RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 CHMP4AQ9BY43 222 aa22.63■■□□□ 1.21
SHKBP1-203ENST00000594298 RTL9Q8NET4 1388 aa22.63■■□□□ 1.21
SHKBP1-203ENST00000594298 CA12O43570 354 aa22.62■■□□□ 1.21
SHKBP1-203ENST00000594298 PCCAP05165 728 aaPredicted RBP22.62■■□□□ 1.21
SHKBP1-203ENST00000594298 SAMD7Q7Z3H4 446 aa22.62■■□□□ 1.21
SHKBP1-203ENST00000594298 MYD88Q99836 296 aa22.62■■□□□ 1.21
SHKBP1-203ENST00000594298 ZNF408Q9H9D4 720 aa22.62■■□□□ 1.21
SHKBP1-203ENST00000594298 ELL2O00472 640 aaPredicted RBP22.61■■□□□ 1.21
SHKBP1-203ENST00000594298 BRPF1P55201 1214 aaPredicted RBP22.61■■□□□ 1.21
SHKBP1-203ENST00000594298 DOK7Q18PE1 504 aa22.61■■□□□ 1.21
SHKBP1-203ENST00000594298 USP48Q86UV5 1035 aa22.61■■□□□ 1.21
SHKBP1-203ENST00000594298 ABHD8Q96I13 439 aa22.61■■□□□ 1.21
SHKBP1-203ENST00000594298 SEC31BQ9NQW1 1179 aa22.61■■□□□ 1.21
SHKBP1-203ENST00000594298 PDE8AO60658 829 aa22.6■■□□□ 1.21
SHKBP1-203ENST00000594298 CCDC152Q4G0S7 254 aa22.6■■□□□ 1.21
SHKBP1-203ENST00000594298 C8orf58Q8NAV2 365 aa22.6■■□□□ 1.21
SHKBP1-203ENST00000594298 METTL22Q9BUU2 404 aaPredicted RBP22.6■■□□□ 1.21
SHKBP1-203ENST00000594298 ZC3H12CQ9C0D7 883 aaKnown RBP22.6■■□□□ 1.21
SHKBP1-203ENST00000594298 KCNQ5Q9NR82 932 aa22.6■■□□□ 1.21
SHKBP1-203ENST00000594298 CWC25Q9NXE8 425 aaPredicted RBP22.6■■□□□ 1.21
SHKBP1-203ENST00000594298 DDX58O95786 925 aaKnown RBP22.59■■□□□ 1.21
SHKBP1-203ENST00000594298 EGFRP00533 1210 aa22.59■■□□□ 1.21
SHKBP1-203ENST00000594298 VIL1P09327 827 aaKnown RBP22.59■■□□□ 1.21
SHKBP1-203ENST00000594298 TBC1D10BQ4KMP7 808 aaPredicted RBP22.59■■□□□ 1.21
SHKBP1-203ENST00000594298 CCDC30Q5VVM6 783 aa22.59■■□□□ 1.21
SHKBP1-203ENST00000594298 KRT26Q7Z3Y9 468 aa22.58■■□□□ 1.21
SHKBP1-203ENST00000594298 GGA1Q9UJY5 639 aa22.58■■□□□ 1.21
SHKBP1-203ENST00000594298 ZNF609O15014 1411 aa22.57■■□□□ 1.2
SHKBP1-203ENST00000594298 UFL1O94874 794 aa22.57■■□□□ 1.2
SHKBP1-203ENST00000594298 ANKIB1Q9P2G1 1089 aa22.57■■□□□ 1.2
SHKBP1-203ENST00000594298 HUNKP57058 714 aa22.56■■□□□ 1.2
SHKBP1-203ENST00000594298 NOGQ13253 232 aa22.56■■□□□ 1.2
SHKBP1-203ENST00000594298 NCBP3Q53F19 620 aaKnown RBP22.56■■□□□ 1.2
SHKBP1-203ENST00000594298 FAM9BQ8IZU0 186 aa22.56■■□□□ 1.2
SHKBP1-203ENST00000594298 DCPSQ96C86 337 aaKnown RBP22.56■■□□□ 1.2
SHKBP1-203ENST00000594298 KIF4BQ2VIQ3 1234 aa22.55■■□□□ 1.2
SHKBP1-203ENST00000594298 DLK2Q6UY11 383 aa22.55■■□□□ 1.2
SHKBP1-203ENST00000594298 TSKSQ9UJT2 592 aa22.55■■□□□ 1.2
SHKBP1-203ENST00000594298 G3V3G9 751 aa22.54■■□□□ 1.2
SHKBP1-203ENST00000594298 CCDC27Q2M243 656 aa22.54■■□□□ 1.2
SHKBP1-203ENST00000594298 RBM26Q5T8P6 1007 aaKnown RBP22.54■■□□□ 1.2
SHKBP1-203ENST00000594298 DCAF8Q5TAQ9 597 aa22.54■■□□□ 1.2
SHKBP1-203ENST00000594298 KSR2Q6VAB6 950 aa22.54■■□□□ 1.2
SHKBP1-203ENST00000594298 ANKRD18AQ8IVF6 992 aa22.54■■□□□ 1.2
SHKBP1-203ENST00000594298 TSPYL6Q8N831 410 aa22.54■■□□□ 1.2
SHKBP1-203ENST00000594298 MAP3K2Q9Y2U5 619 aa22.54■■□□□ 1.2
SHKBP1-203ENST00000594298 XDHP47989 1333 aa22.54■■□□□ 1.2
SHKBP1-203ENST00000594298 ADM5C9JUS6 153 aa22.53■■□□□ 1.2
SHKBP1-203ENST00000594298 ZNF280AP59817 542 aaPredicted RBP22.53■■□□□ 1.2
SHKBP1-203ENST00000594298 RGMBQ6NW40 437 aa22.53■■□□□ 1.2
SHKBP1-203ENST00000594298 AGBL3Q8NEM8 1001 aa22.53■■□□□ 1.2
SHKBP1-203ENST00000594298 JARID2Q92833 1246 aaPredicted RBP22.53■■□□□ 1.2
SHKBP1-203ENST00000594298 GBA2Q9HCG7 927 aaPredicted RBP22.53■■□□□ 1.2
SHKBP1-203ENST00000594298 CCER2I3L3R5 266 aa22.52■■□□□ 1.2
SHKBP1-203ENST00000594298 IGKV5-2P06315 115 aa22.52■■□□□ 1.2
SHKBP1-203ENST00000594298 ATP2B4P23634 1241 aa22.52■■□□□ 1.2
SHKBP1-203ENST00000594298 RSBN1LQ6PCB5 846 aaPredicted RBP22.52■■□□□ 1.2
SHKBP1-203ENST00000594298 C2orf69Q8N8R5 385 aa22.52■■□□□ 1.2
SHKBP1-203ENST00000594298 CCDC85AQ96PX6 553 aaPredicted RBP22.52■■□□□ 1.2
SHKBP1-203ENST00000594298 PI4KAP2A4QPH2 592 aa22.51■■□□□ 1.19
SHKBP1-203ENST00000594298 FAM155AB1AL88 458 aaPredicted RBP22.51■■□□□ 1.19
SHKBP1-203ENST00000594298 CTSWP56202 376 aa22.51■■□□□ 1.19
SHKBP1-203ENST00000594298 DIEXFQ68CQ4 756 aaKnown RBP22.51■■□□□ 1.19
SHKBP1-203ENST00000594298 SULF1Q8IWU6 871 aa22.51■■□□□ 1.19
SHKBP1-203ENST00000594298 PI4KAP1Q8N8J0 262 aa22.51■■□□□ 1.19
SHKBP1-203ENST00000594298 CDC5LQ99459 802 aaKnown RBP22.51■■□□□ 1.19
SHKBP1-203ENST00000594298 GGA3Q9NZ52 723 aa22.51■■□□□ 1.19
SHKBP1-203ENST00000594298 PODNQ7Z5L7 613 aa22.5■■□□□ 1.19
SHKBP1-203ENST00000594298 CCDC102AQ96A19 550 aa22.5■■□□□ 1.19
SHKBP1-203ENST00000594298 ZIC5Q96T25 663 aa22.5■■□□□ 1.19
SHKBP1-203ENST00000594298 GMLQ99445 158 aa22.5■■□□□ 1.19
SHKBP1-203ENST00000594298 SCN9AQ15858 1988 aa22.5■■□□□ 1.19
SHKBP1-203ENST00000594298 TTLL11Q8NHH1 800 aa22.49■■□□□ 1.19
SHKBP1-203ENST00000594298 STK31Q9BXU1 1019 aa22.49■■□□□ 1.19
SHKBP1-203ENST00000594298 BSDC1Q9NW68 430 aaPredicted RBP22.49■■□□□ 1.19
SHKBP1-203ENST00000594298 NEXNQ0ZGT2 675 aa22.48■■□□□ 1.19
SHKBP1-203ENST00000594298 TSR2Q969E8 191 aaKnown RBP22.48■■□□□ 1.19
SHKBP1-203ENST00000594298 ASTN2O75129 1339 aaPredicted RBP22.48■■□□□ 1.19
SHKBP1-203ENST00000594298 USP17L3A6NCW0 530 aa22.47■■□□□ 1.19
SHKBP1-203ENST00000594298 USP17L4A6NCW7 530 aa22.47■■□□□ 1.19
SHKBP1-203ENST00000594298 SCARF1Q14162 830 aa22.47■■□□□ 1.19
SHKBP1-203ENST00000594298 USP17L1Q7RTZ2 530 aa22.47■■□□□ 1.19
SHKBP1-203ENST00000594298 WWC1Q8IX03 1113 aa22.47■■□□□ 1.19
SHKBP1-203ENST00000594298 CDCA5Q96FF9 252 aa22.47■■□□□ 1.19
SHKBP1-203ENST00000594298 SAGE1Q9NXZ1 904 aa22.47■■□□□ 1.19
SHKBP1-203ENST00000594298 MED23Q9ULK4 1368 aa22.47■■□□□ 1.19
SHKBP1-203ENST00000594298 NEURL1BA8MQ27 555 aa22.46■■□□□ 1.19
SHKBP1-203ENST00000594298 USP17L8P0C7I0 530 aa22.46■■□□□ 1.19
SHKBP1-203ENST00000594298 ZNF157P51786 506 aaPredicted RBP22.46■■□□□ 1.19
SHKBP1-203ENST00000594298 GREM2Q9H772 168 aa22.46■■□□□ 1.19
SHKBP1-203ENST00000594298 MINPP1Q9UNW1 487 aa22.46■■□□□ 1.19
SHKBP1-203ENST00000594298 PITPNM2Q9BZ72 1349 aa22.46■■□□□ 1.19
SHKBP1-203ENST00000594298 CCDC85CA6NKD9 419 aa22.45■■□□□ 1.18
SHKBP1-203ENST00000594298 CWF19L2Q2TBE0 894 aaKnown RBP22.45■■□□□ 1.18
SHKBP1-203ENST00000594298 TWISTNBQ3B726 338 aaPredicted RBP22.45■■□□□ 1.18
SHKBP1-203ENST00000594298 ANGEL2Q5VTE6 544 aaKnown RBP22.45■■□□□ 1.18
SHKBP1-203ENST00000594298 MCOLN1Q9GZU1 580 aa22.45■■□□□ 1.18
SHKBP1-203ENST00000594298 MYOZ2Q9NPC6 264 aa22.45■■□□□ 1.18
SHKBP1-203ENST00000594298 H7C1W4 665 aa22.44■■□□□ 1.18
SHKBP1-203ENST00000594298 SLC10A3P09131 477 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms