RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 ITPRIPQ8IWB1 547 aa24.53■■□□□ 1.52
LSM4-203ENST00000593829 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.53■■□□□ 1.52
LSM4-203ENST00000593829 PLIN1O60240 522 aa24.52■■□□□ 1.52
LSM4-203ENST00000593829 PANK1Q8TE04 598 aa24.52■■□□□ 1.52
LSM4-203ENST00000593829 ANKIB1Q9P2G1 1089 aa24.52■■□□□ 1.52
LSM4-203ENST00000593829 LRRFIP2Q9Y608 721 aaKnown RBP24.52■■□□□ 1.52
LSM4-203ENST00000593829 CCDC88AQ3V6T2 1871 aa24.51■■□□□ 1.51
LSM4-203ENST00000593829 MINPP1Q9UNW1 487 aa24.51■■□□□ 1.51
LSM4-203ENST00000593829 ZC3H4Q9UPT8 1303 aaKnown RBP24.51■■□□□ 1.51
LSM4-203ENST00000593829 VPS33BQ9H267 617 aa24.51■■□□□ 1.51
LSM4-203ENST00000593829 PODXL2Q9NZ53 605 aa24.51■■□□□ 1.51
LSM4-203ENST00000593829 B4GALNT3Q6L9W6 998 aa24.49■■□□□ 1.51
LSM4-203ENST00000593829 ZNF594Q96JF6 807 aaPredicted RBP24.49■■□□□ 1.51
LSM4-203ENST00000593829 SPEF2Q9C093 1822 aa24.49■■□□□ 1.51
LSM4-203ENST00000593829 XDHP47989 1333 aa24.49■■□□□ 1.51
LSM4-203ENST00000593829 C6orf229H3BNL8 230 aa24.48■■□□□ 1.51
LSM4-203ENST00000593829 PPIP5K2O43314 1243 aa24.48■■□□□ 1.51
LSM4-203ENST00000593829 LDHAL6AQ6ZMR3 332 aa24.48■■□□□ 1.51
LSM4-203ENST00000593829 LARGE2Q8N3Y3 721 aa24.48■■□□□ 1.51
LSM4-203ENST00000593829 JDP2Q8WYK2 163 aa24.48■■□□□ 1.51
LSM4-203ENST00000593829 POLLQ9UGP5 575 aa24.48■■□□□ 1.51
LSM4-203ENST00000593829 GGA1Q9UJY5 639 aa24.48■■□□□ 1.51
LSM4-203ENST00000593829 DICER1Q9UPY3 1922 aaKnown RBP24.47■■□□□ 1.51
LSM4-203ENST00000593829 GNAI2P04899 355 aa24.47■■□□□ 1.51
LSM4-203ENST00000593829 TBC1D16Q8TBP0 767 aa24.47■■□□□ 1.51
LSM4-203ENST00000593829 DUOX1Q9NRD9 1551 aa24.47■■□□□ 1.51
LSM4-203ENST00000593829 ANKRD2Q9GZV1 360 aa24.47■■□□□ 1.51
LSM4-203ENST00000593829 LTBP1Q14766 1721 aa24.46■■□□□ 1.51
LSM4-203ENST00000593829 ZBTB7BO15156 539 aaPredicted RBP24.46■■□□□ 1.51
LSM4-203ENST00000593829 UFL1O94874 794 aa24.46■■□□□ 1.51
LSM4-203ENST00000593829 KIAA2012Q0VF49 1180 aa24.46■■□□□ 1.51
LSM4-203ENST00000593829 AOC3Q16853 763 aa24.46■■□□□ 1.51
LSM4-203ENST00000593829 ZNF784Q8NCA9 323 aaPredicted RBP24.46■■□□□ 1.51
LSM4-203ENST00000593829 EYA3Q99504 573 aa24.46■■□□□ 1.51
LSM4-203ENST00000593829 CNNM1Q9NRU3 951 aa24.46■■□□□ 1.51
LSM4-203ENST00000593829 TIAM2Q8IVF5 1701 aa24.46■■□□□ 1.51
LSM4-203ENST00000593829 PDE3AQ14432 1141 aa24.45■■□□□ 1.51
LSM4-203ENST00000593829 WASHC4Q2M389 1173 aa24.45■■□□□ 1.51
LSM4-203ENST00000593829 ATP2B4P23634 1241 aa24.45■■□□□ 1.5
LSM4-203ENST00000593829 CHRNDQ07001 517 aa24.45■■□□□ 1.5
LSM4-203ENST00000593829 MVPQ14764 893 aaKnown RBP24.43■■□□□ 1.5
LSM4-203ENST00000593829 NIM1KQ8IY84 436 aa24.43■■□□□ 1.5
LSM4-203ENST00000593829 RFX5P48382 616 aaPredicted RBP24.43■■□□□ 1.5
LSM4-203ENST00000593829 LEMD3Q9Y2U8 911 aa24.43■■□□□ 1.5
LSM4-203ENST00000593829 COG6Q9Y2V7 657 aa24.43■■□□□ 1.5
LSM4-203ENST00000593829 FZD9O00144 591 aa24.42■■□□□ 1.5
LSM4-203ENST00000593829 C20orf194Q5TEA3 1177 aa24.42■■□□□ 1.5
LSM4-203ENST00000593829 DPY19L2Q6NUT2 758 aa24.42■■□□□ 1.5
LSM4-203ENST00000593829 KLHDC4Q8TBB5 520 aa24.42■■□□□ 1.5
LSM4-203ENST00000593829 ZNF526Q8TF50 670 aaPredicted RBP24.42■■□□□ 1.5
LSM4-203ENST00000593829 PUS3Q9BZE2 481 aaKnown RBP24.42■■□□□ 1.5
LSM4-203ENST00000593829 ZC3H12CQ9C0D7 883 aaKnown RBP24.42■■□□□ 1.5
LSM4-203ENST00000593829 RIMBP2O15034 1052 aa24.41■■□□□ 1.5
LSM4-203ENST00000593829 MTX1Q13505 466 aa24.41■■□□□ 1.5
LSM4-203ENST00000593829 GPR101Q96P66 508 aaPredicted RBP24.41■■□□□ 1.5
LSM4-203ENST00000593829 DDX19BQ9UMR2 479 aa24.41■■□□□ 1.5
LSM4-203ENST00000593829 COL4A5P29400 1685 aa24.41■■□□□ 1.5
LSM4-203ENST00000593829 GLTPD2A6NH11 291 aa24.41■■□□□ 1.5
LSM4-203ENST00000593829 RIPOR2Q9Y4F9 1068 aa24.41■■□□□ 1.5
LSM4-203ENST00000593829 KDM2BQ8NHM5 1336 aa24.4■■□□□ 1.5
LSM4-203ENST00000593829 SRGAP3O43295 1099 aa24.4■■□□□ 1.5
LSM4-203ENST00000593829 PTPN12Q05209 780 aaKnown RBP24.4■■□□□ 1.5
LSM4-203ENST00000593829 HELBQ8NG08 1087 aaPredicted RBP24.4■■□□□ 1.5
LSM4-203ENST00000593829 TAF5LO75529 589 aa24.39■■□□□ 1.5
LSM4-203ENST00000593829 KCNJ4P48050 445 aa24.39■■□□□ 1.5
LSM4-203ENST00000593829 RRP1P56182 461 aaKnown RBP24.39■■□□□ 1.5
LSM4-203ENST00000593829 GPBP1L1Q9HC44 474 aaPredicted RBP24.39■■□□□ 1.5
LSM4-203ENST00000593829 ZNRF3Q9ULT6 936 aa24.39■■□□□ 1.5
LSM4-203ENST00000593829 ZNF804BA4D1E1 1349 aa24.39■■□□□ 1.5
LSM4-203ENST00000593829 MROH5Q6ZUA9 1318 aa24.39■■□□□ 1.5
LSM4-203ENST00000593829 WTIPA6NIX2 430 aaPredicted RBP24.39■■□□□ 1.49
LSM4-203ENST00000593829 EIF6P56537 245 aaKnown RBP24.39■■□□□ 1.49
LSM4-203ENST00000593829 LRRC24Q50LG9 513 aa24.39■■□□□ 1.49
LSM4-203ENST00000593829 CHMP4BQ9H444 224 aaKnown RBP24.39■■□□□ 1.49
LSM4-203ENST00000593829 C1orf115Q9H7X2 142 aa24.38■■□□□ 1.49
LSM4-203ENST00000593829 ZNF541Q9H0D2 1346 aa24.37■■□□□ 1.49
LSM4-203ENST00000593829 EYA2O00167 538 aa24.37■■□□□ 1.49
LSM4-203ENST00000593829 COPRSQ9NQ92 184 aa24.37■■□□□ 1.49
LSM4-203ENST00000593829 FBXO3Q9UK99 471 aa24.37■■□□□ 1.49
LSM4-203ENST00000593829 MED23Q9ULK4 1368 aa24.36■■□□□ 1.49
LSM4-203ENST00000593829 G3V3G9 751 aa24.36■■□□□ 1.49
LSM4-203ENST00000593829 DCAF8Q5TAQ9 597 aa24.36■■□□□ 1.49
LSM4-203ENST00000593829 DBNDD1Q9H9R9 158 aa24.36■■□□□ 1.49
LSM4-203ENST00000593829 NOP58Q9Y2X3 529 aaKnown RBP24.36■■□□□ 1.49
LSM4-203ENST00000593829 DOK7Q18PE1 504 aa24.35■■□□□ 1.49
LSM4-203ENST00000593829 METTL24Q5JXM2 366 aa24.35■■□□□ 1.49
LSM4-203ENST00000593829 SIL1Q9H173 461 aa24.35■■□□□ 1.49
LSM4-203ENST00000593829 DDNO94850 711 aaPredicted RBP24.35■■□□□ 1.49
LSM4-203ENST00000593829 PA2G4Q9UQ80 394 aaKnown RBP24.35■■□□□ 1.49
LSM4-203ENST00000593829 PNMA6EA0A0J9YXQ4 647 aa24.34■■□□□ 1.49
LSM4-203ENST00000593829 SNAP23O00161 211 aa24.34■■□□□ 1.49
LSM4-203ENST00000593829 ECE2O60344 883 aa24.34■■□□□ 1.49
LSM4-203ENST00000593829 CIAO1O76071 339 aa24.34■■□□□ 1.49
LSM4-203ENST00000593829 ATP8B2P98198 1209 aa24.34■■□□□ 1.49
LSM4-203ENST00000593829 ZBTB40Q9NUA8 1239 aa24.34■■□□□ 1.49
LSM4-203ENST00000593829 GPC2Q8N158 579 aa24.33■■□□□ 1.49
LSM4-203ENST00000593829 A0A1B0GUL6 1792 aa24.33■■□□□ 1.49
LSM4-203ENST00000593829 YDJCA8MPS7 323 aa24.33■■□□□ 1.49
LSM4-203ENST00000593829 CXCL9Q07325 125 aa24.33■■□□□ 1.49
LSM4-203ENST00000593829 UBE4AQ14139 1066 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms