RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 PLEKHO1Q53GL0 409 aaPredicted RBP19.9■□□□□ 0.78
TNIP1-220ENST00000610535 ZNF771Q7L3S4 317 aaPredicted RBP19.9■□□□□ 0.78
TNIP1-220ENST00000610535 DDX41Q9UJV9 622 aaKnown RBP19.9■□□□□ 0.78
TNIP1-220ENST00000610535 DDX17Q92841 729 aaKnown RBP19.9■□□□□ 0.78
TNIP1-220ENST00000610535 ZSCAN16Q9H4T2 348 aaPredicted RBP19.9■□□□□ 0.78
TNIP1-220ENST00000610535 ZNF215Q9UL58 517 aaPredicted RBP19.9■□□□□ 0.78
TNIP1-220ENST00000610535 KRT32Q14532 448 aa19.89■□□□□ 0.78
TNIP1-220ENST00000610535 SARM1Q6SZW1 724 aa19.89■□□□□ 0.78
TNIP1-220ENST00000610535 UTYO14607 1347 aa19.89■□□□□ 0.77
TNIP1-220ENST00000610535 BECN2A8MW95 431 aa19.89■□□□□ 0.77
TNIP1-220ENST00000610535 CAVIN2O95810 425 aa19.89■□□□□ 0.77
TNIP1-220ENST00000610535 FGD1P98174 961 aa19.89■□□□□ 0.77
TNIP1-220ENST00000610535 PTPN14Q15678 1187 aa19.89■□□□□ 0.77
TNIP1-220ENST00000610535 MRFAP1L1Q96HT8 127 aa19.89■□□□□ 0.77
TNIP1-220ENST00000610535 DBNLQ9UJU6 430 aaKnown RBP19.89■□□□□ 0.77
TNIP1-220ENST00000610535 JCADQ9P266 1359 aa19.89■□□□□ 0.77
TNIP1-220ENST00000610535 CCDC69A6NI79 296 aa19.89■□□□□ 0.77
TNIP1-220ENST00000610535 RBM6P78332 1123 aaKnown RBP19.89■□□□□ 0.77
TNIP1-220ENST00000610535 SNW1Q13573 536 aaKnown RBP19.89■□□□□ 0.77
TNIP1-220ENST00000610535 STX1AQ16623 288 aa19.89■□□□□ 0.77
TNIP1-220ENST00000610535 C1orf141Q5JVX7 400 aa19.89■□□□□ 0.77
TNIP1-220ENST00000610535 RIC3Q7Z5B4 369 aa19.89■□□□□ 0.77
TNIP1-220ENST00000610535 DNAJC2Q99543 621 aaKnown RBP19.89■□□□□ 0.77
TNIP1-220ENST00000610535 USP28Q96RU2 1077 aa19.88■□□□□ 0.77
TNIP1-220ENST00000610535 CCDC9Q9Y3X0 531 aaKnown RBP19.88■□□□□ 0.77
TNIP1-220ENST00000610535 NYAP1Q6ZVC0 841 aa19.88■□□□□ 0.77
TNIP1-220ENST00000610535 DHX40Q8IX18 779 aaKnown RBP19.88■□□□□ 0.77
TNIP1-220ENST00000610535 KIF18AQ8NI77 898 aa19.88■□□□□ 0.77
TNIP1-220ENST00000610535 RCOR1Q9UKL0 485 aa19.88■□□□□ 0.77
TNIP1-220ENST00000610535 STOX1Q6ZVD7 989 aa19.87■□□□□ 0.77
TNIP1-220ENST00000610535 PODXL2Q9NZ53 605 aa19.87■□□□□ 0.77
TNIP1-220ENST00000610535 DDX58O95786 925 aaKnown RBP19.87■□□□□ 0.77
TNIP1-220ENST00000610535 MYL6BP14649 208 aa19.87■□□□□ 0.77
TNIP1-220ENST00000610535 CCT2P78371 535 aaKnown RBP19.87■□□□□ 0.77
TNIP1-220ENST00000610535 CCZ1BP86790 482 aa19.87■□□□□ 0.77
TNIP1-220ENST00000610535 CCZ1P86791 482 aaPredicted RBP19.87■□□□□ 0.77
TNIP1-220ENST00000610535 GUCY1B3Q02153 619 aa19.87■□□□□ 0.77
TNIP1-220ENST00000610535 PDIA6Q15084 440 aa19.87■□□□□ 0.77
TNIP1-220ENST00000610535 SLFNL1Q499Z3 407 aa19.87■□□□□ 0.77
TNIP1-220ENST00000610535 CTDNEP1O95476 244 aa19.86■□□□□ 0.77
TNIP1-220ENST00000610535 TFCP2Q12800 502 aa19.86■□□□□ 0.77
TNIP1-220ENST00000610535 KMT5BQ4FZB7 885 aa19.86■□□□□ 0.77
TNIP1-220ENST00000610535 SMARCC2Q8TAQ2 1214 aa19.86■□□□□ 0.77
TNIP1-220ENST00000610535 DDX21Q9NR30 783 aaKnown RBP eCLIP19.86■□□□□ 0.77
TNIP1-220ENST00000610535 NSUN7Q8NE18 718 aaKnown RBP19.86■□□□□ 0.77
TNIP1-220ENST00000610535 PXDNQ92626 1479 aa19.85■□□□□ 0.77
TNIP1-220ENST00000610535 ATP5JP18859 108 aa19.85■□□□□ 0.77
TNIP1-220ENST00000610535 APOBRQ0VD83 1088 aa19.85■□□□□ 0.77
TNIP1-220ENST00000610535 CCDC73Q6ZRK6 1079 aa19.85■□□□□ 0.77
TNIP1-220ENST00000610535 DDX46Q7L014 1031 aaKnown RBP19.85■□□□□ 0.77
TNIP1-220ENST00000610535 NCOA5Q9HCD5 579 aaKnown RBP19.85■□□□□ 0.77
TNIP1-220ENST00000610535 MORC2Q9Y6X9 1032 aaPredicted RBP19.85■□□□□ 0.77
TNIP1-220ENST00000610535 ZNF609O15014 1411 aa19.85■□□□□ 0.77
TNIP1-220ENST00000610535 HEG1Q9ULI3 1381 aa19.85■□□□□ 0.77
TNIP1-220ENST00000610535 AOPEPQ8N6M6 819 aa19.85■□□□□ 0.77
TNIP1-220ENST00000610535 U3KPZ7 1027 aaPredicted RBP19.85■□□□□ 0.77
TNIP1-220ENST00000610535 NEURL1BA8MQ27 555 aa19.84■□□□□ 0.77
TNIP1-220ENST00000610535 NPHP1O15259 732 aa19.84■□□□□ 0.77
TNIP1-220ENST00000610535 CTAGE5O15320 804 aa19.84■□□□□ 0.77
TNIP1-220ENST00000610535 NEMFO60524 1076 aa19.84■□□□□ 0.77
TNIP1-220ENST00000610535 KINO60870 393 aaKnown RBP19.84■□□□□ 0.77
TNIP1-220ENST00000610535 ENGASEQ8NFI3 743 aa19.84■□□□□ 0.77
TNIP1-220ENST00000610535 NAP1L2Q9ULW6 460 aaPredicted RBP19.84■□□□□ 0.77
TNIP1-220ENST00000610535 LTN1O94822 1766 aa19.84■□□□□ 0.77
TNIP1-220ENST00000610535 PTPDC1A2A3K4 754 aa19.84■□□□□ 0.77
TNIP1-220ENST00000610535 ME1P48163 572 aa19.84■□□□□ 0.77
TNIP1-220ENST00000610535 SLC39A6Q13433 755 aa19.84■□□□□ 0.77
TNIP1-220ENST00000610535 GCKRQ14397 625 aa19.84■□□□□ 0.77
TNIP1-220ENST00000610535 TNNI3KQ59H18 835 aa19.84■□□□□ 0.77
TNIP1-220ENST00000610535 CCAR2Q8N163 923 aaKnown RBP19.84■□□□□ 0.77
TNIP1-220ENST00000610535 SYTL4Q96C24 671 aaPredicted RBP19.84■□□□□ 0.77
TNIP1-220ENST00000610535 FPGT-TNNI3KV9GXZ4 949 aa19.84■□□□□ 0.77
TNIP1-220ENST00000610535 A0A0G2JLW4 131 aa19.83■□□□□ 0.77
TNIP1-220ENST00000610535 PFKFB2O60825 505 aa19.83■□□□□ 0.77
TNIP1-220ENST00000610535 MCMDC2Q4G0Z9 681 aa19.83■□□□□ 0.77
TNIP1-220ENST00000610535 FSIP1Q8NA03 581 aa19.83■□□□□ 0.77
TNIP1-220ENST00000610535 MYD88Q99836 296 aa19.83■□□□□ 0.77
TNIP1-220ENST00000610535 DBNDD2Q9BQY9 259 aa19.83■□□□□ 0.77
TNIP1-220ENST00000610535 RGPD2P0DJD1 1756 aa19.83■□□□□ 0.77
TNIP1-220ENST00000610535 ELF2Q15723 593 aa19.83■□□□□ 0.76
TNIP1-220ENST00000610535 ANO10Q9NW15 660 aa19.83■□□□□ 0.76
TNIP1-220ENST00000610535 ANKARQ7Z5J8 1434 aa19.83■□□□□ 0.76
TNIP1-220ENST00000610535 SLFN14P0C7P3 912 aa19.82■□□□□ 0.76
TNIP1-220ENST00000610535 AMOTQ4VCS5 1084 aa19.82■□□□□ 0.76
TNIP1-220ENST00000610535 FAM160A1Q05DH4 1040 aa19.82■□□□□ 0.76
TNIP1-220ENST00000610535 NAA16Q6N069 864 aaPredicted RBP19.82■□□□□ 0.76
TNIP1-220ENST00000610535 PIP4K2AP48426 406 aaPredicted RBP19.82■□□□□ 0.76
TNIP1-220ENST00000610535 PTPN12Q05209 780 aaKnown RBP19.82■□□□□ 0.76
TNIP1-220ENST00000610535 NEXNQ0ZGT2 675 aa19.82■□□□□ 0.76
TNIP1-220ENST00000610535 FBXO38Q6PIJ6 1188 aa19.82■□□□□ 0.76
TNIP1-220ENST00000610535 CHST3Q7LGC8 479 aa19.82■□□□□ 0.76
TNIP1-220ENST00000610535 ZNF397Q8NF99 534 aaPredicted RBP19.82■□□□□ 0.76
TNIP1-220ENST00000610535 XAGE3Q8WTP9 111 aa19.82■□□□□ 0.76
TNIP1-220ENST00000610535 ZC3H6P61129 1189 aaKnown RBP19.81■□□□□ 0.76
TNIP1-220ENST00000610535 COPS6Q7L5N1 327 aa19.81■□□□□ 0.76
TNIP1-220ENST00000610535 DHX32Q7L7V1 743 aaKnown RBP19.81■□□□□ 0.76
TNIP1-220ENST00000610535 ILDR1Q86SU0 546 aaPredicted RBP19.81■□□□□ 0.76
TNIP1-220ENST00000610535 NBPF11Q86T75 865 aa19.81■□□□□ 0.76
TNIP1-220ENST00000610535 PROSER2Q86WR7 435 aaPredicted RBP19.81■□□□□ 0.76
TNIP1-220ENST00000610535 LLPHQ9BRT6 129 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms