RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 PANK1Q8TE04 598 aa24.64■■□□□ 1.54
SHKBP1-214ENST00000597396 LRRFIP2Q9Y608 721 aaKnown RBP24.64■■□□□ 1.54
SHKBP1-214ENST00000597396 A0A1B0GUL6 1792 aa24.63■■□□□ 1.53
SHKBP1-214ENST00000597396 GPSM2P81274 684 aa24.63■■□□□ 1.53
SHKBP1-214ENST00000597396 ANKIB1Q9P2G1 1089 aa24.63■■□□□ 1.53
SHKBP1-214ENST00000597396 DUOX1Q9NRD9 1551 aa24.63■■□□□ 1.53
SHKBP1-214ENST00000597396 NMRK2Q9NPI5 230 aa24.62■■□□□ 1.53
SHKBP1-214ENST00000597396 ZNF594Q96JF6 807 aaPredicted RBP24.61■■□□□ 1.53
SHKBP1-214ENST00000597396 RTFDC1Q9BY42 306 aaPredicted RBP24.61■■□□□ 1.53
SHKBP1-214ENST00000597396 ZC3H4Q9UPT8 1303 aaKnown RBP24.61■■□□□ 1.53
SHKBP1-214ENST00000597396 C6orf229H3BNL8 230 aa24.6■■□□□ 1.53
SHKBP1-214ENST00000597396 PPIP5K2O43314 1243 aa24.6■■□□□ 1.53
SHKBP1-214ENST00000597396 LARGE2Q8N3Y3 721 aa24.6■■□□□ 1.53
SHKBP1-214ENST00000597396 MINPP1Q9UNW1 487 aa24.6■■□□□ 1.53
SHKBP1-214ENST00000597396 XDHP47989 1333 aa24.6■■□□□ 1.53
SHKBP1-214ENST00000597396 TOMM70O94826 608 aa24.59■■□□□ 1.53
SHKBP1-214ENST00000597396 GNAI2P04899 355 aa24.59■■□□□ 1.53
SHKBP1-214ENST00000597396 CNNM1Q9NRU3 951 aa24.59■■□□□ 1.53
SHKBP1-214ENST00000597396 PODXL2Q9NZ53 605 aa24.59■■□□□ 1.53
SHKBP1-214ENST00000597396 GGA1Q9UJY5 639 aa24.59■■□□□ 1.53
SHKBP1-214ENST00000597396 UFL1O94874 794 aa24.58■■□□□ 1.53
SHKBP1-214ENST00000597396 AOC3Q16853 763 aa24.58■■□□□ 1.53
SHKBP1-214ENST00000597396 LDHAL6AQ6ZMR3 332 aa24.58■■□□□ 1.53
SHKBP1-214ENST00000597396 JDP2Q8WYK2 163 aa24.58■■□□□ 1.53
SHKBP1-214ENST00000597396 VPS33BQ9H267 617 aa24.58■■□□□ 1.53
SHKBP1-214ENST00000597396 TBC1D16Q8TBP0 767 aa24.57■■□□□ 1.52
SHKBP1-214ENST00000597396 EYA3Q99504 573 aa24.57■■□□□ 1.52
SHKBP1-214ENST00000597396 ANKRD2Q9GZV1 360 aa24.57■■□□□ 1.52
SHKBP1-214ENST00000597396 POLLQ9UGP5 575 aa24.57■■□□□ 1.52
SHKBP1-214ENST00000597396 CEP350Q5VT06 3117 aa24.57■■□□□ 1.52
SHKBP1-214ENST00000597396 ATP2B4P23634 1241 aa24.56■■□□□ 1.52
SHKBP1-214ENST00000597396 COG6Q9Y2V7 657 aa24.56■■□□□ 1.52
SHKBP1-214ENST00000597396 KDM2BQ8NHM5 1336 aa24.56■■□□□ 1.52
SHKBP1-214ENST00000597396 CHRNDQ07001 517 aa24.55■■□□□ 1.52
SHKBP1-214ENST00000597396 KIAA2012Q0VF49 1180 aa24.55■■□□□ 1.52
SHKBP1-214ENST00000597396 PDE3AQ14432 1141 aa24.55■■□□□ 1.52
SHKBP1-214ENST00000597396 MVPQ14764 893 aaKnown RBP24.55■■□□□ 1.52
SHKBP1-214ENST00000597396 WASHC4Q2M389 1173 aa24.55■■□□□ 1.52
SHKBP1-214ENST00000597396 NIM1KQ8IY84 436 aa24.55■■□□□ 1.52
SHKBP1-214ENST00000597396 COL4A5P29400 1685 aa24.55■■□□□ 1.52
SHKBP1-214ENST00000597396 RIMBP2O15034 1052 aa24.54■■□□□ 1.52
SHKBP1-214ENST00000597396 ZBTB7BO15156 539 aaPredicted RBP24.54■■□□□ 1.52
SHKBP1-214ENST00000597396 C16orf71Q8IYS4 520 aaPredicted RBP24.54■■□□□ 1.52
SHKBP1-214ENST00000597396 GPR101Q96P66 508 aaPredicted RBP24.54■■□□□ 1.52
SHKBP1-214ENST00000597396 DDX19BQ9UMR2 479 aa24.54■■□□□ 1.52
SHKBP1-214ENST00000597396 KLHDC4Q8TBB5 520 aa24.53■■□□□ 1.52
SHKBP1-214ENST00000597396 ZC3H12CQ9C0D7 883 aaKnown RBP24.53■■□□□ 1.52
SHKBP1-214ENST00000597396 KCNJ4P48050 445 aa24.52■■□□□ 1.52
SHKBP1-214ENST00000597396 RFX5P48382 616 aaPredicted RBP24.52■■□□□ 1.52
SHKBP1-214ENST00000597396 RRP1P56182 461 aaKnown RBP24.52■■□□□ 1.52
SHKBP1-214ENST00000597396 C20orf194Q5TEA3 1177 aa24.52■■□□□ 1.52
SHKBP1-214ENST00000597396 DPY19L2Q6NUT2 758 aa24.52■■□□□ 1.52
SHKBP1-214ENST00000597396 HELBQ8NG08 1087 aaPredicted RBP24.52■■□□□ 1.52
SHKBP1-214ENST00000597396 PUS3Q9BZE2 481 aaKnown RBP24.52■■□□□ 1.52
SHKBP1-214ENST00000597396 LEMD3Q9Y2U8 911 aa24.52■■□□□ 1.52
SHKBP1-214ENST00000597396 SRGAP3O43295 1099 aa24.51■■□□□ 1.51
SHKBP1-214ENST00000597396 APLP1P51693 650 aa24.51■■□□□ 1.51
SHKBP1-214ENST00000597396 EIF6P56537 245 aaKnown RBP24.51■■□□□ 1.51
SHKBP1-214ENST00000597396 CHMP4BQ9H444 224 aaKnown RBP24.51■■□□□ 1.51
SHKBP1-214ENST00000597396 C1orf115Q9H7X2 142 aa24.51■■□□□ 1.51
SHKBP1-214ENST00000597396 G3V3G9 751 aa24.5■■□□□ 1.51
SHKBP1-214ENST00000597396 TAF5LO75529 589 aa24.5■■□□□ 1.51
SHKBP1-214ENST00000597396 PTPN12Q05209 780 aaKnown RBP24.5■■□□□ 1.51
SHKBP1-214ENST00000597396 MTX1Q13505 466 aa24.5■■□□□ 1.51
SHKBP1-214ENST00000597396 LRRC24Q50LG9 513 aa24.5■■□□□ 1.51
SHKBP1-214ENST00000597396 DCAF8Q5TAQ9 597 aa24.5■■□□□ 1.51
SHKBP1-214ENST00000597396 RBM46Q8TBY0 533 aaKnown RBP24.5■■□□□ 1.51
SHKBP1-214ENST00000597396 RRAGCQ9HB90 399 aa24.5■■□□□ 1.51
SHKBP1-214ENST00000597396 ZNF804BA4D1E1 1349 aa24.5■■□□□ 1.51
SHKBP1-214ENST00000597396 GLTPD2A6NH11 291 aa24.49■■□□□ 1.51
SHKBP1-214ENST00000597396 FZD9O00144 591 aa24.49■■□□□ 1.51
SHKBP1-214ENST00000597396 RIPOR2Q9Y4F9 1068 aa24.49■■□□□ 1.51
SHKBP1-214ENST00000597396 MROH5Q6ZUA9 1318 aa24.49■■□□□ 1.51
SHKBP1-214ENST00000597396 EYA2O00167 538 aa24.48■■□□□ 1.51
SHKBP1-214ENST00000597396 METTL24Q5JXM2 366 aa24.48■■□□□ 1.51
SHKBP1-214ENST00000597396 ZNF541Q9H0D2 1346 aa24.48■■□□□ 1.51
SHKBP1-214ENST00000597396 SIL1Q9H173 461 aa24.48■■□□□ 1.51
SHKBP1-214ENST00000597396 DBNDD1Q9H9R9 158 aa24.48■■□□□ 1.51
SHKBP1-214ENST00000597396 MED23Q9ULK4 1368 aa24.48■■□□□ 1.51
SHKBP1-214ENST00000597396 ZNRF3Q9ULT6 936 aa24.48■■□□□ 1.51
SHKBP1-214ENST00000597396 WTIPA6NIX2 430 aaPredicted RBP24.47■■□□□ 1.51
SHKBP1-214ENST00000597396 DOK7Q18PE1 504 aa24.47■■□□□ 1.51
SHKBP1-214ENST00000597396 PA2G4Q9UQ80 394 aaKnown RBP24.47■■□□□ 1.51
SHKBP1-214ENST00000597396 FBXO3Q9UK99 471 aa24.46■■□□□ 1.51
SHKBP1-214ENST00000597396 PSME4Q14997 1843 aa24.46■■□□□ 1.51
SHKBP1-214ENST00000597396 WDR90Q96KV7 1748 aa24.46■■□□□ 1.51
SHKBP1-214ENST00000597396 SCN9AQ15858 1988 aa24.45■■□□□ 1.51
SHKBP1-214ENST00000597396 PNMA6EA0A0J9YXQ4 647 aa24.45■■□□□ 1.5
SHKBP1-214ENST00000597396 ECE2O60344 883 aa24.45■■□□□ 1.5
SHKBP1-214ENST00000597396 DDNO94850 711 aaPredicted RBP24.45■■□□□ 1.5
SHKBP1-214ENST00000597396 COPRSQ9NQ92 184 aa24.45■■□□□ 1.5
SHKBP1-214ENST00000597396 SNAP23O00161 211 aa24.44■■□□□ 1.5
SHKBP1-214ENST00000597396 ATP8B2P98198 1209 aa24.44■■□□□ 1.5
SHKBP1-214ENST00000597396 GJA3Q9Y6H8 435 aa24.44■■□□□ 1.5
SHKBP1-214ENST00000597396 SCN4AP35499 1836 aa24.43■■□□□ 1.5
SHKBP1-214ENST00000597396 CIAO1O76071 339 aa24.43■■□□□ 1.5
SHKBP1-214ENST00000597396 FSTL1Q12841 308 aa24.43■■□□□ 1.5
SHKBP1-214ENST00000597396 UBE4AQ14139 1066 aa24.43■■□□□ 1.5
SHKBP1-214ENST00000597396 ZBTB40Q9NUA8 1239 aa24.43■■□□□ 1.5
SHKBP1-214ENST00000597396 YDJCA8MPS7 323 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms