RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 NEK1Q96PY6 1258 aa13.2□□□□□ -0.3
ZNF544-213ENST00000599227 GPHNQ9NQX3 736 aaPredicted RBP13.2□□□□□ -0.3
ZNF544-213ENST00000599227 TAF5LO75529 589 aa13.2□□□□□ -0.3
ZNF544-213ENST00000599227 NAA30Q147X3 362 aaPredicted RBP13.2□□□□□ -0.3
ZNF544-213ENST00000599227 PTPN21Q16825 1174 aa13.2□□□□□ -0.3
ZNF544-213ENST00000599227 TPD52L1Q16890 204 aaPredicted RBP13.2□□□□□ -0.3
ZNF544-213ENST00000599227 AMOTQ4VCS5 1084 aa13.2□□□□□ -0.3
ZNF544-213ENST00000599227 TMX1Q9H3N1 280 aa13.2□□□□□ -0.3
ZNF544-213ENST00000599227 PDCP20941 246 aa13.19□□□□□ -0.3
ZNF544-213ENST00000599227 LDHAL6AQ6ZMR3 332 aa13.19□□□□□ -0.3
ZNF544-213ENST00000599227 ZKSCAN3Q9BRR0 538 aa13.19□□□□□ -0.3
ZNF544-213ENST00000599227 CBX8Q9HC52 389 aa13.19□□□□□ -0.3
ZNF544-213ENST00000599227 PEAK1Q9H792 1746 aa13.19□□□□□ -0.3
ZNF544-213ENST00000599227 MINDY4BA8MYZ0 360 aa13.19□□□□□ -0.3
ZNF544-213ENST00000599227 PES1O00541 588 aaKnown RBP13.19□□□□□ -0.3
ZNF544-213ENST00000599227 RIOK3O14730 519 aaKnown RBP13.19□□□□□ -0.3
ZNF544-213ENST00000599227 IGKV5-2P06315 115 aa13.19□□□□□ -0.3
ZNF544-213ENST00000599227 SNRPA1P09661 255 aaKnown RBP13.19□□□□□ -0.3
ZNF544-213ENST00000599227 ARID5BQ14865 1188 aa13.19□□□□□ -0.3
ZNF544-213ENST00000599227 DNAJC10Q8IXB1 793 aa13.19□□□□□ -0.3
ZNF544-213ENST00000599227 FAM177A1Q8N128 213 aaPredicted RBP13.19□□□□□ -0.3
ZNF544-213ENST00000599227 KAZALD1Q96I82 304 aa13.19□□□□□ -0.3
ZNF544-213ENST00000599227 GJB4Q9NTQ9 266 aa13.19□□□□□ -0.3
ZNF544-213ENST00000599227 SSH2Q76I76 1423 aa13.18□□□□□ -0.3
ZNF544-213ENST00000599227 AOX1Q06278 1338 aa13.18□□□□□ -0.3
ZNF544-213ENST00000599227 RPS6KB1P23443 525 aa13.18□□□□□ -0.3
ZNF544-213ENST00000599227 UVSSAQ2YD98 709 aa13.18□□□□□ -0.3
ZNF544-213ENST00000599227 FAM200AQ8TCP9 573 aa13.18□□□□□ -0.3
ZNF544-213ENST00000599227 MYL10Q9BUA6 226 aa13.18□□□□□ -0.3
ZNF544-213ENST00000599227 DBNLQ9UJU6 430 aaKnown RBP13.18□□□□□ -0.3
ZNF544-213ENST00000599227 ZCRB1Q8TBF4 217 aaKnown RBP13.18□□□□□ -0.3
ZNF544-213ENST00000599227 LEO1Q8WVC0 666 aaPredicted RBP13.18□□□□□ -0.3
ZNF544-213ENST00000599227 MAP4K1Q92918 833 aa13.18□□□□□ -0.3
ZNF544-213ENST00000599227 KCNF1Q9H3M0 494 aa13.18□□□□□ -0.3
ZNF544-213ENST00000599227 BTG4Q9NY30 223 aa13.18□□□□□ -0.3
ZNF544-213ENST00000599227 ASAP1Q9ULH1 1129 aa13.18□□□□□ -0.3
ZNF544-213ENST00000599227 hCG_1642624A0A1W2PR95 340 aa13.17□□□□□ -0.3
ZNF544-213ENST00000599227 C19orf44Q9H6X5 657 aa13.17□□□□□ -0.3
ZNF544-213ENST00000599227 CLIP2Q9UDT6 1046 aa13.17□□□□□ -0.3
ZNF544-213ENST00000599227 MRVI1Q9Y6F6 885 aa13.17□□□□□ -0.3
ZNF544-213ENST00000599227 PLEKHG1Q9ULL1 1385 aa13.17□□□□□ -0.3
ZNF544-213ENST00000599227 ALDH1L1O75891 902 aa13.17□□□□□ -0.3
ZNF544-213ENST00000599227 HDAC5Q9UQL6 1122 aa13.17□□□□□ -0.3
ZNF544-213ENST00000599227 MICU3Q86XE3 530 aa13.17□□□□□ -0.3
ZNF544-213ENST00000599227 MIGA1Q8NAN2 632 aa13.17□□□□□ -0.3
ZNF544-213ENST00000599227 ZNF219Q9P2Y4 722 aaPredicted RBP13.17□□□□□ -0.3
ZNF544-213ENST00000599227 ITSN1Q15811 1721 aa13.16□□□□□ -0.3
ZNF544-213ENST00000599227 TOB2Q14106 344 aaPredicted RBP13.16□□□□□ -0.3
ZNF544-213ENST00000599227 KIF6Q6ZMV9 814 aa13.16□□□□□ -0.3
ZNF544-213ENST00000599227 CMTR1Q8N1G2 835 aaKnown RBP13.16□□□□□ -0.3
ZNF544-213ENST00000599227 MYRIPQ8NFW9 859 aa13.16□□□□□ -0.3
ZNF544-213ENST00000599227 BCL2L12Q9HB09 334 aa13.16□□□□□ -0.3
ZNF544-213ENST00000599227 DDX21Q9NR30 783 aaKnown RBP eCLIP13.16□□□□□ -0.3
ZNF544-213ENST00000599227 RIMBP3CA6NJZ7 1639 aa13.16□□□□□ -0.3
ZNF544-213ENST00000599227 RIMBP3BA6NNM3 1639 aa13.16□□□□□ -0.3
ZNF544-213ENST00000599227 RIMBP3Q9UFD9 1639 aa13.16□□□□□ -0.3
ZNF544-213ENST00000599227 U2AF2P26368 475 aaKnown RBP eCLIP13.16□□□□□ -0.3
ZNF544-213ENST00000599227 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.16□□□□□ -0.3
ZNF544-213ENST00000599227 NEURL1BA8MQ27 555 aa13.16□□□□□ -0.3
ZNF544-213ENST00000599227 HIP1O00291 1037 aa13.16□□□□□ -0.3
ZNF544-213ENST00000599227 GCKRQ14397 625 aa13.16□□□□□ -0.3
ZNF544-213ENST00000599227 CCDC73Q6ZRK6 1079 aa13.16□□□□□ -0.3
ZNF544-213ENST00000599227 CCAR1Q8IX12 1150 aaKnown RBP13.16□□□□□ -0.3
ZNF544-213ENST00000599227 CHMP4AQ9BY43 222 aa13.16□□□□□ -0.3
ZNF544-213ENST00000599227 SCAND2PQ9GZW5 306 aaPredicted RBP13.16□□□□□ -0.3
ZNF544-213ENST00000599227 NRKQ7Z2Y5 1582 aa13.15□□□□□ -0.3
ZNF544-213ENST00000599227 CYP21A2P08686 494 aa13.15□□□□□ -0.3
ZNF544-213ENST00000599227 TNNT1P13805 278 aa13.15□□□□□ -0.3
ZNF544-213ENST00000599227 TRDNQ13061 729 aa13.15□□□□□ -0.3
ZNF544-213ENST00000599227 CCDC158Q5M9N0 1113 aa13.15□□□□□ -0.3
ZNF544-213ENST00000599227 PDCL2Q8N4E4 241 aa13.15□□□□□ -0.3
ZNF544-213ENST00000599227 MPHOSPH8Q99549 860 aa13.15□□□□□ -0.3
ZNF544-213ENST00000599227 INCENPQ9NQS7 918 aa13.15□□□□□ -0.3
ZNF544-213ENST00000599227 NPHP3Q7Z494 1330 aa13.15□□□□□ -0.3
ZNF544-213ENST00000599227 HMGN5P82970 282 aaKnown RBP13.15□□□□□ -0.3
ZNF544-213ENST00000599227 ANKRD1Q15327 319 aa13.15□□□□□ -0.3
ZNF544-213ENST00000599227 TNNI3KQ59H18 835 aa13.15□□□□□ -0.3
ZNF544-213ENST00000599227 ARHGEF25Q86VW2 580 aa13.15□□□□□ -0.3
ZNF544-213ENST00000599227 PDILTQ8N807 584 aa13.15□□□□□ -0.3
ZNF544-213ENST00000599227 RASSF8Q8NHQ8 419 aa13.15□□□□□ -0.3
ZNF544-213ENST00000599227 PGBD1Q96JS3 809 aa13.15□□□□□ -0.3
ZNF544-213ENST00000599227 FPGT-TNNI3KV9GXZ4 949 aa13.15□□□□□ -0.3
ZNF544-213ENST00000599227 CYP27B1O15528 508 aa13.14□□□□□ -0.31
ZNF544-213ENST00000599227 KINO60870 393 aaKnown RBP13.14□□□□□ -0.31
ZNF544-213ENST00000599227 MARCKSP29966 332 aaPredicted RBP13.14□□□□□ -0.31
ZNF544-213ENST00000599227 ADORA1P30542 326 aa13.14□□□□□ -0.31
ZNF544-213ENST00000599227 CCAR2Q8N163 923 aaKnown RBP13.14□□□□□ -0.31
ZNF544-213ENST00000599227 SPATA31D1Q6ZQQ2 1576 aa13.14□□□□□ -0.31
ZNF544-213ENST00000599227 MAP7D2Q96T17 732 aa13.14□□□□□ -0.31
ZNF544-213ENST00000599227 A0A1B0GVL5 298 aa13.14□□□□□ -0.31
ZNF544-213ENST00000599227 IFIT5Q13325 482 aaKnown RBP13.14□□□□□ -0.31
ZNF544-213ENST00000599227 FSIP1Q8NA03 581 aa13.14□□□□□ -0.31
ZNF544-213ENST00000599227 UIMC1Q96RL1 719 aa13.14□□□□□ -0.31
ZNF544-213ENST00000599227 SMC2O95347 1197 aa13.13□□□□□ -0.31
ZNF544-213ENST00000599227 SLC52A2Q9HAB3 445 aa13.13□□□□□ -0.31
ZNF544-213ENST00000599227 CWC25Q9NXE8 425 aaPredicted RBP13.13□□□□□ -0.31
ZNF544-213ENST00000599227 C3P01024 1663 aa13.13□□□□□ -0.31
ZNF544-213ENST00000599227 SCRN1Q12765 414 aa13.13□□□□□ -0.31
ZNF544-213ENST00000599227 SPECC1Q5M775 1068 aa13.13□□□□□ -0.31
ZNF544-213ENST00000599227 TECPR2O15040 1411 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms