RNA–Protein interactions for RNA: ENST00000602272.5

FARP1-241, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-241ENST00000602272 MAP2K3P46734 347 aa9.76□□□□□ -0.85
FARP1-241ENST00000602272 CCER1Q8TC90 406 aaPredicted RBP9.76□□□□□ -0.85
FARP1-241ENST00000602272 RAB6BQ9NRW1 208 aa9.76□□□□□ -0.85
FARP1-241ENST00000602272 NOD1Q9Y239 953 aa9.76□□□□□ -0.85
FARP1-241ENST00000602272 LRPPRCP42704 1394 aaKnown RBP9.75□□□□□ -0.85
FARP1-241ENST00000602272 NCOA3Q9Y6Q9 1424 aa9.75□□□□□ -0.85
FARP1-241ENST00000602272 TMEM214Q6NUQ4 689 aaKnown RBP9.75□□□□□ -0.85
FARP1-241ENST00000602272 PBXIP1Q96AQ6 731 aa9.75□□□□□ -0.85
FARP1-241ENST00000602272 VRTNQ9H8Y1 702 aa9.75□□□□□ -0.85
FARP1-241ENST00000602272 DLC1Q96QB1 1528 aa9.75□□□□□ -0.85
FARP1-241ENST00000602272 ARHGEF28Q8N1W1 1705 aaKnown RBP9.74□□□□□ -0.85
FARP1-241ENST00000602272 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.74□□□□□ -0.85
FARP1-241ENST00000602272 CDCA8Q53HL2 280 aa9.74□□□□□ -0.85
FARP1-241ENST00000602272 TMEM132EQ6IEE7 984 aa9.74□□□□□ -0.85
FARP1-241ENST00000602272 GPAT2Q6NUI2 795 aa9.74□□□□□ -0.85
FARP1-241ENST00000602272 ACDQ96AP0 544 aa9.74□□□□□ -0.85
FARP1-241ENST00000602272 PCDHGA11Q9Y5H2 935 aa9.74□□□□□ -0.85
FARP1-241ENST00000602272 HRH3Q9Y5N1 445 aa9.74□□□□□ -0.85
FARP1-241ENST00000602272 ABCC11Q96J66 1382 aa9.74□□□□□ -0.85
FARP1-241ENST00000602272 ROBO2Q9HCK4 1378 aa9.74□□□□□ -0.85
FARP1-241ENST00000602272 CSB-PGBD3P0DP91 1061 aa9.73□□□□□ -0.85
FARP1-241ENST00000602272 CLDN10P78369 228 aa9.73□□□□□ -0.85
FARP1-241ENST00000602272 TRIM50Q86XT4 487 aa9.73□□□□□ -0.85
FARP1-241ENST00000602272 PGBD3Q8N328 593 aa9.73□□□□□ -0.85
FARP1-241ENST00000602272 ADGRL3Q9HAR2 1447 aa9.73□□□□□ -0.85
FARP1-241ENST00000602272 GTF2IP78347 998 aa9.72□□□□□ -0.85
FARP1-241ENST00000602272 KIAA1024Q9UPX6 916 aa9.72□□□□□ -0.85
FARP1-241ENST00000602272 MSH6P52701 1360 aa9.72□□□□□ -0.85
FARP1-241ENST00000602272 FAM135BQ49AJ0 1406 aa9.72□□□□□ -0.85
FARP1-241ENST00000602272 RALGAPBQ86X10 1494 aa9.72□□□□□ -0.85
FARP1-241ENST00000602272 LOC100996750A0A140TA64 210 aa9.71□□□□□ -0.86
FARP1-241ENST00000602272 ZBTB7BO15156 539 aaPredicted RBP9.71□□□□□ -0.86
FARP1-241ENST00000602272 CRTC2Q53ET0 693 aaPredicted RBP9.71□□□□□ -0.86
FARP1-241ENST00000602272 OGFOD1Q8N543 542 aa9.71□□□□□ -0.86
FARP1-241ENST00000602272 OXCT2Q9BYC2 517 aaPredicted RBP9.71□□□□□ -0.86
FARP1-241ENST00000602272 KRTAP4-6Q9BYQ5 205 aa9.71□□□□□ -0.86
FARP1-241ENST00000602272 FHDC1Q9C0D6 1143 aaPredicted RBP9.71□□□□□ -0.86
FARP1-241ENST00000602272 STK26Q9P289 416 aa9.71□□□□□ -0.86
FARP1-241ENST00000602272 DCCP43146 1447 aa9.71□□□□□ -0.86
FARP1-241ENST00000602272 CDC42BPGQ6DT37 1551 aa9.71□□□□□ -0.86
FARP1-241ENST00000602272 OIP5O43482 229 aa9.7□□□□□ -0.86
FARP1-241ENST00000602272 RASA1P20936 1047 aa9.7□□□□□ -0.86
FARP1-241ENST00000602272 PHKA2P46019 1235 aa9.7□□□□□ -0.86
FARP1-241ENST00000602272 NBPF8Q3BBV2 869 aa9.7□□□□□ -0.86
FARP1-241ENST00000602272 EFHC2Q5JST6 749 aa9.7□□□□□ -0.86
FARP1-241ENST00000602272 FBXO41Q8TF61 875 aa9.7□□□□□ -0.86
FARP1-241ENST00000602272 GPAMQ9HCL2 828 aa9.7□□□□□ -0.86
FARP1-241ENST00000602272 DNAAF2Q9NVR5 837 aaKnown RBP9.7□□□□□ -0.86
FARP1-241ENST00000602272 PLEKHH1Q9ULM0 1364 aa9.7□□□□□ -0.86
FARP1-241ENST00000602272 ADGRB2O60241 1585 aa9.7□□□□□ -0.86
FARP1-241ENST00000602272 FAM196BA6NMK8 535 aa9.69□□□□□ -0.86
FARP1-241ENST00000602272 USP17L15C9J2P7 530 aa9.69□□□□□ -0.86
FARP1-241ENST00000602272 USP17L10C9JJH3 530 aa9.69□□□□□ -0.86
FARP1-241ENST00000602272 USP17L13C9JLJ4 530 aa9.69□□□□□ -0.86
FARP1-241ENST00000602272 USP17L12C9JPN9 530 aa9.69□□□□□ -0.86
FARP1-241ENST00000602272 USP17L11C9JVI0 530 aa9.69□□□□□ -0.86
FARP1-241ENST00000602272 USP17L21D6R901 530 aa9.69□□□□□ -0.86
FARP1-241ENST00000602272 USP17L18D6R9N7 530 aa9.69□□□□□ -0.86
FARP1-241ENST00000602272 USP17L22D6RA61 530 aa9.69□□□□□ -0.86
FARP1-241ENST00000602272 USP17L17D6RBQ6 530 aa9.69□□□□□ -0.86
FARP1-241ENST00000602272 USP17L19D6RCP7 530 aa9.69□□□□□ -0.86
FARP1-241ENST00000602272 USP17L20D6RJB6 530 aa9.69□□□□□ -0.86
FARP1-241ENST00000602272 UBAP1LF5GYI3 381 aa9.69□□□□□ -0.86
FARP1-241ENST00000602272 DKK1O94907 266 aa9.69□□□□□ -0.86
FARP1-241ENST00000602272 ATP1A2P50993 1020 aa9.69□□□□□ -0.86
FARP1-241ENST00000602272 USP17L24Q0WX57 530 aa9.69□□□□□ -0.86
FARP1-241ENST00000602272 PTK7Q13308 1070 aa9.69□□□□□ -0.86
FARP1-241ENST00000602272 NBPF1Q3BBV0 1214 aa9.69□□□□□ -0.86
FARP1-241ENST00000602272 GPRASP1Q5JY77 1395 aa9.69□□□□□ -0.86
FARP1-241ENST00000602272 RHBDD1Q8TEB9 315 aa9.69□□□□□ -0.86
FARP1-241ENST00000602272 CNTNAP5Q8WYK1 1306 aa9.69□□□□□ -0.86
FARP1-241ENST00000602272 GDF2Q9UK05 429 aaPredicted RBP9.69□□□□□ -0.86
FARP1-241ENST00000602272 ROCK2O75116 1388 aaKnown RBP9.68□□□□□ -0.86
FARP1-241ENST00000602272 TOM1O60784 492 aa9.68□□□□□ -0.86
FARP1-241ENST00000602272 ATG7O95352 703 aa9.68□□□□□ -0.86
FARP1-241ENST00000602272 STAU1O95793 577 aaKnown RBP9.68□□□□□ -0.86
FARP1-241ENST00000602272 C4orf17Q53FE4 359 aa9.68□□□□□ -0.86
FARP1-241ENST00000602272 LARP1Q6PKG0 1096 aaKnown RBP9.68□□□□□ -0.86
FARP1-241ENST00000602272 WAPLQ7Z5K2 1190 aa9.68□□□□□ -0.86
FARP1-241ENST00000602272 LARGE2Q8N3Y3 721 aa9.68□□□□□ -0.86
FARP1-241ENST00000602272 ZNF594Q96JF6 807 aaPredicted RBP9.68□□□□□ -0.86
FARP1-241ENST00000602272 C19orf44Q9H6X5 657 aa9.68□□□□□ -0.86
FARP1-241ENST00000602272 TRAK1Q9UPV9 953 aa9.68□□□□□ -0.86
FARP1-241ENST00000602272 FMN2Q9NZ56 1722 aa9.68□□□□□ -0.86
FARP1-241ENST00000602272 QRICH2Q9H0J4 1663 aa9.67□□□□□ -0.86
FARP1-241ENST00000602272 ROBO1Q9Y6N7 1651 aa9.67□□□□□ -0.86
FARP1-241ENST00000602272 SCNN1DP51172 638 aa9.67□□□□□ -0.86
FARP1-241ENST00000602272 SIX5Q8N196 739 aa9.67□□□□□ -0.86
FARP1-241ENST00000602272 PRAM1Q96QH2 718 aa9.67□□□□□ -0.86
FARP1-241ENST00000602272 ATXN7L1Q9ULK2 861 aaPredicted RBP9.67□□□□□ -0.86
FARP1-241ENST00000602272 MST1RQ04912 1400 aa9.66□□□□□ -0.86
FARP1-241ENST00000602272 MSX1P28360 303 aa9.66□□□□□ -0.86
FARP1-241ENST00000602272 PSME1Q06323 249 aa9.66□□□□□ -0.86
FARP1-241ENST00000602272 TLR1Q15399 786 aa9.66□□□□□ -0.86
FARP1-241ENST00000602272 TPCN2Q8NHX9 752 aa9.66□□□□□ -0.86
FARP1-241ENST00000602272 DCAF5Q96JK2 942 aa9.66□□□□□ -0.86
FARP1-241ENST00000602272 ARXQ96QS3 562 aa9.66□□□□□ -0.86
FARP1-241ENST00000602272 ETNK1Q9HBU6 452 aa9.66□□□□□ -0.86
FARP1-241ENST00000602272 ZMIZ1Q9ULJ6 1067 aa9.66□□□□□ -0.86
FARP1-241ENST00000602272 TMEM229AB2RXF0 380 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms