RNA–Protein interactions for RNA: ENST00000606557.1

SNX5-217, Transcript of sorting nexin 5, humanhuman

BASIC

Gene SNX5, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-217ENST00000606557 PODXL2Q9NZ53 605 aa28.88■■■□□ 2.21
SNX5-217ENST00000606557 MINPP1Q9UNW1 487 aa28.88■■■□□ 2.21
SNX5-217ENST00000606557 SUPT20HQ8NEM7 779 aa28.87■■■□□ 2.21
SNX5-217ENST00000606557 ZBTB7BO15156 539 aaPredicted RBP28.86■■■□□ 2.21
SNX5-217ENST00000606557 TAF7LQ5H9L4 462 aa28.86■■■□□ 2.21
SNX5-217ENST00000606557 XDHP47989 1333 aa28.86■■■□□ 2.21
SNX5-217ENST00000606557 ZC3H4Q9UPT8 1303 aaKnown RBP28.86■■■□□ 2.21
SNX5-217ENST00000606557 GNAI2P04899 355 aa28.85■■■□□ 2.21
SNX5-217ENST00000606557 PDE3AQ14432 1141 aa28.85■■■□□ 2.21
SNX5-217ENST00000606557 MVPQ14764 893 aaKnown RBP28.85■■■□□ 2.21
SNX5-217ENST00000606557 C20orf194Q5TEA3 1177 aa28.85■■■□□ 2.21
SNX5-217ENST00000606557 ANKIB1Q9P2G1 1089 aa28.85■■■□□ 2.21
SNX5-217ENST00000606557 POLLQ9UGP5 575 aa28.85■■■□□ 2.21
SNX5-217ENST00000606557 RFX5P48382 616 aaPredicted RBP28.83■■■□□ 2.21
SNX5-217ENST00000606557 TBC1D16Q8TBP0 767 aa28.83■■■□□ 2.21
SNX5-217ENST00000606557 VPS33BQ9H267 617 aa28.83■■■□□ 2.21
SNX5-217ENST00000606557 COG6Q9Y2V7 657 aa28.83■■■□□ 2.21
SNX5-217ENST00000606557 RRP1P56182 461 aaKnown RBP28.82■■■□□ 2.2
SNX5-217ENST00000606557 AOC3Q16853 763 aa28.82■■■□□ 2.2
SNX5-217ENST00000606557 LDHAL6AQ6ZMR3 332 aa28.82■■■□□ 2.2
SNX5-217ENST00000606557 GGA1Q9UJY5 639 aa28.82■■■□□ 2.2
SNX5-217ENST00000606557 C6orf229H3BNL8 230 aa28.81■■■□□ 2.2
SNX5-217ENST00000606557 PPIP5K2O43314 1243 aa28.81■■■□□ 2.2
SNX5-217ENST00000606557 UFL1O94874 794 aa28.81■■■□□ 2.2
SNX5-217ENST00000606557 CHRNDQ07001 517 aa28.81■■■□□ 2.2
SNX5-217ENST00000606557 KIAA2012Q0VF49 1180 aa28.81■■■□□ 2.2
SNX5-217ENST00000606557 MTX1Q13505 466 aa28.81■■■□□ 2.2
SNX5-217ENST00000606557 LARGE2Q8N3Y3 721 aa28.81■■■□□ 2.2
SNX5-217ENST00000606557 CNNM1Q9NRU3 951 aa28.81■■■□□ 2.2
SNX5-217ENST00000606557 KLHDC4Q8TBB5 520 aa28.8■■■□□ 2.2
SNX5-217ENST00000606557 PUS3Q9BZE2 481 aaKnown RBP28.8■■■□□ 2.2
SNX5-217ENST00000606557 ANKRD2Q9GZV1 360 aa28.8■■■□□ 2.2
SNX5-217ENST00000606557 DDX19BQ9UMR2 479 aa28.8■■■□□ 2.2
SNX5-217ENST00000606557 GPR101Q96P66 508 aaPredicted RBP28.79■■■□□ 2.2
SNX5-217ENST00000606557 ATP2B4P23634 1241 aa28.78■■■□□ 2.2
SNX5-217ENST00000606557 PTPN12Q05209 780 aaKnown RBP28.78■■■□□ 2.2
SNX5-217ENST00000606557 WASHC4Q2M389 1173 aa28.78■■■□□ 2.2
SNX5-217ENST00000606557 JDP2Q8WYK2 163 aa28.78■■■□□ 2.2
SNX5-217ENST00000606557 EYA3Q99504 573 aa28.78■■■□□ 2.2
SNX5-217ENST00000606557 C1orf115Q9H7X2 142 aa28.78■■■□□ 2.2
SNX5-217ENST00000606557 RIPOR2Q9Y4F9 1068 aa28.77■■■□□ 2.2
SNX5-217ENST00000606557 PSME4Q14997 1843 aa28.76■■■□□ 2.19
SNX5-217ENST00000606557 WTIPA6NIX2 430 aaPredicted RBP28.76■■■□□ 2.19
SNX5-217ENST00000606557 SRGAP3O43295 1099 aa28.76■■■□□ 2.19
SNX5-217ENST00000606557 LRRC24Q50LG9 513 aa28.76■■■□□ 2.19
SNX5-217ENST00000606557 LEMD3Q9Y2U8 911 aa28.76■■■□□ 2.19
SNX5-217ENST00000606557 FZD9O00144 591 aa28.75■■■□□ 2.19
SNX5-217ENST00000606557 NIM1KQ8IY84 436 aa28.75■■■□□ 2.19
SNX5-217ENST00000606557 ZNF784Q8NCA9 323 aaPredicted RBP28.75■■■□□ 2.19
SNX5-217ENST00000606557 HELBQ8NG08 1087 aaPredicted RBP28.75■■■□□ 2.19
SNX5-217ENST00000606557 SCN9AQ15858 1988 aa28.75■■■□□ 2.19
SNX5-217ENST00000606557 MED23Q9ULK4 1368 aa28.75■■■□□ 2.19
SNX5-217ENST00000606557 RIMBP2O15034 1052 aa28.74■■■□□ 2.19
SNX5-217ENST00000606557 TAF5LO75529 589 aa28.74■■■□□ 2.19
SNX5-217ENST00000606557 ZNF804BA4D1E1 1349 aa28.73■■■□□ 2.19
SNX5-217ENST00000606557 MROH5Q6ZUA9 1318 aa28.73■■■□□ 2.19
SNX5-217ENST00000606557 ZNF541Q9H0D2 1346 aa28.73■■■□□ 2.19
SNX5-217ENST00000606557 PNMA6EA0A0J9YXQ4 647 aa28.73■■■□□ 2.19
SNX5-217ENST00000606557 EYA2O00167 538 aa28.73■■■□□ 2.19
SNX5-217ENST00000606557 WDR90Q96KV7 1748 aa28.73■■■□□ 2.19
SNX5-217ENST00000606557 COPRSQ9NQ92 184 aa28.73■■■□□ 2.19
SNX5-217ENST00000606557 ZBTB40Q9NUA8 1239 aa28.73■■■□□ 2.19
SNX5-217ENST00000606557 ZC3H12CQ9C0D7 883 aaKnown RBP28.72■■■□□ 2.19
SNX5-217ENST00000606557 FBXO3Q9UK99 471 aa28.72■■■□□ 2.19
SNX5-217ENST00000606557 PA2G4Q9UQ80 394 aaKnown RBP28.72■■■□□ 2.19
SNX5-217ENST00000606557 GLTPD2A6NH11 291 aa28.71■■■□□ 2.19
SNX5-217ENST00000606557 ATG9AQ7Z3C6 839 aa28.71■■■□□ 2.19
SNX5-217ENST00000606557 ZNF526Q8TF50 670 aaPredicted RBP28.71■■■□□ 2.19
SNX5-217ENST00000606557 SIL1Q9H173 461 aa28.71■■■□□ 2.19
SNX5-217ENST00000606557 CHMP4BQ9H444 224 aaKnown RBP28.71■■■□□ 2.19
SNX5-217ENST00000606557 ZNF646O15015 1829 aaPredicted RBP28.71■■■□□ 2.19
SNX5-217ENST00000606557 SNAP23O00161 211 aa28.7■■■□□ 2.18
SNX5-217ENST00000606557 CIAO1O76071 339 aa28.7■■■□□ 2.18
SNX5-217ENST00000606557 KCNJ4P48050 445 aa28.7■■■□□ 2.18
SNX5-217ENST00000606557 ATP8B2P98198 1209 aa28.7■■■□□ 2.18
SNX5-217ENST00000606557 VGLL2Q8N8G2 317 aa28.7■■■□□ 2.18
SNX5-217ENST00000606557 ZNRF3Q9ULT6 936 aa28.7■■■□□ 2.18
SNX5-217ENST00000606557 IRS2Q9Y4H2 1338 aa28.69■■■□□ 2.18
SNX5-217ENST00000606557 KLRK1P26718 216 aa28.69■■■□□ 2.18
SNX5-217ENST00000606557 POLA2Q14181 598 aa28.69■■■□□ 2.18
SNX5-217ENST00000606557 METTL24Q5JXM2 366 aa28.69■■■□□ 2.18
SNX5-217ENST00000606557 DPY19L2Q6NUT2 758 aa28.69■■■□□ 2.18
SNX5-217ENST00000606557 DBNDD1Q9H9R9 158 aa28.69■■■□□ 2.18
SNX5-217ENST00000606557 KDM2BQ8NHM5 1336 aa28.69■■■□□ 2.18
SNX5-217ENST00000606557 YDJCA8MPS7 323 aa28.68■■■□□ 2.18
SNX5-217ENST00000606557 EIF6P56537 245 aaKnown RBP28.68■■■□□ 2.18
SNX5-217ENST00000606557 DOK7Q18PE1 504 aa28.68■■■□□ 2.18
SNX5-217ENST00000606557 CEP85Q6P2H3 762 aa28.68■■■□□ 2.18
SNX5-217ENST00000606557 SSH3Q8TE77 659 aa28.68■■■□□ 2.18
SNX5-217ENST00000606557 SCN4AP35499 1836 aa28.67■■■□□ 2.18
SNX5-217ENST00000606557 ECE2O60344 883 aa28.67■■■□□ 2.18
SNX5-217ENST00000606557 TXNRD3Q86VQ6 643 aa28.67■■■□□ 2.18
SNX5-217ENST00000606557 ARAP2Q8WZ64 1704 aa28.66■■■□□ 2.18
SNX5-217ENST00000606557 UBE4AQ14139 1066 aa28.66■■■□□ 2.18
SNX5-217ENST00000606557 C15orf52Q6ZUT6 534 aaKnown RBP28.66■■■□□ 2.18
SNX5-217ENST00000606557 GPBP1L1Q9HC44 474 aaPredicted RBP28.66■■■□□ 2.18
SNX5-217ENST00000606557 DDNO94850 711 aaPredicted RBP28.65■■■□□ 2.18
SNX5-217ENST00000606557 PDE8BO95263 885 aa28.65■■■□□ 2.18
SNX5-217ENST00000606557 IL15P40933 162 aaPredicted RBP28.65■■■□□ 2.18
SNX5-217ENST00000606557 CXCL9Q07325 125 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms