RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 C6orf229H3BNL8 230 aa25.9■■□□□ 1.74
DNMT1-227ENST00000592342 SRGAP3O43295 1099 aa25.9■■□□□ 1.74
DNMT1-227ENST00000592342 ANKRD2Q9GZV1 360 aa25.9■■□□□ 1.74
DNMT1-227ENST00000592342 LRRC37AA6NMS7 1700 aa25.89■■□□□ 1.74
DNMT1-227ENST00000592342 IARSP41252 1262 aaKnown RBP25.89■■□□□ 1.74
DNMT1-227ENST00000592342 RTFDC1Q9BY42 306 aaPredicted RBP25.89■■□□□ 1.74
DNMT1-227ENST00000592342 PODXL2Q9NZ53 605 aa25.89■■□□□ 1.74
DNMT1-227ENST00000592342 GGA1Q9UJY5 639 aa25.89■■□□□ 1.74
DNMT1-227ENST00000592342 SUPT16HQ9Y5B9 1047 aaKnown RBP25.89■■□□□ 1.74
DNMT1-227ENST00000592342 GOLGB1Q14789 3259 aaKnown RBP25.89■■□□□ 1.73
DNMT1-227ENST00000592342 UFL1O94874 794 aa25.88■■□□□ 1.73
DNMT1-227ENST00000592342 CHRNDQ07001 517 aa25.88■■□□□ 1.73
DNMT1-227ENST00000592342 MTX1Q13505 466 aa25.88■■□□□ 1.73
DNMT1-227ENST00000592342 KLHDC4Q8TBB5 520 aa25.88■■□□□ 1.73
DNMT1-227ENST00000592342 SPEF2Q9C093 1822 aa25.88■■□□□ 1.73
DNMT1-227ENST00000592342 PPIP5K2O43314 1243 aa25.87■■□□□ 1.73
DNMT1-227ENST00000592342 ATP2B4P23634 1241 aa25.87■■□□□ 1.73
DNMT1-227ENST00000592342 PRELPP51888 382 aa25.87■■□□□ 1.73
DNMT1-227ENST00000592342 EYA3Q99504 573 aa25.87■■□□□ 1.73
DNMT1-227ENST00000592342 KCNJ4P48050 445 aa25.86■■□□□ 1.73
DNMT1-227ENST00000592342 RFX5P48382 616 aaPredicted RBP25.86■■□□□ 1.73
DNMT1-227ENST00000592342 LARGE2Q8N3Y3 721 aa25.86■■□□□ 1.73
DNMT1-227ENST00000592342 TBC1D16Q8TBP0 767 aa25.86■■□□□ 1.73
DNMT1-227ENST00000592342 PUS3Q9BZE2 481 aaKnown RBP25.86■■□□□ 1.73
DNMT1-227ENST00000592342 CHD4Q14839 1912 aa25.85■■□□□ 1.73
DNMT1-227ENST00000592342 YY1P25490 414 aa25.85■■□□□ 1.73
DNMT1-227ENST00000592342 PTPN12Q05209 780 aaKnown RBP25.85■■□□□ 1.73
DNMT1-227ENST00000592342 AOC3Q16853 763 aa25.85■■□□□ 1.73
DNMT1-227ENST00000592342 WASHC4Q2M389 1173 aa25.85■■□□□ 1.73
DNMT1-227ENST00000592342 JDP2Q8WYK2 163 aa25.85■■□□□ 1.73
DNMT1-227ENST00000592342 VPS33BQ9H267 617 aa25.85■■□□□ 1.73
DNMT1-227ENST00000592342 ZBTB40Q9NUA8 1239 aa25.85■■□□□ 1.73
DNMT1-227ENST00000592342 POLLQ9UGP5 575 aa25.85■■□□□ 1.73
DNMT1-227ENST00000592342 ATP8B2P98198 1209 aa25.84■■□□□ 1.73
DNMT1-227ENST00000592342 HELBQ8NG08 1087 aaPredicted RBP25.84■■□□□ 1.73
DNMT1-227ENST00000592342 SIL1Q9H173 461 aa25.84■■□□□ 1.73
DNMT1-227ENST00000592342 MROH5Q6ZUA9 1318 aa25.84■■□□□ 1.73
DNMT1-227ENST00000592342 PNMA6EA0A0J9YXQ4 647 aa25.83■■□□□ 1.73
DNMT1-227ENST00000592342 EYA2O00167 538 aa25.83■■□□□ 1.73
DNMT1-227ENST00000592342 RIMBP2O15034 1052 aa25.83■■□□□ 1.73
DNMT1-227ENST00000592342 TAF5LO75529 589 aa25.83■■□□□ 1.73
DNMT1-227ENST00000592342 LRRC24Q50LG9 513 aa25.83■■□□□ 1.73
DNMT1-227ENST00000592342 ZC3H12CQ9C0D7 883 aaKnown RBP25.83■■□□□ 1.73
DNMT1-227ENST00000592342 LEMD3Q9Y2U8 911 aa25.83■■□□□ 1.73
DNMT1-227ENST00000592342 KIAA2012Q0VF49 1180 aa25.82■■□□□ 1.72
DNMT1-227ENST00000592342 METTL24Q5JXM2 366 aa25.82■■□□□ 1.72
DNMT1-227ENST00000592342 NIM1KQ8IY84 436 aa25.82■■□□□ 1.72
DNMT1-227ENST00000592342 COPRSQ9NQ92 184 aa25.82■■□□□ 1.72
DNMT1-227ENST00000592342 FBXO3Q9UK99 471 aa25.82■■□□□ 1.72
DNMT1-227ENST00000592342 PA2G4Q9UQ80 394 aaKnown RBP25.82■■□□□ 1.72
DNMT1-227ENST00000592342 RIPOR2Q9Y4F9 1068 aa25.82■■□□□ 1.72
DNMT1-227ENST00000592342 G3V3G9 751 aa25.81■■□□□ 1.72
DNMT1-227ENST00000592342 DCAF8Q5TAQ9 597 aa25.81■■□□□ 1.72
DNMT1-227ENST00000592342 CEP85Q6P2H3 762 aa25.81■■□□□ 1.72
DNMT1-227ENST00000592342 GPR101Q96P66 508 aaPredicted RBP25.81■■□□□ 1.72
DNMT1-227ENST00000592342 ZNF804BA4D1E1 1349 aa25.81■■□□□ 1.72
DNMT1-227ENST00000592342 DUOX1Q9NRD9 1551 aa25.81■■□□□ 1.72
DNMT1-227ENST00000592342 SBF1O95248 1867 aa25.81■■□□□ 1.72
DNMT1-227ENST00000592342 CRBNQ96SW2 442 aa25.8■■□□□ 1.72
DNMT1-227ENST00000592342 ZC3H4Q9UPT8 1303 aaKnown RBP25.8■■□□□ 1.72
DNMT1-227ENST00000592342 CIAO1O76071 339 aa25.79■■□□□ 1.72
DNMT1-227ENST00000592342 RPAP2Q8IXW5 612 aaPredicted RBP25.79■■□□□ 1.72
DNMT1-227ENST00000592342 IL15P40933 162 aaPredicted RBP25.78■■□□□ 1.72
DNMT1-227ENST00000592342 POLA2Q14181 598 aa25.78■■□□□ 1.72
DNMT1-227ENST00000592342 SSH3Q8TE77 659 aa25.78■■□□□ 1.72
DNMT1-227ENST00000592342 CCDC88AQ3V6T2 1871 aa25.78■■□□□ 1.72
DNMT1-227ENST00000592342 LTBP1Q14766 1721 aa25.77■■□□□ 1.72
DNMT1-227ENST00000592342 HMMRO75330 724 aa25.77■■□□□ 1.72
DNMT1-227ENST00000592342 G3BP1Q13283 466 aaKnown RBP eCLIP25.77■■□□□ 1.72
DNMT1-227ENST00000592342 UTRNP46939 3433 aa25.76■■□□□ 1.71
DNMT1-227ENST00000592342 EIF6P56537 245 aaKnown RBP25.76■■□□□ 1.71
DNMT1-227ENST00000592342 OS9Q13438 667 aaPredicted RBP25.76■■□□□ 1.71
DNMT1-227ENST00000592342 DPY19L2Q6NUT2 758 aa25.76■■□□□ 1.71
DNMT1-227ENST00000592342 ATG9AQ7Z3C6 839 aa25.76■■□□□ 1.71
DNMT1-227ENST00000592342 CEP126Q9P2H0 1117 aa25.76■■□□□ 1.71
DNMT1-227ENST00000592342 MED23Q9ULK4 1368 aa25.76■■□□□ 1.71
DNMT1-227ENST00000592342 WTIPA6NIX2 430 aaPredicted RBP25.75■■□□□ 1.71
DNMT1-227ENST00000592342 PDE8BO95263 885 aa25.75■■□□□ 1.71
DNMT1-227ENST00000592342 UBE4AQ14139 1066 aa25.75■■□□□ 1.71
DNMT1-227ENST00000592342 DOK7Q18PE1 504 aa25.75■■□□□ 1.71
DNMT1-227ENST00000592342 DBNDD1Q9H9R9 158 aa25.75■■□□□ 1.71
DNMT1-227ENST00000592342 SNAP23O00161 211 aa25.74■■□□□ 1.71
DNMT1-227ENST00000592342 SURF6O75683 361 aaKnown RBP25.74■■□□□ 1.71
DNMT1-227ENST00000592342 CENPBP07199 599 aaPredicted RBP25.74■■□□□ 1.71
DNMT1-227ENST00000592342 ZNRF3Q9ULT6 936 aa25.74■■□□□ 1.71
DNMT1-227ENST00000592342 TIAM2Q8IVF5 1701 aa25.74■■□□□ 1.71
DNMT1-227ENST00000592342 DICER1Q9UPY3 1922 aaKnown RBP25.73■■□□□ 1.71
DNMT1-227ENST00000592342 FZD9O00144 591 aa25.73■■□□□ 1.71
DNMT1-227ENST00000592342 ECE2O60344 883 aa25.72■■□□□ 1.71
DNMT1-227ENST00000592342 PUM3Q15397 648 aaKnown RBP25.72■■□□□ 1.71
DNMT1-227ENST00000592342 ZNF526Q8TF50 670 aaPredicted RBP25.72■■□□□ 1.71
DNMT1-227ENST00000592342 COL4A5P29400 1685 aa25.71■■□□□ 1.71
DNMT1-227ENST00000592342 KLRK1P26718 216 aa25.71■■□□□ 1.71
DNMT1-227ENST00000592342 VGLL2Q8N8G2 317 aa25.71■■□□□ 1.71
DNMT1-227ENST00000592342 KDM2BQ8NHM5 1336 aa25.7■■□□□ 1.71
DNMT1-227ENST00000592342 GLTPD2A6NH11 291 aa25.7■■□□□ 1.7
DNMT1-227ENST00000592342 IFIT1P09914 478 aaKnown RBP25.7■■□□□ 1.7
DNMT1-227ENST00000592342 ZNF804AQ7Z570 1209 aa25.7■■□□□ 1.7
DNMT1-227ENST00000592342 TXNRD3Q86VQ6 643 aa25.7■■□□□ 1.7
DNMT1-227ENST00000592342 COA1Q9GZY4 146 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms