RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 ATP7AQ04656 1500 aa16.83■□□□□ 0.28
VPS36-207ENST00000611132 C10orf67Q8IYJ2 551 aa16.82■□□□□ 0.28
VPS36-207ENST00000611132 MYOM2P54296 1465 aa16.82■□□□□ 0.28
VPS36-207ENST00000611132 MYO6Q9UM54 1294 aa16.82■□□□□ 0.28
VPS36-207ENST00000611132 MYL5Q02045 173 aa16.82■□□□□ 0.28
VPS36-207ENST00000611132 THEMISQ8N1K5 641 aaPredicted RBP16.82■□□□□ 0.28
VPS36-207ENST00000611132 SSH3Q8TE77 659 aa16.82■□□□□ 0.28
VPS36-207ENST00000611132 ANKRD24Q8TF21 1146 aa16.82■□□□□ 0.28
VPS36-207ENST00000611132 ALG1Q9BT22 464 aa16.82■□□□□ 0.28
VPS36-207ENST00000611132 CARD6Q9BX69 1037 aa16.82■□□□□ 0.28
VPS36-207ENST00000611132 PTCH1Q13635 1447 aa16.82■□□□□ 0.28
VPS36-207ENST00000611132 SPA17Q15506 151 aa16.82■□□□□ 0.28
VPS36-207ENST00000611132 LLPHQ9BRT6 129 aaKnown RBP16.82■□□□□ 0.28
VPS36-207ENST00000611132 NR1I2O75469 434 aa16.81■□□□□ 0.28
VPS36-207ENST00000611132 TUBB4BP68371 445 aa16.81■□□□□ 0.28
VPS36-207ENST00000611132 CWF19L2Q2TBE0 894 aaKnown RBP16.81■□□□□ 0.28
VPS36-207ENST00000611132 SNRKQ9NRH2 765 aa16.81■□□□□ 0.28
VPS36-207ENST00000611132 VPS18Q9P253 973 aa16.81■□□□□ 0.28
VPS36-207ENST00000611132 MTMR7Q9Y216 660 aa16.81■□□□□ 0.28
VPS36-207ENST00000611132 ZDHHC9Q9Y397 364 aa16.81■□□□□ 0.28
VPS36-207ENST00000611132 MRVI1Q9Y6F6 885 aa16.81■□□□□ 0.28
VPS36-207ENST00000611132 NCKAP5LQ9HCH0 1330 aa16.81■□□□□ 0.28
VPS36-207ENST00000611132 KRBA2Q6ZNG9 492 aa16.81■□□□□ 0.28
VPS36-207ENST00000611132 BRAPQ7Z569 592 aa16.81■□□□□ 0.28
VPS36-207ENST00000611132 LRRC8AQ8IWT6 810 aa16.81■□□□□ 0.28
VPS36-207ENST00000611132 KLHL34Q8N239 644 aa16.81■□□□□ 0.28
VPS36-207ENST00000611132 MRFAP1L1Q96HT8 127 aa16.81■□□□□ 0.28
VPS36-207ENST00000611132 NAPBQ9H115 298 aa16.81■□□□□ 0.28
VPS36-207ENST00000611132 IFIT3O14879 490 aaKnown RBP16.81■□□□□ 0.28
VPS36-207ENST00000611132 ZNF853P0CG23 659 aa16.81■□□□□ 0.28
VPS36-207ENST00000611132 GTF2A1P52655 376 aaPredicted RBP16.81■□□□□ 0.28
VPS36-207ENST00000611132 KARSQ15046 597 aaKnown RBP16.81■□□□□ 0.28
VPS36-207ENST00000611132 HSP90AB3PQ58FF7 597 aa16.81■□□□□ 0.28
VPS36-207ENST00000611132 METTL24Q5JXM2 366 aa16.81■□□□□ 0.28
VPS36-207ENST00000611132 RASEFQ8IZ41 740 aa16.81■□□□□ 0.28
VPS36-207ENST00000611132 JARID2Q92833 1246 aaPredicted RBP16.81■□□□□ 0.28
VPS36-207ENST00000611132 ZSWIM6Q9HCJ5 1215 aa16.81■□□□□ 0.28
VPS36-207ENST00000611132 CYP2E1P05181 493 aaPredicted RBP16.8■□□□□ 0.28
VPS36-207ENST00000611132 UNC5CLQ8IV45 518 aa16.8■□□□□ 0.28
VPS36-207ENST00000611132 CDK5RAP3Q96JB5 506 aa16.8■□□□□ 0.28
VPS36-207ENST00000611132 USP44Q9H0E7 712 aa16.8■□□□□ 0.28
VPS36-207ENST00000611132 NRBP1Q9UHY1 535 aa16.8■□□□□ 0.28
VPS36-207ENST00000611132 AMOTL2Q9Y2J4 779 aa16.8■□□□□ 0.28
VPS36-207ENST00000611132 MAP3K5Q99683 1374 aa16.8■□□□□ 0.28
VPS36-207ENST00000611132 ERCC6LQ2NKX8 1250 aa16.8■□□□□ 0.28
VPS36-207ENST00000611132 MAP3K19Q56UN5 1328 aa16.8■□□□□ 0.28
VPS36-207ENST00000611132 N4BP3O15049 544 aa16.8■□□□□ 0.28
VPS36-207ENST00000611132 NBPF7P0C2Y1 421 aaPredicted RBP16.8■□□□□ 0.28
VPS36-207ENST00000611132 CCDC144CPQ8IYA2 1237 aa16.8■□□□□ 0.28
VPS36-207ENST00000611132 TDRD7Q8NHU6 1098 aaKnown RBP16.8■□□□□ 0.28
VPS36-207ENST00000611132 CTAGE9A4FU28 777 aa16.79■□□□□ 0.28
VPS36-207ENST00000611132 ATP5J2-PTCD1G3V325 749 aa16.79■□□□□ 0.28
VPS36-207ENST00000611132 JAK2O60674 1132 aa16.79■□□□□ 0.28
VPS36-207ENST00000611132 PTCD1O75127 700 aaKnown RBP16.79■□□□□ 0.28
VPS36-207ENST00000611132 CALRP27797 417 aaKnown RBP16.79■□□□□ 0.28
VPS36-207ENST00000611132 SYCP1Q15431 976 aa16.79■□□□□ 0.28
VPS36-207ENST00000611132 ODF2Q5BJF6 829 aa16.79■□□□□ 0.28
VPS36-207ENST00000611132 BAG1Q99933 345 aaPredicted RBP16.79■□□□□ 0.28
VPS36-207ENST00000611132 FANCCQ00597 558 aa16.79■□□□□ 0.28
VPS36-207ENST00000611132 PPP2R3AQ06190 1150 aa16.79■□□□□ 0.28
VPS36-207ENST00000611132 CHST3Q7LGC8 479 aa16.79■□□□□ 0.28
VPS36-207ENST00000611132 RNF216Q9NWF9 866 aaPredicted RBP16.79■□□□□ 0.28
VPS36-207ENST00000611132 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.79■□□□□ 0.286e-6■□□□□ 9.1
VPS36-207ENST00000611132 PTH1RQ03431 593 aa16.79■□□□□ 0.28
VPS36-207ENST00000611132 TMEM87AQ8NBN3 555 aa16.79■□□□□ 0.28
VPS36-207ENST00000611132 ANKRD13DQ6ZTN6 518 aa16.79■□□□□ 0.28
VPS36-207ENST00000611132 SYTL4Q96C24 671 aaPredicted RBP16.79■□□□□ 0.28
VPS36-207ENST00000611132 TANGO6Q9C0B7 1094 aa16.78■□□□□ 0.28
VPS36-207ENST00000611132 PUF60Q9UHX1 559 aaKnown RBP16.78■□□□□ 0.28
VPS36-207ENST00000611132 TPCN1Q9ULQ1 816 aa16.78■□□□□ 0.28
VPS36-207ENST00000611132 PAFAH1B1P43034 410 aa16.78■□□□□ 0.28
VPS36-207ENST00000611132 TMEM67Q5HYA8 995 aa16.78■□□□□ 0.28
VPS36-207ENST00000611132 CTAGE1Q96RT6 745 aa16.78■□□□□ 0.28
VPS36-207ENST00000611132 SLC26A6Q9BXS9 759 aa16.78■□□□□ 0.28
VPS36-207ENST00000611132 LSG1Q9H089 658 aaKnown RBP16.78■□□□□ 0.28
VPS36-207ENST00000611132 LZTFL1Q9NQ48 299 aa16.78■□□□□ 0.28
VPS36-207ENST00000611132 BABAM1Q9NWV8 329 aa16.78■□□□□ 0.28
VPS36-207ENST00000611132 ABCA8O94911 1581 aa16.78■□□□□ 0.28
VPS36-207ENST00000611132 TUBBP07437 444 aa16.78■□□□□ 0.28
VPS36-207ENST00000611132 PIP4K2BP78356 416 aa16.78■□□□□ 0.28
VPS36-207ENST00000611132 NAA16Q6N069 864 aaPredicted RBP16.78■□□□□ 0.28
VPS36-207ENST00000611132 ELP1O95163 1332 aa16.78■□□□□ 0.28
VPS36-207ENST00000611132 DDIT3P35638 169 aa16.77■□□□□ 0.28
VPS36-207ENST00000611132 GIMAP7Q8NHV1 300 aa16.77■□□□□ 0.28
VPS36-207ENST00000611132 PRC1O43663 620 aa16.77■□□□□ 0.28
VPS36-207ENST00000611132 USO1O60763 962 aaKnown RBP16.77■□□□□ 0.28
VPS36-207ENST00000611132 ERLIN2O94905 339 aa16.77■□□□□ 0.28
VPS36-207ENST00000611132 HDXQ7Z353 690 aa16.77■□□□□ 0.28
VPS36-207ENST00000611132 CACTINQ8WUQ7 758 aaKnown RBP16.77■□□□□ 0.28
VPS36-207ENST00000611132 PHACTR2O75167 634 aa16.77■□□□□ 0.28
VPS36-207ENST00000611132 MPHOSPH8Q99549 860 aa16.77■□□□□ 0.28
VPS36-207ENST00000611132 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.77■□□□□ 0.27
VPS36-207ENST00000611132 ZFYP08048 801 aaPredicted RBP16.76■□□□□ 0.27
VPS36-207ENST00000611132 XPO4Q9C0E2 1151 aaKnown RBP16.76■□□□□ 0.27
VPS36-207ENST00000611132 TRHP20396 242 aaPredicted RBP16.76■□□□□ 0.27
VPS36-207ENST00000611132 MICALCLQ6ZW33 695 aa16.76■□□□□ 0.27
VPS36-207ENST00000611132 GPATCH11Q8N954 259 aa16.76■□□□□ 0.27
VPS36-207ENST00000611132 XAGE3Q8WTP9 111 aa16.76■□□□□ 0.27
VPS36-207ENST00000611132 PAG1Q9NWQ8 432 aa16.76■□□□□ 0.27
VPS36-207ENST00000611132 ZBTB43O43298 467 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms