RNA–Protein interactions for RNA: ENST00000589266.5

CIRBP-223, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-223	ENST00000589266	GTF2E1	P29083	439 aa	Predicted RBP	31.32	■■■□□ 2.6
CIRBP-223	ENST00000589266	CNTROB	Q8N137	903 aa		31.32	■■■□□ 2.6
CIRBP-223	ENST00000589266	LRRFIP2	Q9Y608	721 aa	Known RBP	31.32	■■■□□ 2.6
CIRBP-223	ENST00000589266	LAMB2	P55268	1798 aa		31.31	■■■□□ 2.6
CIRBP-223	ENST00000589266	RPAP2	Q8IXW5	612 aa	Predicted RBP	31.31	■■■□□ 2.6
CIRBP-223	ENST00000589266	SUCLG2	Q96I99	432 aa		31.31	■■■□□ 2.6
CIRBP-223	ENST00000589266	FAM177B	A6PVY3	158 aa		31.3	■■■□□ 2.6
CIRBP-223	ENST00000589266	KAZALD1	Q96I82	304 aa		31.3	■■■□□ 2.6
CIRBP-223	ENST00000589266	PDE8A	O60658	829 aa		31.29	■■■□□ 2.6
CIRBP-223	ENST00000589266	MAP2K1	Q02750	393 aa	Predicted RBP	31.29	■■■□□ 2.6
CIRBP-223	ENST00000589266	MAP1S	Q66K74	1059 aa	Predicted RBP	31.29	■■■□□ 2.6
CIRBP-223	ENST00000589266	ADAMTSL1	Q8N6G6	1762 aa		31.29	■■■□□ 2.6
CIRBP-223	ENST00000589266	FZD9	O00144	591 aa		31.28	■■■□□ 2.6
CIRBP-223	ENST00000589266	HSPA8	P11142	646 aa	Known RBP	31.28	■■■□□ 2.6
CIRBP-223	ENST00000589266	IARS	P41252	1262 aa	Known RBP	31.28	■■■□□ 2.6
CIRBP-223	ENST00000589266	MTX1	Q13505	466 aa		31.28	■■■□□ 2.6
CIRBP-223	ENST00000589266	RABL6	Q3YEC7	729 aa	Predicted RBP	31.28	■■■□□ 2.6
CIRBP-223	ENST00000589266	OLFM4	Q6UX06	510 aa		31.28	■■■□□ 2.6
CIRBP-223	ENST00000589266	NUTM1	Q86Y26	1132 aa		31.28	■■■□□ 2.6
CIRBP-223	ENST00000589266	JARID2	Q92833	1246 aa	Predicted RBP	31.28	■■■□□ 2.6
CIRBP-223	ENST00000589266	WDR33	Q9C0J8	1336 aa	Known RBP	31.27	■■■□□ 2.6
CIRBP-223	ENST00000589266	ALDH1B1	P30837	517 aa		31.27	■■■□□ 2.6
CIRBP-223	ENST00000589266	RTL5	Q5HYW3	569 aa	Predicted RBP	31.27	■■■□□ 2.6
CIRBP-223	ENST00000589266	SYNE4	Q8N205	404 aa		31.27	■■■□□ 2.6
CIRBP-223	ENST00000589266	ABHD8	Q96I13	439 aa		31.27	■■■□□ 2.6
CIRBP-223	ENST00000589266	DDX60	Q8IY21	1712 aa	Known RBP	31.27	■■■□□ 2.6
CIRBP-223	ENST00000589266	FOXO4	P98177	505 aa		31.26	■■■□□ 2.59
CIRBP-223	ENST00000589266	GPC2	Q8N158	579 aa		31.26	■■■□□ 2.59
CIRBP-223	ENST00000589266	C1orf115	Q9H7X2	142 aa		31.26	■■■□□ 2.59
CIRBP-223	ENST00000589266	ABT1	Q9ULW3	272 aa	Known RBP	31.26	■■■□□ 2.59
CIRBP-223	ENST00000589266	MYH3	P11055	1940 aa		31.26	■■■□□ 2.59
CIRBP-223	ENST00000589266	CEP85	Q6P2H3	762 aa		31.25	■■■□□ 2.59
CIRBP-223	ENST00000589266	ANKRD44	Q8N8A2	993 aa		31.25	■■■□□ 2.59
CIRBP-223	ENST00000589266	BICC1	Q9H694	974 aa	Known RBP	31.25	■■■□□ 2.59
CIRBP-223	ENST00000589266	CSF1R	P07333	972 aa		31.24	■■■□□ 2.59
CIRBP-223	ENST00000589266	ATP8B2	P98198	1209 aa		31.24	■■■□□ 2.59
CIRBP-223	ENST00000589266	JDP2	Q8WYK2	163 aa		31.24	■■■□□ 2.59
CIRBP-223	ENST00000589266	PCDHB15	Q9Y5E8	787 aa		31.24	■■■□□ 2.59
CIRBP-223	ENST00000589266	ABCC12	Q96J65	1359 aa		31.24	■■■□□ 2.59
CIRBP-223	ENST00000589266	EPHA10	Q5JZY3	1008 aa		31.23	■■■□□ 2.59
CIRBP-223	ENST00000589266	SLC34A2	O95436	690 aa		31.22	■■■□□ 2.59
CIRBP-223	ENST00000589266	HCLS1	P14317	486 aa	Predicted RBP	31.22	■■■□□ 2.59
CIRBP-223	ENST00000589266	CTSW	P56202	376 aa		31.22	■■■□□ 2.59
CIRBP-223	ENST00000589266	SF3B3	Q15393	1217 aa	Known RBP	31.22	■■■□□ 2.59
CIRBP-223	ENST00000589266	NLRP3	Q96P20	1036 aa		31.22	■■■□□ 2.59
CIRBP-223	ENST00000589266	HMMR	O75330	724 aa		31.21	■■■□□ 2.59
CIRBP-223	ENST00000589266	RTL9	Q8NET4	1388 aa		31.2	■■■□□ 2.59
CIRBP-223	ENST00000589266	LMBR1L	Q6UX01	489 aa		31.2	■■■□□ 2.59
CIRBP-223	ENST00000589266	TTLL11	Q8NHH1	800 aa		31.2	■■■□□ 2.59
CIRBP-223	ENST00000589266	PSMD1	Q99460	953 aa		31.2	■■■□□ 2.59
CIRBP-223	ENST00000589266	PPP4R2	Q9NY27	417 aa		31.2	■■■□□ 2.59
CIRBP-223	ENST00000589266	EIF6	P56537	245 aa	Known RBP	31.19	■■■□□ 2.58
CIRBP-223	ENST00000589266	HDAC1	Q13547	482 aa	Predicted RBP	31.19	■■■□□ 2.58
CIRBP-223	ENST00000589266	FAM161A	Q3B820	660 aa		31.19	■■■□□ 2.58
CIRBP-223	ENST00000589266	CCDC152	Q4G0S7	254 aa		31.18	■■■□□ 2.58
CIRBP-223	ENST00000589266	SSH3	Q8TE77	659 aa		31.18	■■■□□ 2.58
CIRBP-223	ENST00000589266	LMOD1	P29536	600 aa	Predicted RBP	31.17	■■■□□ 2.58
CIRBP-223	ENST00000589266	POLA2	Q14181	598 aa		31.17	■■■□□ 2.58
CIRBP-223	ENST00000589266	BEGAIN	Q9BUH8	593 aa		31.17	■■■□□ 2.58
CIRBP-223	ENST00000589266	GJA3	Q9Y6H8	435 aa		31.17	■■■□□ 2.58
CIRBP-223	ENST00000589266	SRGAP3	O43295	1099 aa		31.16	■■■□□ 2.58
CIRBP-223	ENST00000589266	CC2D2B	Q6DHV5	1058 aa		31.16	■■■□□ 2.58
CIRBP-223	ENST00000589266	SIRT2	Q8IXJ6	389 aa		31.16	■■■□□ 2.58
CIRBP-223	ENST00000589266	RWDD1	Q9H446	243 aa	Predicted RBP	31.16	■■■□□ 2.58
CIRBP-223	ENST00000589266	ECE1	P42892	770 aa		31.15	■■■□□ 2.58
CIRBP-223	ENST00000589266	CRY2	Q49AN0	593 aa		31.15	■■■□□ 2.58
CIRBP-223	ENST00000589266	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	31.14	■■■□□ 2.58
CIRBP-223	ENST00000589266	CAPNS2	Q96L46	248 aa		31.14	■■■□□ 2.58
CIRBP-223	ENST00000589266	PNMA6E	A0A0J9YXQ4	647 aa		31.13	■■■□□ 2.57
CIRBP-223	ENST00000589266	GTF3C3	Q9Y5Q9	886 aa		31.13	■■■□□ 2.57
CIRBP-223	ENST00000589266	IFIT5	Q13325	482 aa	Known RBP	31.12	■■■□□ 2.57
CIRBP-223	ENST00000589266	CCDC57	Q2TAC2	916 aa		31.12	■■■□□ 2.57
CIRBP-223	ENST00000589266	SNED1	Q8TER0	1413 aa		31.12	■■■□□ 2.57
CIRBP-223	ENST00000589266	C3orf67	Q6ZVT6	689 aa		31.11	■■■□□ 2.57
CIRBP-223	ENST00000589266	GPR101	Q96P66	508 aa	Predicted RBP	31.11	■■■□□ 2.57
CIRBP-223	ENST00000589266	GREM2	Q9H772	168 aa		31.11	■■■□□ 2.57
CIRBP-223	ENST00000589266	CHMP3	Q9Y3E7	222 aa		31.11	■■■□□ 2.57
CIRBP-223	ENST00000589266	ANKRD18B	A2A2Z9	1011 aa		31.1	■■■□□ 2.57
CIRBP-223	ENST00000589266	CCDC85C	A6NKD9	419 aa		31.1	■■■□□ 2.57
CIRBP-223	ENST00000589266	RFX5	P48382	616 aa	Predicted RBP	31.1	■■■□□ 2.57
CIRBP-223	ENST00000589266	GRIPAP1	Q4V328	841 aa		31.1	■■■□□ 2.57
CIRBP-223	ENST00000589266	COPRS	Q9NQ92	184 aa		31.1	■■■□□ 2.57
CIRBP-223	ENST00000589266	HOXA10	P31260	410 aa	Predicted RBP	31.09	■■■□□ 2.57
CIRBP-223	ENST00000589266	EPS15	P42566	896 aa		31.09	■■■□□ 2.57
CIRBP-223	ENST00000589266	GRM1	Q13255	1194 aa		31.09	■■■□□ 2.57
CIRBP-223	ENST00000589266	CYP4F22	Q6NT55	531 aa		31.09	■■■□□ 2.57
CIRBP-223	ENST00000589266	LARGE2	Q8N3Y3	721 aa		31.09	■■■□□ 2.57
CIRBP-223	ENST00000589266	CCDC136	Q96JN2	1154 aa		31.09	■■■□□ 2.57
CIRBP-223	ENST00000589266	FBXO3	Q9UK99	471 aa		31.09	■■■□□ 2.57
CIRBP-223	ENST00000589266	ITGA6	P23229	1130 aa		31.08	■■■□□ 2.57
CIRBP-223	ENST00000589266	SCNN1D	P51172	638 aa		31.08	■■■□□ 2.57
CIRBP-223	ENST00000589266	MLLT1	Q03111	559 aa	Predicted RBP	31.08	■■■□□ 2.57
CIRBP-223	ENST00000589266	FMR1	Q06787	632 aa	Known RBP eCLIP	31.08	■■■□□ 2.57
CIRBP-223	ENST00000589266	USP50	Q70EL3	339 aa	Predicted RBP	31.08	■■■□□ 2.57
CIRBP-223	ENST00000589266	RPGR	Q92834	1020 aa	Known RBP	31.08	■■■□□ 2.57
CIRBP-223	ENST00000589266	LTBP1	Q14766	1721 aa		31.07	■■■□□ 2.56
CIRBP-223	ENST00000589266	CDC5L	Q99459	802 aa	Known RBP	31.07	■■■□□ 2.56
CIRBP-223	ENST00000589266	NOP58	Q9Y2X3	529 aa	Known RBP	31.07	■■■□□ 2.56
CIRBP-223	ENST00000589266	TRPM7	Q96QT4	1865 aa		31.07	■■■□□ 2.56
CIRBP-223	ENST00000589266	THSD7B	Q9C0I4	1608 aa		31.06	■■■□□ 2.56

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