RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 SUCLG2Q96I99 432 aa20.25■□□□□ 0.83
RETREG3-206ENST00000588423 ANKIB1Q9P2G1 1089 aa20.25■□□□□ 0.83
RETREG3-206ENST00000588423 GGA1Q9UJY5 639 aa20.25■□□□□ 0.83
RETREG3-206ENST00000588423 ZNRF3Q9ULT6 936 aa20.25■□□□□ 0.83
RETREG3-206ENST00000588423 MINPP1Q9UNW1 487 aa20.25■□□□□ 0.83
RETREG3-206ENST00000588423 IQCA1LA6NCM1 817 aa20.24■□□□□ 0.83
RETREG3-206ENST00000588423 C6orf229H3BNL8 230 aa20.24■□□□□ 0.83
RETREG3-206ENST00000588423 RBM46Q8TBY0 533 aaKnown RBP20.24■□□□□ 0.83
RETREG3-206ENST00000588423 USP44Q9H0E7 712 aa20.24■□□□□ 0.83
RETREG3-206ENST00000588423 ATP2B4P23634 1241 aa20.23■□□□□ 0.83
RETREG3-206ENST00000588423 KAZALD1Q96I82 304 aa20.23■□□□□ 0.83
RETREG3-206ENST00000588423 MPHOSPH8Q99549 860 aa20.23■□□□□ 0.83
RETREG3-206ENST00000588423 BCAR3O75815 825 aa20.22■□□□□ 0.83
RETREG3-206ENST00000588423 UFL1O94874 794 aa20.22■□□□□ 0.83
RETREG3-206ENST00000588423 CCDC57Q2TAC2 916 aa20.22■□□□□ 0.83
RETREG3-206ENST00000588423 RABL6Q3YEC7 729 aaPredicted RBP20.22■□□□□ 0.83
RETREG3-206ENST00000588423 CHMP3Q9Y3E7 222 aa20.22■□□□□ 0.83
RETREG3-206ENST00000588423 ZC3H12CQ9C0D7 883 aaKnown RBP20.21■□□□□ 0.83
RETREG3-206ENST00000588423 ANKRD2Q9GZV1 360 aa20.21■□□□□ 0.83
RETREG3-206ENST00000588423 INTS3Q68E01 1043 aaKnown RBP20.2■□□□□ 0.82
RETREG3-206ENST00000588423 ATF7IPQ6VMQ6 1270 aa20.2■□□□□ 0.82
RETREG3-206ENST00000588423 BICC1Q9H694 974 aaKnown RBP20.2■□□□□ 0.82
RETREG3-206ENST00000588423 SCN4AP35499 1836 aa20.2■□□□□ 0.82
RETREG3-206ENST00000588423 TRIM27P14373 513 aa20.19■□□□□ 0.82
RETREG3-206ENST00000588423 CXCL9Q07325 125 aa20.19■□□□□ 0.82
RETREG3-206ENST00000588423 FSTL1Q12841 308 aa20.19■□□□□ 0.82
RETREG3-206ENST00000588423 TNIP1Q15025 636 aa20.19■□□□□ 0.82
RETREG3-206ENST00000588423 HDAC5Q9UQL6 1122 aa20.19■□□□□ 0.82
RETREG3-206ENST00000588423 LEMD3Q9Y2U8 911 aa20.19■□□□□ 0.82
RETREG3-206ENST00000588423 SPEF2Q9C093 1822 aa20.18■□□□□ 0.82
RETREG3-206ENST00000588423 YDJCA8MPS7 323 aa20.18■□□□□ 0.82
RETREG3-206ENST00000588423 RIMBP2O15034 1052 aa20.18■□□□□ 0.82
RETREG3-206ENST00000588423 CIAPIN1Q6FI81 312 aa20.18■□□□□ 0.82
RETREG3-206ENST00000588423 ANKRD44Q8N8A2 993 aa20.18■□□□□ 0.82
RETREG3-206ENST00000588423 FRAT1Q92837 279 aaPredicted RBP20.18■□□□□ 0.82
RETREG3-206ENST00000588423 TAF1DQ9H5J8 278 aaPredicted RBP20.18■□□□□ 0.82
RETREG3-206ENST00000588423 HACL1Q9UJ83 578 aa20.18■□□□□ 0.82
RETREG3-206ENST00000588423 GJA3Q9Y6H8 435 aa20.18■□□□□ 0.82
RETREG3-206ENST00000588423 MED23Q9ULK4 1368 aa20.18■□□□□ 0.82
RETREG3-206ENST00000588423 CHRNDQ07001 517 aa20.17■□□□□ 0.82
RETREG3-206ENST00000588423 TAF7LQ5H9L4 462 aa20.17■□□□□ 0.82
RETREG3-206ENST00000588423 ZKSCAN2Q63HK3 967 aa20.17■□□□□ 0.82
RETREG3-206ENST00000588423 SMC1BQ8NDV3 1235 aa20.17■□□□□ 0.82
RETREG3-206ENST00000588423 GPR101Q96P66 508 aaPredicted RBP20.17■□□□□ 0.82
RETREG3-206ENST00000588423 DBNDD1Q9H9R9 158 aa20.17■□□□□ 0.82
RETREG3-206ENST00000588423 ECE2O60344 883 aa20.16■□□□□ 0.82
RETREG3-206ENST00000588423 UBTFL1P0CB47 393 aaPredicted RBP20.16■□□□□ 0.82
RETREG3-206ENST00000588423 LDHAL6AQ6ZMR3 332 aa20.16■□□□□ 0.82
RETREG3-206ENST00000588423 RAD17O75943 681 aa20.15■□□□□ 0.82
RETREG3-206ENST00000588423 LMOD1P29536 600 aaPredicted RBP20.15■□□□□ 0.82
RETREG3-206ENST00000588423 EPHX2P34913 555 aa20.15■□□□□ 0.82
RETREG3-206ENST00000588423 SCNN1DP51172 638 aa20.15■□□□□ 0.82
RETREG3-206ENST00000588423 PNMA8AQ86V59 439 aaPredicted RBP20.15■□□□□ 0.82
RETREG3-206ENST00000588423 ZNF804BA4D1E1 1349 aa20.15■□□□□ 0.82
RETREG3-206ENST00000588423 G3V3G9 751 aa20.14■□□□□ 0.81
RETREG3-206ENST00000588423 DOK7Q18PE1 504 aa20.14■□□□□ 0.81
RETREG3-206ENST00000588423 DCAF8Q5TAQ9 597 aa20.14■□□□□ 0.81
RETREG3-206ENST00000588423 ZNF594Q96JF6 807 aaPredicted RBP20.14■□□□□ 0.81
RETREG3-206ENST00000588423 GNAI3P08754 354 aa20.13■□□□□ 0.81
RETREG3-206ENST00000588423 HSPA6P17066 643 aa20.13■□□□□ 0.81
RETREG3-206ENST00000588423 PODNQ7Z5L7 613 aa20.13■□□□□ 0.81
RETREG3-206ENST00000588423 CNNM1Q9NRU3 951 aa20.13■□□□□ 0.81
RETREG3-206ENST00000588423 GPRC5DQ9NZD1 345 aa20.13■□□□□ 0.81
RETREG3-206ENST00000588423 WTIPA6NIX2 430 aaPredicted RBP20.12■□□□□ 0.81
RETREG3-206ENST00000588423 C15orf52Q6ZUT6 534 aaKnown RBP20.12■□□□□ 0.81
RETREG3-206ENST00000588423 LDHDQ86WU2 507 aa20.12■□□□□ 0.81
RETREG3-206ENST00000588423 MEIS3Q99687 375 aa20.12■□□□□ 0.81
RETREG3-206ENST00000588423 ZNF609O15014 1411 aa20.11■□□□□ 0.81
RETREG3-206ENST00000588423 PSMD14O00487 310 aa20.11■□□□□ 0.81
RETREG3-206ENST00000588423 RPS12P25398 132 aaKnown RBP20.11■□□□□ 0.81
RETREG3-206ENST00000588423 KCNJ4P48050 445 aa20.11■□□□□ 0.81
RETREG3-206ENST00000588423 GMPSP49915 693 aaPredicted RBP20.11■□□□□ 0.81
RETREG3-206ENST00000588423 CHADLQ6NUI6 762 aa20.11■□□□□ 0.81
RETREG3-206ENST00000588423 DPF2Q92785 391 aa20.11■□□□□ 0.81
RETREG3-206ENST00000588423 COA1Q9GZY4 146 aa20.11■□□□□ 0.81
RETREG3-206ENST00000588423 TNNQ9UQP3 1299 aa20.11■□□□□ 0.81
RETREG3-206ENST00000588423 RIPOR2Q9Y4F9 1068 aa20.11■□□□□ 0.81
RETREG3-206ENST00000588423 ADAMTSL1Q8N6G6 1762 aa20.11■□□□□ 0.81
RETREG3-206ENST00000588423 MROH5Q6ZUA9 1318 aa20.1■□□□□ 0.81
RETREG3-206ENST00000588423 IRS2Q9Y4H2 1338 aa20.1■□□□□ 0.81
RETREG3-206ENST00000588423 VIL1P09327 827 aaKnown RBP20.1■□□□□ 0.81
RETREG3-206ENST00000588423 EPS15P42566 896 aa20.1■□□□□ 0.81
RETREG3-206ENST00000588423 USP50Q70EL3 339 aaPredicted RBP20.1■□□□□ 0.81
RETREG3-206ENST00000588423 CLUAP1Q96AJ1 413 aa20.1■□□□□ 0.81
RETREG3-206ENST00000588423 ADARB2Q9NS39 739 aaKnown RBP20.1■□□□□ 0.81
RETREG3-206ENST00000588423 A0A1B0GUL6 1792 aa20.1■□□□□ 0.81
RETREG3-206ENST00000588423 TAF5LO75529 589 aa20.09■□□□□ 0.81
RETREG3-206ENST00000588423 POTEIP0CG38 1075 aa20.09■□□□□ 0.81
RETREG3-206ENST00000588423 POTEJP0CG39 1038 aa20.09■□□□□ 0.81
RETREG3-206ENST00000588423 RFX5P48382 616 aaPredicted RBP20.09■□□□□ 0.81
RETREG3-206ENST00000588423 TXNRD3Q86VQ6 643 aa20.09■□□□□ 0.81
RETREG3-206ENST00000588423 DZIP1LQ8IYY4 767 aaKnown RBP20.09■□□□□ 0.81
RETREG3-206ENST00000588423 TMEM57Q8N5G2 664 aa20.09■□□□□ 0.81
RETREG3-206ENST00000588423 HELBQ8NG08 1087 aaPredicted RBP20.09■□□□□ 0.81
RETREG3-206ENST00000588423 PUS3Q9BZE2 481 aaKnown RBP20.09■□□□□ 0.81
RETREG3-206ENST00000588423 KCNQ5Q9NR82 932 aa20.09■□□□□ 0.81
RETREG3-206ENST00000588423 LRRFIP2Q9Y608 721 aaKnown RBP20.09■□□□□ 0.81
RETREG3-206ENST00000588423 UBE4AQ14139 1066 aa20.08■□□□□ 0.81
RETREG3-206ENST00000588423 EAPPQ56P03 285 aaPredicted RBP20.08■□□□□ 0.81
RETREG3-206ENST00000588423 FTSJ3Q8IY81 847 aaKnown RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms