RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 ABHD8Q96I13 439 aa13.67□□□□□ -0.22
CHMP2A-202ENST00000596708 MYD88Q99836 296 aa13.67□□□□□ -0.22
CHMP2A-202ENST00000596708 PSME4Q14997 1843 aa13.67□□□□□ -0.22
CHMP2A-202ENST00000596708 ZNF853P0CG23 659 aa13.66□□□□□ -0.22
CHMP2A-202ENST00000596708 HSP90B1P14625 803 aaKnown RBP13.66□□□□□ -0.22
CHMP2A-202ENST00000596708 CALD1Q05682 793 aaKnown RBP13.66□□□□□ -0.22
CHMP2A-202ENST00000596708 ZBTB38Q8NAP3 1195 aaPredicted RBP13.66□□□□□ -0.22
CHMP2A-202ENST00000596708 TBC1D16Q8TBP0 767 aa13.66□□□□□ -0.22
CHMP2A-202ENST00000596708 ZC3H12CQ9C0D7 883 aaKnown RBP13.66□□□□□ -0.22
CHMP2A-202ENST00000596708 PRKRIP1Q9H875 184 aaPredicted RBP13.66□□□□□ -0.22
CHMP2A-202ENST00000596708 SEC31BQ9NQW1 1179 aa13.66□□□□□ -0.22
CHMP2A-202ENST00000596708 KCNQ5Q9NR82 932 aa13.66□□□□□ -0.22
CHMP2A-202ENST00000596708 IFT57Q9NWB7 429 aa13.66□□□□□ -0.22
CHMP2A-202ENST00000596708 RPS12P25398 132 aaKnown RBP13.65□□□□□ -0.22
CHMP2A-202ENST00000596708 JARID2Q92833 1246 aaPredicted RBP13.65□□□□□ -0.22
CHMP2A-202ENST00000596708 DCPSQ96C86 337 aaKnown RBP13.65□□□□□ -0.22
CHMP2A-202ENST00000596708 HHIPL1Q96JK4 782 aa13.65□□□□□ -0.22
CHMP2A-202ENST00000596708 ANKIB1Q9P2G1 1089 aa13.65□□□□□ -0.22
CHMP2A-202ENST00000596708 CACNA1FO60840 1977 aa13.64□□□□□ -0.23
CHMP2A-202ENST00000596708 HUNKP57058 714 aa13.64□□□□□ -0.23
CHMP2A-202ENST00000596708 CCDC152Q4G0S7 254 aa13.64□□□□□ -0.23
CHMP2A-202ENST00000596708 DLK2Q6UY11 383 aa13.64□□□□□ -0.23
CHMP2A-202ENST00000596708 KRT26Q7Z3Y9 468 aa13.64□□□□□ -0.23
CHMP2A-202ENST00000596708 CCDC191Q8NCU4 936 aa13.64□□□□□ -0.23
CHMP2A-202ENST00000596708 CCDC85AQ96PX6 553 aaPredicted RBP13.64□□□□□ -0.23
CHMP2A-202ENST00000596708 RTL9Q8NET4 1388 aa13.63□□□□□ -0.23
CHMP2A-202ENST00000596708 CCDC85CA6NKD9 419 aa13.63□□□□□ -0.23
CHMP2A-202ENST00000596708 CA12O43570 354 aa13.63□□□□□ -0.23
CHMP2A-202ENST00000596708 PDE8AO60658 829 aa13.63□□□□□ -0.23
CHMP2A-202ENST00000596708 UFL1O94874 794 aa13.63□□□□□ -0.23
CHMP2A-202ENST00000596708 DDX58O95786 925 aaKnown RBP13.63□□□□□ -0.23
CHMP2A-202ENST00000596708 PCCAP05165 728 aaPredicted RBP13.63□□□□□ -0.23
CHMP2A-202ENST00000596708 CWC25Q9NXE8 425 aaPredicted RBP13.63□□□□□ -0.23
CHMP2A-202ENST00000596708 GGA1Q9UJY5 639 aa13.63□□□□□ -0.23
CHMP2A-202ENST00000596708 EGFRP00533 1210 aa13.62□□□□□ -0.23
CHMP2A-202ENST00000596708 BRPF1P55201 1214 aaPredicted RBP13.62□□□□□ -0.23
CHMP2A-202ENST00000596708 KIF4BQ2VIQ3 1234 aa13.62□□□□□ -0.23
CHMP2A-202ENST00000596708 CCDC30Q5VVM6 783 aa13.62□□□□□ -0.23
CHMP2A-202ENST00000596708 ANKRD18AQ8IVF6 992 aa13.62□□□□□ -0.23
CHMP2A-202ENST00000596708 C2orf69Q8N8R5 385 aa13.62□□□□□ -0.23
CHMP2A-202ENST00000596708 C8orf58Q8NAV2 365 aa13.62□□□□□ -0.23
CHMP2A-202ENST00000596708 METTL22Q9BUU2 404 aaPredicted RBP13.62□□□□□ -0.23
CHMP2A-202ENST00000596708 CHMP4AQ9BY43 222 aa13.62□□□□□ -0.23
CHMP2A-202ENST00000596708 GBA2Q9HCG7 927 aaPredicted RBP13.62□□□□□ -0.23
CHMP2A-202ENST00000596708 PODXL2Q9NZ53 605 aa13.62□□□□□ -0.23
CHMP2A-202ENST00000596708 ADM5C9JUS6 153 aa13.61□□□□□ -0.23
CHMP2A-202ENST00000596708 VIL1P09327 827 aaKnown RBP13.61□□□□□ -0.23
CHMP2A-202ENST00000596708 NOGQ13253 232 aa13.61□□□□□ -0.23
CHMP2A-202ENST00000596708 RGMBQ6NW40 437 aa13.61□□□□□ -0.23
CHMP2A-202ENST00000596708 ZIC5Q96T25 663 aa13.61□□□□□ -0.23
CHMP2A-202ENST00000596708 SULF1Q8IWU6 871 aa13.6□□□□□ -0.23
CHMP2A-202ENST00000596708 MAP3K2Q9Y2U5 619 aa13.6□□□□□ -0.23
CHMP2A-202ENST00000596708 ATP2B4P23634 1241 aa13.59□□□□□ -0.23
CHMP2A-202ENST00000596708 ZNF157P51786 506 aaPredicted RBP13.59□□□□□ -0.23
CHMP2A-202ENST00000596708 RSBN1LQ6PCB5 846 aaPredicted RBP13.59□□□□□ -0.23
CHMP2A-202ENST00000596708 TSPYL6Q8N831 410 aa13.59□□□□□ -0.23
CHMP2A-202ENST00000596708 GGA3Q9NZ52 723 aa13.59□□□□□ -0.23
CHMP2A-202ENST00000596708 XDHP47989 1333 aa13.59□□□□□ -0.23
CHMP2A-202ENST00000596708 PI4KAP2A4QPH2 592 aa13.58□□□□□ -0.24
CHMP2A-202ENST00000596708 NEXNQ0ZGT2 675 aa13.58□□□□□ -0.24
CHMP2A-202ENST00000596708 SCARF1Q14162 830 aa13.58□□□□□ -0.24
CHMP2A-202ENST00000596708 FAM161AQ3B820 660 aa13.58□□□□□ -0.24
CHMP2A-202ENST00000596708 KSR2Q6VAB6 950 aa13.58□□□□□ -0.24
CHMP2A-202ENST00000596708 PI4KAP1Q8N8J0 262 aa13.58□□□□□ -0.24
CHMP2A-202ENST00000596708 AGBL3Q8NEM8 1001 aa13.58□□□□□ -0.24
CHMP2A-202ENST00000596708 CCDC102AQ96A19 550 aa13.58□□□□□ -0.24
CHMP2A-202ENST00000596708 CDC5LQ99459 802 aaKnown RBP13.58□□□□□ -0.24
CHMP2A-202ENST00000596708 STK31Q9BXU1 1019 aa13.58□□□□□ -0.24
CHMP2A-202ENST00000596708 MCOLN1Q9GZU1 580 aa13.58□□□□□ -0.24
CHMP2A-202ENST00000596708 ASTN2O75129 1339 aaPredicted RBP13.58□□□□□ -0.24
CHMP2A-202ENST00000596708 CTSWP56202 376 aa13.57□□□□□ -0.24
CHMP2A-202ENST00000596708 KIF23Q02241 960 aaPredicted RBP13.57□□□□□ -0.24
CHMP2A-202ENST00000596708 DGKZQ13574 1117 aa13.57□□□□□ -0.24
CHMP2A-202ENST00000596708 USP17L3A6NCW0 530 aa13.56□□□□□ -0.24
CHMP2A-202ENST00000596708 USP17L4A6NCW7 530 aa13.56□□□□□ -0.24
CHMP2A-202ENST00000596708 FAM155AB1AL88 458 aaPredicted RBP13.56□□□□□ -0.24
CHMP2A-202ENST00000596708 IGKV5-2P06315 115 aa13.56□□□□□ -0.24
CHMP2A-202ENST00000596708 USP17L8P0C7I0 530 aa13.56□□□□□ -0.24
CHMP2A-202ENST00000596708 ANGEL2Q5VTE6 544 aaKnown RBP13.56□□□□□ -0.24
CHMP2A-202ENST00000596708 USP17L1Q7RTZ2 530 aa13.56□□□□□ -0.24
CHMP2A-202ENST00000596708 PODNQ7Z5L7 613 aa13.56□□□□□ -0.24
CHMP2A-202ENST00000596708 TSR2Q969E8 191 aaKnown RBP13.56□□□□□ -0.24
CHMP2A-202ENST00000596708 FBXW7Q969H0 707 aa13.56□□□□□ -0.24
CHMP2A-202ENST00000596708 CDCA5Q96FF9 252 aa13.56□□□□□ -0.24
CHMP2A-202ENST00000596708 ZNF280AP59817 542 aaPredicted RBP13.55□□□□□ -0.24
CHMP2A-202ENST00000596708 CWF19L2Q2TBE0 894 aaKnown RBP13.55□□□□□ -0.24
CHMP2A-202ENST00000596708 TTLL11Q8NHH1 800 aa13.55□□□□□ -0.24
CHMP2A-202ENST00000596708 GREM2Q9H772 168 aa13.55□□□□□ -0.24
CHMP2A-202ENST00000596708 MYOZ2Q9NPC6 264 aa13.55□□□□□ -0.24
CHMP2A-202ENST00000596708 BSDC1Q9NW68 430 aaPredicted RBP13.55□□□□□ -0.24
CHMP2A-202ENST00000596708 WTIPA6NIX2 430 aaPredicted RBP13.54□□□□□ -0.24
CHMP2A-202ENST00000596708 TRPA1O75762 1119 aa13.54□□□□□ -0.24
CHMP2A-202ENST00000596708 SLC4A2P04920 1241 aa13.54□□□□□ -0.24
CHMP2A-202ENST00000596708 CCT4P50991 539 aaKnown RBP13.54□□□□□ -0.24
CHMP2A-202ENST00000596708 MLLT1Q03111 559 aaPredicted RBP13.54□□□□□ -0.24
CHMP2A-202ENST00000596708 TWISTNBQ3B726 338 aaPredicted RBP13.54□□□□□ -0.24
CHMP2A-202ENST00000596708 MINPP1Q9UNW1 487 aa13.54□□□□□ -0.24
CHMP2A-202ENST00000596708 ZNF646O15015 1829 aaPredicted RBP13.53□□□□□ -0.24
CHMP2A-202ENST00000596708 NEURL1BA8MQ27 555 aa13.53□□□□□ -0.24
CHMP2A-202ENST00000596708 SLC10A3P09131 477 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms