RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 PPIP5K2O43314 1243 aa17.28■□□□□ 0.36
SNRPA-208ENST00000600456 GNAI2P04899 355 aa17.28■□□□□ 0.36
SNRPA-208ENST00000600456 KIAA2012Q0VF49 1180 aa17.28■□□□□ 0.36
SNRPA-208ENST00000600456 PDE3AQ14432 1141 aa17.28■□□□□ 0.36
SNRPA-208ENST00000600456 LARGE2Q8N3Y3 721 aa17.28■□□□□ 0.36
SNRPA-208ENST00000600456 TBC1D16Q8TBP0 767 aa17.28■□□□□ 0.36
SNRPA-208ENST00000600456 JDP2Q8WYK2 163 aa17.28■□□□□ 0.36
SNRPA-208ENST00000600456 EYA3Q99504 573 aa17.28■□□□□ 0.36
SNRPA-208ENST00000600456 GGA1Q9UJY5 639 aa17.28■□□□□ 0.36
SNRPA-208ENST00000600456 C6orf229H3BNL8 230 aa17.27■□□□□ 0.36
SNRPA-208ENST00000600456 ATP2B4P23634 1241 aa17.27■□□□□ 0.36
SNRPA-208ENST00000600456 LDHAL6AQ6ZMR3 332 aa17.27■□□□□ 0.36
SNRPA-208ENST00000600456 PANK1Q8TE04 598 aa17.27■□□□□ 0.36
SNRPA-208ENST00000600456 POLLQ9UGP5 575 aa17.27■□□□□ 0.36
SNRPA-208ENST00000600456 ZBTB7BO15156 539 aaPredicted RBP17.26■□□□□ 0.35
SNRPA-208ENST00000600456 PLIN1O60240 522 aa17.26■□□□□ 0.35
SNRPA-208ENST00000600456 UFL1O94874 794 aa17.26■□□□□ 0.35
SNRPA-208ENST00000600456 MTX1Q13505 466 aa17.26■□□□□ 0.35
SNRPA-208ENST00000600456 MVPQ14764 893 aaKnown RBP17.26■□□□□ 0.35
SNRPA-208ENST00000600456 AOC3Q16853 763 aa17.26■□□□□ 0.35
SNRPA-208ENST00000600456 WASHC4Q2M389 1173 aa17.26■□□□□ 0.35
SNRPA-208ENST00000600456 NIM1KQ8IY84 436 aa17.26■□□□□ 0.35
SNRPA-208ENST00000600456 ZNF784Q8NCA9 323 aaPredicted RBP17.26■□□□□ 0.35
SNRPA-208ENST00000600456 ZNF594Q96JF6 807 aaPredicted RBP17.26■□□□□ 0.35
SNRPA-208ENST00000600456 CNNM1Q9NRU3 951 aa17.26■□□□□ 0.35
SNRPA-208ENST00000600456 LEMD3Q9Y2U8 911 aa17.26■□□□□ 0.35
SNRPA-208ENST00000600456 TIAM2Q8IVF5 1701 aa17.26■□□□□ 0.35
SNRPA-208ENST00000600456 DICER1Q9UPY3 1922 aaKnown RBP17.25■□□□□ 0.35
SNRPA-208ENST00000600456 KDM2BQ8NHM5 1336 aa17.25■□□□□ 0.35
SNRPA-208ENST00000600456 FZD9O00144 591 aa17.25■□□□□ 0.35
SNRPA-208ENST00000600456 CHRNDQ07001 517 aa17.25■□□□□ 0.35
SNRPA-208ENST00000600456 ZC3H12CQ9C0D7 883 aaKnown RBP17.25■□□□□ 0.35
SNRPA-208ENST00000600456 CHMP4BQ9H444 224 aaKnown RBP17.25■□□□□ 0.35
SNRPA-208ENST00000600456 DDX19BQ9UMR2 479 aa17.25■□□□□ 0.35
SNRPA-208ENST00000600456 GLTPD2A6NH11 291 aa17.24■□□□□ 0.35
SNRPA-208ENST00000600456 RFX5P48382 616 aaPredicted RBP17.24■□□□□ 0.35
SNRPA-208ENST00000600456 DPY19L2Q6NUT2 758 aa17.24■□□□□ 0.35
SNRPA-208ENST00000600456 FBXO3Q9UK99 471 aa17.24■□□□□ 0.35
SNRPA-208ENST00000600456 MROH5Q6ZUA9 1318 aa17.23■□□□□ 0.35
SNRPA-208ENST00000600456 CCDC88AQ3V6T2 1871 aa17.23■□□□□ 0.35
SNRPA-208ENST00000600456 ZNRF3Q9ULT6 936 aa17.23■□□□□ 0.35
SNRPA-208ENST00000600456 MED23Q9ULK4 1368 aa17.23■□□□□ 0.35
SNRPA-208ENST00000600456 SPEF2Q9C093 1822 aa17.23■□□□□ 0.35
SNRPA-208ENST00000600456 ZNF804BA4D1E1 1349 aa17.22■□□□□ 0.35
SNRPA-208ENST00000600456 SRGAP3O43295 1099 aa17.22■□□□□ 0.35
SNRPA-208ENST00000600456 KCNJ4P48050 445 aa17.22■□□□□ 0.35
SNRPA-208ENST00000600456 EIF6P56537 245 aaKnown RBP17.22■□□□□ 0.35
SNRPA-208ENST00000600456 PTPN12Q05209 780 aaKnown RBP17.22■□□□□ 0.35
SNRPA-208ENST00000600456 GPBP1L1Q9HC44 474 aaPredicted RBP17.22■□□□□ 0.35
SNRPA-208ENST00000600456 COG6Q9Y2V7 657 aa17.22■□□□□ 0.35
SNRPA-208ENST00000600456 RIPOR2Q9Y4F9 1068 aa17.22■□□□□ 0.35
SNRPA-208ENST00000600456 COL4A5P29400 1685 aa17.22■□□□□ 0.35
SNRPA-208ENST00000600456 EYA2O00167 538 aa17.21■□□□□ 0.35
SNRPA-208ENST00000600456 RIMBP2O15034 1052 aa17.21■□□□□ 0.35
SNRPA-208ENST00000600456 CIAO1O76071 339 aa17.21■□□□□ 0.35
SNRPA-208ENST00000600456 RRP1P56182 461 aaKnown RBP17.21■□□□□ 0.35
SNRPA-208ENST00000600456 PUS3Q9BZE2 481 aaKnown RBP17.21■□□□□ 0.35
SNRPA-208ENST00000600456 COPRSQ9NQ92 184 aa17.21■□□□□ 0.35
SNRPA-208ENST00000600456 C20orf194Q5TEA3 1177 aa17.2■□□□□ 0.34
SNRPA-208ENST00000600456 C15orf52Q6ZUT6 534 aaKnown RBP17.2■□□□□ 0.34
SNRPA-208ENST00000600456 GPC2Q8N158 579 aa17.2■□□□□ 0.34
SNRPA-208ENST00000600456 KLHDC4Q8TBB5 520 aa17.2■□□□□ 0.34
SNRPA-208ENST00000600456 ZNF526Q8TF50 670 aaPredicted RBP17.2■□□□□ 0.34
SNRPA-208ENST00000600456 ZNF541Q9H0D2 1346 aa17.2■□□□□ 0.34
SNRPA-208ENST00000600456 TAF5LO75529 589 aa17.19■□□□□ 0.34
SNRPA-208ENST00000600456 LRRC24Q50LG9 513 aa17.19■□□□□ 0.34
SNRPA-208ENST00000600456 METTL24Q5JXM2 366 aa17.19■□□□□ 0.34
SNRPA-208ENST00000600456 HELBQ8NG08 1087 aaPredicted RBP17.19■□□□□ 0.34
SNRPA-208ENST00000600456 GPR101Q96P66 508 aaPredicted RBP17.19■□□□□ 0.34
SNRPA-208ENST00000600456 ZBTB40Q9NUA8 1239 aa17.19■□□□□ 0.34
SNRPA-208ENST00000600456 G3V3G9 751 aa17.18■□□□□ 0.34
SNRPA-208ENST00000600456 ECE2O60344 883 aa17.18■□□□□ 0.34
SNRPA-208ENST00000600456 PDE8BO95263 885 aa17.18■□□□□ 0.34
SNRPA-208ENST00000600456 IL15P40933 162 aaPredicted RBP17.18■□□□□ 0.34
SNRPA-208ENST00000600456 ATP8B2P98198 1209 aa17.18■□□□□ 0.34
SNRPA-208ENST00000600456 UBE4AQ14139 1066 aa17.18■□□□□ 0.34
SNRPA-208ENST00000600456 DCAF8Q5TAQ9 597 aa17.18■□□□□ 0.34
SNRPA-208ENST00000600456 L3MBTL3Q96JM7 780 aaPredicted RBP17.18■□□□□ 0.34
SNRPA-208ENST00000600456 PNMA6EA0A0J9YXQ4 647 aa17.17■□□□□ 0.34
SNRPA-208ENST00000600456 WTIPA6NIX2 430 aaPredicted RBP17.17■□□□□ 0.34
SNRPA-208ENST00000600456 DDNO94850 711 aaPredicted RBP17.17■□□□□ 0.34
SNRPA-208ENST00000600456 CXCL9Q07325 125 aa17.17■□□□□ 0.34
SNRPA-208ENST00000600456 POLA2Q14181 598 aa17.17■□□□□ 0.34
SNRPA-208ENST00000600456 TNIP1Q15025 636 aa17.17■□□□□ 0.34
SNRPA-208ENST00000600456 DOK7Q18PE1 504 aa17.17■□□□□ 0.34
SNRPA-208ENST00000600456 CIAPIN1Q6FI81 312 aa17.17■□□□□ 0.34
SNRPA-208ENST00000600456 ATG9AQ7Z3C6 839 aa17.17■□□□□ 0.34
SNRPA-208ENST00000600456 PODNQ7Z5L7 613 aa17.17■□□□□ 0.34
SNRPA-208ENST00000600456 VGLL2Q8N8G2 317 aa17.17■□□□□ 0.34
SNRPA-208ENST00000600456 SSH3Q8TE77 659 aa17.17■□□□□ 0.34
SNRPA-208ENST00000600456 COA1Q9GZY4 146 aa17.17■□□□□ 0.34
SNRPA-208ENST00000600456 C1orf115Q9H7X2 142 aa17.17■□□□□ 0.34
SNRPA-208ENST00000600456 DBNDD1Q9H9R9 158 aa17.17■□□□□ 0.34
SNRPA-208ENST00000600456 A0A1B0GUL6 1792 aa17.16■□□□□ 0.34
SNRPA-208ENST00000600456 YDJCA8MPS7 323 aa17.16■□□□□ 0.34
SNRPA-208ENST00000600456 CEP85Q6P2H3 762 aa17.16■□□□□ 0.34
SNRPA-208ENST00000600456 SIL1Q9H173 461 aa17.16■□□□□ 0.34
SNRPA-208ENST00000600456 PA2G4Q9UQ80 394 aaKnown RBP17.16■□□□□ 0.34
SNRPA-208ENST00000600456 IRS2Q9Y4H2 1338 aa17.16■□□□□ 0.34
SNRPA-208ENST00000600456 WDR90Q96KV7 1748 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms