RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ZNF853P0CG23 659 aa15.5■□□□□ 0.07
BRCA1-225ENST00000586385 RPS8P62241 208 aaKnown RBP15.5■□□□□ 0.07
BRCA1-225ENST00000586385 CFAP44Q96MT7 982 aa15.5■□□□□ 0.07
BRCA1-225ENST00000586385 MBIPQ9NS73 344 aa15.5■□□□□ 0.07
BRCA1-225ENST00000586385 VIL1P09327 827 aaKnown RBP15.49■□□□□ 0.07
BRCA1-225ENST00000586385 RPS12P25398 132 aaKnown RBP15.49■□□□□ 0.07
BRCA1-225ENST00000586385 RBM26Q5T8P6 1007 aaKnown RBP15.49■□□□□ 0.07
BRCA1-225ENST00000586385 RGMBQ6NW40 437 aa15.49■□□□□ 0.07
BRCA1-225ENST00000586385 GBA2Q9HCG7 927 aaPredicted RBP15.49■□□□□ 0.07
BRCA1-225ENST00000586385 HYPKQ9NX55 129 aa15.49■□□□□ 0.07
BRCA1-225ENST00000586385 PODXL2Q9NZ53 605 aa15.49■□□□□ 0.07
BRCA1-225ENST00000586385 SCN9AQ15858 1988 aa15.49■□□□□ 0.07
BRCA1-225ENST00000586385 CASP8AP2Q9UKL3 1982 aa15.48■□□□□ 0.07
BRCA1-225ENST00000586385 MLLT1Q03111 559 aaPredicted RBP15.48■□□□□ 0.07
BRCA1-225ENST00000586385 ZBTB38Q8NAP3 1195 aaPredicted RBP15.48■□□□□ 0.07
BRCA1-225ENST00000586385 PHAXQ9H814 394 aaKnown RBP15.48■□□□□ 0.07
BRCA1-225ENST00000586385 KIF23Q02241 960 aaPredicted RBP15.47■□□□□ 0.07
BRCA1-225ENST00000586385 DGKZQ13574 1117 aa15.47■□□□□ 0.07
BRCA1-225ENST00000586385 KIF4BQ2VIQ3 1234 aa15.47■□□□□ 0.07
BRCA1-225ENST00000586385 JARID2Q92833 1246 aaPredicted RBP15.47■□□□□ 0.07
BRCA1-225ENST00000586385 EYA3Q99504 573 aa15.47■□□□□ 0.07
BRCA1-225ENST00000586385 GGA3Q9NZ52 723 aa15.47■□□□□ 0.07
BRCA1-225ENST00000586385 ZNF609O15014 1411 aa15.46■□□□□ 0.07
BRCA1-225ENST00000586385 WTIPA6NIX2 430 aaPredicted RBP15.46■□□□□ 0.07
BRCA1-225ENST00000586385 UFL1O94874 794 aa15.46■□□□□ 0.07
BRCA1-225ENST00000586385 ZNF280AP59817 542 aaPredicted RBP15.46■□□□□ 0.07
BRCA1-225ENST00000586385 DDX10Q13206 875 aaKnown RBP15.46■□□□□ 0.07
BRCA1-225ENST00000586385 GMLQ99445 158 aa15.46■□□□□ 0.07
BRCA1-225ENST00000586385 C2orf69Q8N8R5 385 aa15.45■□□□□ 0.06
BRCA1-225ENST00000586385 DCPSQ96C86 337 aaKnown RBP15.45■□□□□ 0.06
BRCA1-225ENST00000586385 ZC3H12CQ9C0D7 883 aaKnown RBP15.45■□□□□ 0.06
BRCA1-225ENST00000586385 PCCAP05165 728 aaPredicted RBP15.44■□□□□ 0.06
BRCA1-225ENST00000586385 SLC10A3P09131 477 aa15.44■□□□□ 0.06
BRCA1-225ENST00000586385 WDR43Q15061 677 aaKnown RBP eCLIP15.44■□□□□ 0.06
BRCA1-225ENST00000586385 RIC3Q7Z5B4 369 aa15.44■□□□□ 0.06
BRCA1-225ENST00000586385 CDCA5Q96FF9 252 aa15.44■□□□□ 0.06
BRCA1-225ENST00000586385 CCDC85AQ96PX6 553 aaPredicted RBP15.44■□□□□ 0.06
BRCA1-225ENST00000586385 MYD88Q99836 296 aa15.44■□□□□ 0.06
BRCA1-225ENST00000586385 RNF186Q9NXI6 227 aa15.44■□□□□ 0.06
BRCA1-225ENST00000586385 SAGE1Q9NXZ1 904 aa15.44■□□□□ 0.06
BRCA1-225ENST00000586385 ELL2O00472 640 aaPredicted RBP15.43■□□□□ 0.06
BRCA1-225ENST00000586385 ZNF157P51786 506 aaPredicted RBP15.43■□□□□ 0.06
BRCA1-225ENST00000586385 RSBN1LQ6PCB5 846 aaPredicted RBP15.43■□□□□ 0.06
BRCA1-225ENST00000586385 C8orf58Q8NAV2 365 aa15.43■□□□□ 0.06
BRCA1-225ENST00000586385 CCDC102AQ96A19 550 aa15.43■□□□□ 0.06
BRCA1-225ENST00000586385 CSRNP1Q96S65 589 aa15.43■□□□□ 0.06
BRCA1-225ENST00000586385 GGA1Q9UJY5 639 aa15.43■□□□□ 0.06
BRCA1-225ENST00000586385 POLR2AP24928 1970 aaKnown RBP15.43■□□□□ 0.06
BRCA1-225ENST00000586385 PDE8AO60658 829 aa15.42■□□□□ 0.06
BRCA1-225ENST00000586385 TRPA1O75762 1119 aa15.42■□□□□ 0.06
BRCA1-225ENST00000586385 GOLGA2Q08379 1002 aa15.42■□□□□ 0.06
BRCA1-225ENST00000586385 SCARF1Q14162 830 aa15.42■□□□□ 0.06
BRCA1-225ENST00000586385 ANGEL2Q5VTE6 544 aaKnown RBP15.42■□□□□ 0.06
BRCA1-225ENST00000586385 SULF1Q8IWU6 871 aa15.42■□□□□ 0.06
BRCA1-225ENST00000586385 CCDC191Q8NCU4 936 aa15.42■□□□□ 0.06
BRCA1-225ENST00000586385 AGBL3Q8NEM8 1001 aa15.42■□□□□ 0.06
BRCA1-225ENST00000586385 IFT57Q9NWB7 429 aa15.42■□□□□ 0.06
BRCA1-225ENST00000586385 ANKIB1Q9P2G1 1089 aa15.42■□□□□ 0.06
BRCA1-225ENST00000586385 SCAF8Q9UPN6 1271 aaKnown RBP15.42■□□□□ 0.06
BRCA1-225ENST00000586385 APAF1O14727 1248 aa15.41■□□□□ 0.06
BRCA1-225ENST00000586385 CCDC152Q4G0S7 254 aa15.41■□□□□ 0.06
BRCA1-225ENST00000586385 RASAL3Q86YV0 1011 aa15.41■□□□□ 0.06
BRCA1-225ENST00000586385 METTL22Q9BUU2 404 aaPredicted RBP15.41■□□□□ 0.06
BRCA1-225ENST00000586385 IGKV5-2P06315 115 aa15.4■□□□□ 0.06
BRCA1-225ENST00000586385 MOB2Q70IA6 237 aa15.4■□□□□ 0.06
BRCA1-225ENST00000586385 TSPYL6Q8N831 410 aa15.4■□□□□ 0.06
BRCA1-225ENST00000586385 CWC25Q9NXE8 425 aaPredicted RBP15.4■□□□□ 0.06
BRCA1-225ENST00000586385 XDHP47989 1333 aa15.4■□□□□ 0.06
BRCA1-225ENST00000586385 MXD3Q9BW11 206 aa15.39■□□□□ 0.05
BRCA1-225ENST00000586385 MYOZ2Q9NPC6 264 aa15.39■□□□□ 0.05
BRCA1-225ENST00000586385 USP17L8P0C7I0 530 aa15.38■□□□□ 0.05
BRCA1-225ENST00000586385 GNAI1P63096 354 aa15.38■□□□□ 0.05
BRCA1-225ENST00000586385 PRAMEF18Q5VWM3 479 aa15.38■□□□□ 0.05
BRCA1-225ENST00000586385 ANKRD18AQ8IVF6 992 aa15.38■□□□□ 0.05
BRCA1-225ENST00000586385 TTLL11Q8NHH1 800 aa15.38■□□□□ 0.05
BRCA1-225ENST00000586385 PRKRIP1Q9H875 184 aaPredicted RBP15.38■□□□□ 0.05
BRCA1-225ENST00000586385 USP17L3A6NCW0 530 aa15.37■□□□□ 0.05
BRCA1-225ENST00000586385 USP17L4A6NCW7 530 aa15.37■□□□□ 0.05
BRCA1-225ENST00000586385 G3V3G9 751 aa15.37■□□□□ 0.05
BRCA1-225ENST00000586385 HSP90B1P14625 803 aaKnown RBP15.37■□□□□ 0.05
BRCA1-225ENST00000586385 ATP2B4P23634 1241 aa15.37■□□□□ 0.05
BRCA1-225ENST00000586385 CTSWP56202 376 aa15.37■□□□□ 0.05
BRCA1-225ENST00000586385 SOX10P56693 466 aa15.37■□□□□ 0.05
BRCA1-225ENST00000586385 NBPF9Q3BBW0 867 aa15.37■□□□□ 0.05
BRCA1-225ENST00000586385 DACT2Q5SW24 774 aa15.37■□□□□ 0.05
BRCA1-225ENST00000586385 DCAF8Q5TAQ9 597 aa15.37■□□□□ 0.05
BRCA1-225ENST00000586385 USP17L1Q7RTZ2 530 aa15.37■□□□□ 0.05
BRCA1-225ENST00000586385 PODNQ7Z5L7 613 aa15.37■□□□□ 0.05
BRCA1-225ENST00000586385 TXNRD3Q86VQ6 643 aa15.37■□□□□ 0.05
BRCA1-225ENST00000586385 GREM2Q9H772 168 aa15.37■□□□□ 0.05
BRCA1-225ENST00000586385 MINPP1Q9UNW1 487 aa15.37■□□□□ 0.05
BRCA1-225ENST00000586385 MAP3K2Q9Y2U5 619 aa15.37■□□□□ 0.05
BRCA1-225ENST00000586385 PITPNM2Q9BZ72 1349 aa15.37■□□□□ 0.05
BRCA1-225ENST00000586385 PSME4Q14997 1843 aa15.36■□□□□ 0.05
BRCA1-225ENST00000586385 UBE2Q2LH0YL09 131 aa15.36■□□□□ 0.05
BRCA1-225ENST00000586385 FKBP1BP68106 108 aa15.36■□□□□ 0.05
BRCA1-225ENST00000586385 PAPPA2Q9BXP8 1791 aa15.36■□□□□ 0.05
BRCA1-225ENST00000586385 ZNF646O15015 1829 aaPredicted RBP15.36■□□□□ 0.05
BRCA1-225ENST00000586385 TNRC18O15417 2968 aaPredicted RBP15.36■□□□□ 0.05
BRCA1-225ENST00000586385 MED23Q9ULK4 1368 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms