949 aa		8.99	□□□□□ -0.97
PVT1-222	ENST00000613916	CCDC88A	Q3V6T2	1871 aa		8.99	□□□□□ -0.97
PVT1-222	ENST00000613916	TTC41P	Q6P2S7	1318 aa		8.99	□□□□□ -0.97
PVT1-222	ENST00000613916	FER1L6	Q2WGJ9	1857 aa		8.98	□□□□□ -0.97
PVT1-222	ENST00000613916	COL11A2	P13942	1736 aa	Predicted RBP	8.98	□□□□□ -0.97
PVT1-222	ENST00000613916	ANKRD18B	A2A2Z9	1011 aa		8.98	□□□□□ -0.97
PVT1-222	ENST00000613916	TBC1D9	Q6ZT07	1266 aa		8.98	□□□□□ -0.97
PVT1-222	ENST00000613916	VGLL2	Q8N8G2	317 aa		8.98	□□□□□ -0.97
PVT1-222	ENST00000613916	AIDA	Q96BJ3	306 aa		8.98	□□□□□ -0.97
PVT1-222	ENST00000613916	NYX	Q9GZU5	481 aa		8.98	□□□□□ -0.97
PVT1-222	ENST00000613916	SEC31B	Q9NQW1	1179 aa		8.98	□□□□□ -0.97
PVT1-222	ENST00000613916	DBNL	Q9UJU6	430 aa	Known RBP	8.98	□□□□□ -0.97
PVT1-222	ENST00000613916	ADAMTSL1	Q8N6G6	1762 aa		8.98	□□□□□ -0.97
PVT1-222	ENST00000613916	CARMIL3	Q8ND23	1372 aa		8.98	□□□□□ -0.97
PVT1-222	ENST00000613916	CDC45	O75419	566 aa		8.97	□□□□□ -0.97
PVT1-222	ENST00000613916	IFIT2	P09913	472 aa	Known RBP	8.97	□□□□□ -0.97
PVT1-222	ENST00000613916	HSP90B1	P14625	803 aa	Known RBP	8.97	□□□□□ -0.97
PVT1-222	ENST00000613916	LBX1	P52954	281 aa		8.97	□□□□□ -0.97
PVT1-222	ENST00000613916	MLLT1	Q03111	559 aa	Predicted RBP	8.97	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms