RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 HSP90B1P14625 803 aaKnown RBP17.34■□□□□ 0.37
CAPNS1-213ENST00000592354 GRM1Q13255 1194 aa17.34■□□□□ 0.37
CAPNS1-213ENST00000592354 CWF19L2Q2TBE0 894 aaKnown RBP17.34■□□□□ 0.37
CAPNS1-213ENST00000592354 KSR2Q6VAB6 950 aa17.34■□□□□ 0.37
CAPNS1-213ENST00000592354 RTL9Q8NET4 1388 aa17.34■□□□□ 0.37
CAPNS1-213ENST00000592354 EYA3Q99504 573 aa17.34■□□□□ 0.37
CAPNS1-213ENST00000592354 CHMP4AQ9BY43 222 aa17.34■□□□□ 0.37
CAPNS1-213ENST00000592354 KCNQ5Q9NR82 932 aa17.34■□□□□ 0.37
CAPNS1-213ENST00000592354 ANKIB1Q9P2G1 1089 aa17.34■□□□□ 0.37
CAPNS1-213ENST00000592354 CNOT7Q9UIV1 285 aaKnown RBP17.34■□□□□ 0.37
CAPNS1-213ENST00000592354 IL16Q14005 1332 aa17.33■□□□□ 0.36
CAPNS1-213ENST00000592354 ZNF316A6NFI3 1004 aaPredicted RBP17.33■□□□□ 0.36
CAPNS1-213ENST00000592354 HIRAP54198 1017 aaPredicted RBP17.33■□□□□ 0.36
CAPNS1-213ENST00000592354 CTSWP56202 376 aa17.33■□□□□ 0.36
CAPNS1-213ENST00000592354 CST9Q5W186 159 aa17.33■□□□□ 0.36
CAPNS1-213ENST00000592354 AIDAQ96BJ3 306 aa17.33■□□□□ 0.36
CAPNS1-213ENST00000592354 WDR33Q9C0J8 1336 aaKnown RBP17.32■□□□□ 0.36
CAPNS1-213ENST00000592354 CACNA1FO60840 1977 aa17.32■□□□□ 0.36
CAPNS1-213ENST00000592354 SLC4A2P04920 1241 aa17.32■□□□□ 0.36
CAPNS1-213ENST00000592354 NEXNQ0ZGT2 675 aa17.32■□□□□ 0.36
CAPNS1-213ENST00000592354 SAMD7Q7Z3H4 446 aa17.32■□□□□ 0.36
CAPNS1-213ENST00000592354 ZNF408Q9H9D4 720 aa17.32■□□□□ 0.36
CAPNS1-213ENST00000592354 GGA1Q9UJY5 639 aa17.32■□□□□ 0.36
CAPNS1-213ENST00000592354 ZNF646O15015 1829 aaPredicted RBP17.32■□□□□ 0.36
CAPNS1-213ENST00000592354 NEURL1BA8MQ27 555 aa17.31■□□□□ 0.36
CAPNS1-213ENST00000592354 H7C1D1 291 aa17.31■□□□□ 0.36
CAPNS1-213ENST00000592354 CELF2O95319 508 aaKnown RBP17.31■□□□□ 0.36
CAPNS1-213ENST00000592354 TBC1D10BQ4KMP7 808 aaPredicted RBP17.31■□□□□ 0.36
CAPNS1-213ENST00000592354 CYP4F22Q6NT55 531 aa17.31■□□□□ 0.36
CAPNS1-213ENST00000592354 ANKRD18AQ8IVF6 992 aa17.31■□□□□ 0.36
CAPNS1-213ENST00000592354 ZC3H12CQ9C0D7 883 aaKnown RBP17.31■□□□□ 0.36
CAPNS1-213ENST00000592354 PODXL2Q9NZ53 605 aa17.31■□□□□ 0.36
CAPNS1-213ENST00000592354 A0A1B0GUL6 1792 aa17.3■□□□□ 0.36
CAPNS1-213ENST00000592354 G3V3G9 751 aa17.3■□□□□ 0.36
CAPNS1-213ENST00000592354 EGFRP00533 1210 aa17.3■□□□□ 0.36
CAPNS1-213ENST00000592354 FLIIQ13045 1269 aa17.3■□□□□ 0.36
CAPNS1-213ENST00000592354 DCAF8Q5TAQ9 597 aa17.3■□□□□ 0.36
CAPNS1-213ENST00000592354 UBE3BQ7Z3V4 1068 aa17.3■□□□□ 0.36
CAPNS1-213ENST00000592354 CAPNS2Q96L46 248 aa17.3■□□□□ 0.36
CAPNS1-213ENST00000592354 GREM2Q9H772 168 aa17.3■□□□□ 0.36
CAPNS1-213ENST00000592354 TLL2Q9Y6L7 1015 aa17.3■□□□□ 0.36
CAPNS1-213ENST00000592354 XDHP47989 1333 aa17.29■□□□□ 0.36
CAPNS1-213ENST00000592354 FKBP5Q13451 457 aaPredicted RBP17.29■□□□□ 0.36
CAPNS1-213ENST00000592354 RBM26Q5T8P6 1007 aaKnown RBP17.29■□□□□ 0.36
CAPNS1-213ENST00000592354 ZC3H15Q8WU90 426 aaKnown RBP17.29■□□□□ 0.36
CAPNS1-213ENST00000592354 DPF2Q92785 391 aa17.29■□□□□ 0.36
CAPNS1-213ENST00000592354 WBP1LQ9NX94 342 aa17.29■□□□□ 0.36
CAPNS1-213ENST00000592354 PGAP2Q9UHJ9 254 aa17.29■□□□□ 0.36
CAPNS1-213ENST00000592354 POLR2AP24928 1970 aaKnown RBP17.28■□□□□ 0.36
CAPNS1-213ENST00000592354 CTCFP49711 727 aaPredicted RBP17.28■□□□□ 0.36
CAPNS1-213ENST00000592354 DLK2Q6UY11 383 aa17.28■□□□□ 0.36
CAPNS1-213ENST00000592354 TTLL11Q8NHH1 800 aa17.28■□□□□ 0.36
CAPNS1-213ENST00000592354 CDC5LQ99459 802 aaKnown RBP17.28■□□□□ 0.36
CAPNS1-213ENST00000592354 WTIPA6NIX2 430 aaPredicted RBP17.27■□□□□ 0.36
CAPNS1-213ENST00000592354 RPS12P25398 132 aaKnown RBP17.27■□□□□ 0.36
CAPNS1-213ENST00000592354 LBX1P52954 281 aa17.27■□□□□ 0.36
CAPNS1-213ENST00000592354 EXOSC9Q06265 439 aaKnown RBP17.27■□□□□ 0.36
CAPNS1-213ENST00000592354 CDC37L1Q7L3B6 337 aa17.27■□□□□ 0.36
CAPNS1-213ENST00000592354 USP48Q86UV5 1035 aa17.27■□□□□ 0.36
CAPNS1-213ENST00000592354 AOC2O75106 756 aa17.26■□□□□ 0.35
CAPNS1-213ENST00000592354 ECE1P42892 770 aa17.26■□□□□ 0.35
CAPNS1-213ENST00000592354 KIF4BQ2VIQ3 1234 aa17.26■□□□□ 0.35
CAPNS1-213ENST00000592354 SAPCD2Q86UD0 394 aa17.26■□□□□ 0.35
CAPNS1-213ENST00000592354 FAM9BQ8IZU0 186 aa17.26■□□□□ 0.35
CAPNS1-213ENST00000592354 ASTN2O75129 1339 aaPredicted RBP17.25■□□□□ 0.35
CAPNS1-213ENST00000592354 ADM5C9JUS6 153 aa17.25■□□□□ 0.35
CAPNS1-213ENST00000592354 H7C1W4 665 aa17.25■□□□□ 0.35
CAPNS1-213ENST00000592354 HSPA8P11142 646 aaKnown RBP17.25■□□□□ 0.35
CAPNS1-213ENST00000592354 MAP2K1Q02750 393 aaPredicted RBP17.25■□□□□ 0.35
CAPNS1-213ENST00000592354 GCKRQ14397 625 aa17.25■□□□□ 0.35
CAPNS1-213ENST00000592354 FAM161AQ3B820 660 aa17.25■□□□□ 0.35
CAPNS1-213ENST00000592354 NCBP3Q53F19 620 aaKnown RBP17.25■□□□□ 0.35
CAPNS1-213ENST00000592354 KRT26Q7Z3Y9 468 aa17.25■□□□□ 0.35
CAPNS1-213ENST00000592354 WDR63Q8IWG1 891 aa17.25■□□□□ 0.35
CAPNS1-213ENST00000592354 DNAAF4Q8WXU2 420 aa17.25■□□□□ 0.35
CAPNS1-213ENST00000592354 SPINK5Q9NQ38 1064 aaPredicted RBP17.25■□□□□ 0.35
CAPNS1-213ENST00000592354 MED23Q9ULK4 1368 aa17.25■□□□□ 0.35
CAPNS1-213ENST00000592354 ZNF609O15014 1411 aa17.24■□□□□ 0.35
CAPNS1-213ENST00000592354 VAMP4O75379 141 aa17.24■□□□□ 0.35
CAPNS1-213ENST00000592354 VIL1P09327 827 aaKnown RBP17.24■□□□□ 0.35
CAPNS1-213ENST00000592354 ATP2B4P23634 1241 aa17.24■□□□□ 0.35
CAPNS1-213ENST00000592354 MYH16Q9H6N6 1097 aa17.24■□□□□ 0.35
CAPNS1-213ENST00000592354 PRDM10Q9NQV6 1147 aa17.24■□□□□ 0.35
CAPNS1-213ENST00000592354 GGA3Q9NZ52 723 aa17.24■□□□□ 0.35
CAPNS1-213ENST00000592354 MINPP1Q9UNW1 487 aa17.24■□□□□ 0.35
CAPNS1-213ENST00000592354 F6X3S4 739 aa17.23■□□□□ 0.35
CAPNS1-213ENST00000592354 RSBN1LQ6PCB5 846 aaPredicted RBP17.23■□□□□ 0.35
CAPNS1-213ENST00000592354 BSDC1Q9NW68 430 aaPredicted RBP17.23■□□□□ 0.35
CAPNS1-213ENST00000592354 ITGA6P23229 1130 aa17.22■□□□□ 0.35
CAPNS1-213ENST00000592354 IGHMBP2P38935 993 aaKnown RBP17.22■□□□□ 0.35
CAPNS1-213ENST00000592354 CCT4P50991 539 aaKnown RBP17.22■□□□□ 0.35
CAPNS1-213ENST00000592354 CASP7P55210 303 aa17.22■□□□□ 0.35
CAPNS1-213ENST00000592354 LINS1Q8NG48 757 aa17.22■□□□□ 0.35
CAPNS1-213ENST00000592354 DCPSQ96C86 337 aaKnown RBP17.22■□□□□ 0.35
CAPNS1-213ENST00000592354 TSKSQ9UJT2 592 aa17.22■□□□□ 0.35
CAPNS1-213ENST00000592354 FBXW7Q969H0 707 aa17.21■□□□□ 0.35
CAPNS1-213ENST00000592354 PLA2G12BQ9BX93 195 aa17.21■□□□□ 0.35
CAPNS1-213ENST00000592354 USP17L3A6NCW0 530 aa17.2■□□□□ 0.34
CAPNS1-213ENST00000592354 USP17L4A6NCW7 530 aa17.2■□□□□ 0.34
CAPNS1-213ENST00000592354 KLRK1P26718 216 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms