RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 TCP11L2Q8N4U5 519 aa8.01□□□□□ -1.13
DNMT1-220ENST00000589351 GTPBP3Q969Y2 492 aaKnown RBP8.01□□□□□ -1.13
DNMT1-220ENST00000589351 ADGRB1O14514 1584 aa8.01□□□□□ -1.13
DNMT1-220ENST00000589351 KRBA1A5PL33 1030 aa8□□□□□ -1.13
DNMT1-220ENST00000589351 SRPK2P78362 688 aaKnown RBP8□□□□□ -1.13
DNMT1-220ENST00000589351 SPON1Q9HCB6 807 aa8□□□□□ -1.13
DNMT1-220ENST00000589351 GPSM3Q9Y4H4 160 aa8□□□□□ -1.13
DNMT1-220ENST00000589351 BRD4O60885 1362 aaPredicted RBP7.99□□□□□ -1.13
DNMT1-220ENST00000589351 GCP02774 474 aa7.99□□□□□ -1.13
DNMT1-220ENST00000589351 SNRPNP63162 240 aaKnown RBP7.99□□□□□ -1.13
DNMT1-220ENST00000589351 CYLDQ9NQC7 956 aa7.99□□□□□ -1.13
DNMT1-220ENST00000589351 THSD7AQ9UPZ6 1657 aa7.98□□□□□ -1.13
DNMT1-220ENST00000589351 POLR3AO14802 1390 aaPredicted RBP7.98□□□□□ -1.13
DNMT1-220ENST00000589351 SSH2Q76I76 1423 aa7.98□□□□□ -1.13
DNMT1-220ENST00000589351 ZBTB7CA1YPR0 619 aa7.98□□□□□ -1.13
DNMT1-220ENST00000589351 ESPNB1AK53 854 aa7.98□□□□□ -1.13
DNMT1-220ENST00000589351 OIP5O43482 229 aa7.98□□□□□ -1.13
DNMT1-220ENST00000589351 KCNQ2O43526 872 aa7.98□□□□□ -1.13
DNMT1-220ENST00000589351 FURINP09958 794 aa7.98□□□□□ -1.13
DNMT1-220ENST00000589351 YY1P25490 414 aa7.98□□□□□ -1.13
DNMT1-220ENST00000589351 LARP1Q6PKG0 1096 aaKnown RBP7.98□□□□□ -1.13
DNMT1-220ENST00000589351 DZIP3Q86Y13 1208 aaKnown RBP7.98□□□□□ -1.13
DNMT1-220ENST00000589351 RSPH6AQ9H0K4 717 aa7.98□□□□□ -1.13
DNMT1-220ENST00000589351 LRRC4BQ9NT99 713 aa7.98□□□□□ -1.13
DNMT1-220ENST00000589351 DYRK1BQ9Y463 629 aa7.98□□□□□ -1.13
DNMT1-220ENST00000589351 CPDO75976 1380 aa7.97□□□□□ -1.13
DNMT1-220ENST00000589351 MX2P20592 715 aa7.97□□□□□ -1.13
DNMT1-220ENST00000589351 DDB1Q16531 1140 aa7.97□□□□□ -1.13
DNMT1-220ENST00000589351 TRERF1Q96PN7 1200 aa7.97□□□□□ -1.13
DNMT1-220ENST00000589351 GAS2L1Q99501 681 aaPredicted RBP7.97□□□□□ -1.13
DNMT1-220ENST00000589351 CDCA7Q9BWT1 371 aaPredicted RBP7.97□□□□□ -1.13
DNMT1-220ENST00000589351 TNS1Q9HBL0 1735 aaKnown RBP7.96□□□□□ -1.14
DNMT1-220ENST00000589351 CRYBG1Q9Y4K1 1723 aa7.96□□□□□ -1.14
DNMT1-220ENST00000589351 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.96□□□□□ -1.14
DNMT1-220ENST00000589351 H7C1W4 665 aa7.96□□□□□ -1.14
DNMT1-220ENST00000589351 MEN1O00255 615 aa7.96□□□□□ -1.14
DNMT1-220ENST00000589351 PLSCR1O15162 318 aa7.96□□□□□ -1.14
DNMT1-220ENST00000589351 POU4F2Q12837 409 aa7.96□□□□□ -1.14
DNMT1-220ENST00000589351 TOM1L2Q6ZVM7 507 aa7.96□□□□□ -1.14
DNMT1-220ENST00000589351 EPS8L1Q8TE68 723 aa7.96□□□□□ -1.14
DNMT1-220ENST00000589351 PSMG3-AS1Q96PY0 264 aa7.96□□□□□ -1.14
DNMT1-220ENST00000589351 CENPJQ9HC77 1338 aaPredicted RBP7.96□□□□□ -1.14
DNMT1-220ENST00000589351 PHRF1Q9P1Y6 1649 aaKnown RBP7.96□□□□□ -1.14
DNMT1-220ENST00000589351 GPC1P35052 558 aa7.95□□□□□ -1.14
DNMT1-220ENST00000589351 PPP2R2DQ66LE6 453 aa7.95□□□□□ -1.14
DNMT1-220ENST00000589351 KRTAP9-2Q9BYQ4 174 aa7.95□□□□□ -1.14
DNMT1-220ENST00000589351 USP19O94966 1318 aa7.95□□□□□ -1.14
DNMT1-220ENST00000589351 CAMTA1Q9Y6Y1 1673 aa7.95□□□□□ -1.14
DNMT1-220ENST00000589351 ARHGEF28Q8N1W1 1705 aaKnown RBP7.95□□□□□ -1.14
DNMT1-220ENST00000589351 OVOS2A0A0G2JMS6 1433 aa7.95□□□□□ -1.14
DNMT1-220ENST00000589351 OVOS2A0A0J9YW53 1432 aa7.95□□□□□ -1.14
DNMT1-220ENST00000589351 CRB1P82279 1406 aa7.95□□□□□ -1.14
DNMT1-220ENST00000589351 OVOS2Q6IE36 1432 aa7.95□□□□□ -1.14
DNMT1-220ENST00000589351 PPIP5K1Q6PFW1 1433 aa7.95□□□□□ -1.14
DNMT1-220ENST00000589351 SHISA8B8ZZ34 492 aa7.94□□□□□ -1.14
DNMT1-220ENST00000589351 ATP5J2-PTCD1G3V325 749 aa7.94□□□□□ -1.14
DNMT1-220ENST00000589351 COL8A1P27658 744 aa7.94□□□□□ -1.14
DNMT1-220ENST00000589351 KCNH5Q8NCM2 988 aa7.94□□□□□ -1.14
DNMT1-220ENST00000589351 CABP1Q9NZU7 370 aa7.94□□□□□ -1.14
DNMT1-220ENST00000589351 NSFL1CQ9UNZ2 370 aaKnown RBP7.94□□□□□ -1.14
DNMT1-220ENST00000589351 AATKQ6ZMQ8 1374 aa7.94□□□□□ -1.14
DNMT1-220ENST00000589351 A0A1W2PRU2 124 aa7.93□□□□□ -1.14
DNMT1-220ENST00000589351 EXOC5O00471 708 aa7.93□□□□□ -1.14
DNMT1-220ENST00000589351 CSB-PGBD3P0DP91 1061 aa7.93□□□□□ -1.14
DNMT1-220ENST00000589351 NBPF1Q3BBV0 1214 aa7.93□□□□□ -1.14
DNMT1-220ENST00000589351 OXCT2Q9BYC2 517 aaPredicted RBP7.93□□□□□ -1.14
DNMT1-220ENST00000589351 EVC2Q86UK5 1308 aa7.93□□□□□ -1.14
DNMT1-220ENST00000589351 NINLQ9Y2I6 1382 aa7.93□□□□□ -1.14
DNMT1-220ENST00000589351 KIAA1210Q9ULL0 1709 aa7.92□□□□□ -1.14
DNMT1-220ENST00000589351 C1orf229Q6ZS94 237 aaPredicted RBP7.92□□□□□ -1.14
DNMT1-220ENST00000589351 STK32BQ9NY57 414 aa7.92□□□□□ -1.14
DNMT1-220ENST00000589351 MKL2Q9ULH7 1088 aa7.92□□□□□ -1.14
DNMT1-220ENST00000589351 WDR17Q8IZU2 1322 aa7.92□□□□□ -1.14
DNMT1-220ENST00000589351 COL5A2P05997 1499 aaPredicted RBP7.92□□□□□ -1.14
DNMT1-220ENST00000589351 NRKQ7Z2Y5 1582 aa7.92□□□□□ -1.14
DNMT1-220ENST00000589351 RREB1Q92766 1687 aa7.92□□□□□ -1.14
DNMT1-220ENST00000589351 PARP4Q9UKK3 1724 aaKnown RBP7.92□□□□□ -1.14
DNMT1-220ENST00000589351 KRTAP9-6A0A140TA67 174 aa7.91□□□□□ -1.14
DNMT1-220ENST00000589351 SLC27A3Q5K4L6 730 aa7.91□□□□□ -1.14
DNMT1-220ENST00000589351 NBPF10Q6P3W6 841 aaKnown RBP7.91□□□□□ -1.14
DNMT1-220ENST00000589351 NBPF15Q8N660 670 aa7.91□□□□□ -1.14
DNMT1-220ENST00000589351 GRIP2Q9C0E4 1043 aa7.91□□□□□ -1.14
DNMT1-220ENST00000589351 NUCKS1Q9H1E3 243 aaKnown RBP7.91□□□□□ -1.14
DNMT1-220ENST00000589351 HMX1Q9NP08 348 aaPredicted RBP7.91□□□□□ -1.14
DNMT1-220ENST00000589351 NUP188Q5SRE5 1749 aa7.9□□□□□ -1.14
DNMT1-220ENST00000589351 TOPAZ1Q8N9V7 1692 aa7.9□□□□□ -1.14
DNMT1-220ENST00000589351 LMO7Q8WWI1 1683 aa7.9□□□□□ -1.14
DNMT1-220ENST00000589351 USP6P35125 1406 aa7.9□□□□□ -1.14
DNMT1-220ENST00000589351 TTC21AQ8NDW8 1320 aa7.9□□□□□ -1.14
DNMT1-220ENST00000589351 AP1G2O75843 785 aa7.9□□□□□ -1.14
DNMT1-220ENST00000589351 MAP2K3P46734 347 aa7.9□□□□□ -1.14
DNMT1-220ENST00000589351 ARHGEF25Q86VW2 580 aa7.9□□□□□ -1.14
DNMT1-220ENST00000589351 PROCA1Q8NCQ7 364 aaPredicted RBP7.9□□□□□ -1.14
DNMT1-220ENST00000589351 CARD10Q9BWT7 1032 aa7.9□□□□□ -1.14
DNMT1-220ENST00000589351 TTC21BQ7Z4L5 1316 aa7.89□□□□□ -1.15
DNMT1-220ENST00000589351 GIGYF1O75420 1035 aaPredicted RBP7.89□□□□□ -1.15
DNMT1-220ENST00000589351 THBS1P07996 1170 aa7.89□□□□□ -1.15
DNMT1-220ENST00000589351 SLC15A2Q16348 729 aa7.89□□□□□ -1.15
DNMT1-220ENST00000589351 TXNRD1Q16881 649 aa7.89□□□□□ -1.15
DNMT1-220ENST00000589351 ALYREFQ86V81 257 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms