RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 LUZP1Q86V48 1076 aa16.77■□□□□ 0.28
CDK5RAP3-237ENST00000585163 SPC24Q8NBT2 197 aa16.77■□□□□ 0.28
CDK5RAP3-237ENST00000585163 BRF1Q92994 677 aa16.77■□□□□ 0.28
CDK5RAP3-237ENST00000585163 PGBD1Q96JS3 809 aa16.77■□□□□ 0.28
CDK5RAP3-237ENST00000585163 FMNL2Q96PY5 1086 aa16.77■□□□□ 0.28
CDK5RAP3-237ENST00000585163 ANO6Q4KMQ2 910 aa16.77■□□□□ 0.28
CDK5RAP3-237ENST00000585163 ZSCAN16Q9H4T2 348 aaPredicted RBP16.77■□□□□ 0.28
CDK5RAP3-237ENST00000585163 PLEKHG2Q9H7P9 1386 aa16.77■□□□□ 0.27
CDK5RAP3-237ENST00000585163 ATP5J2-PTCD1G3V325 749 aa16.76■□□□□ 0.27
CDK5RAP3-237ENST00000585163 PTCD1O75127 700 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP3-237ENST00000585163 KBTBD3Q8NAB2 608 aa16.76■□□□□ 0.27
CDK5RAP3-237ENST00000585163 PYCARDQ9ULZ3 195 aa16.76■□□□□ 0.27
CDK5RAP3-237ENST00000585163 SH3TC1Q8TE82 1336 aa16.76■□□□□ 0.27
CDK5RAP3-237ENST00000585163 NR1I2O75469 434 aa16.76■□□□□ 0.27
CDK5RAP3-237ENST00000585163 DDX46Q7L014 1031 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP3-237ENST00000585163 SMARCC2Q8TAQ2 1214 aa16.76■□□□□ 0.27
CDK5RAP3-237ENST00000585163 CBX8Q9HC52 389 aa16.76■□□□□ 0.27
CDK5RAP3-237ENST00000585163 CYP27B1O15528 508 aa16.75■□□□□ 0.27
CDK5RAP3-237ENST00000585163 HSP90B1P14625 803 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-237ENST00000585163 PLBD2Q8NHP8 589 aa16.75■□□□□ 0.27
CDK5RAP3-237ENST00000585163 LLPHQ9BRT6 129 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-237ENST00000585163 H3BQV1 296 aa16.75■□□□□ 0.27
CDK5RAP3-237ENST00000585163 HMGB1P09429 215 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-237ENST00000585163 SCRN1Q12765 414 aa16.75■□□□□ 0.27
CDK5RAP3-237ENST00000585163 IFFO2Q5TF58 517 aa16.75■□□□□ 0.27
CDK5RAP3-237ENST00000585163 CFAP45Q9UL16 551 aa16.75■□□□□ 0.27
CDK5RAP3-237ENST00000585163 STOX1Q6ZVD7 989 aa16.74■□□□□ 0.27
CDK5RAP3-237ENST00000585163 PROSER2Q86WR7 435 aaPredicted RBP16.74■□□□□ 0.27
CDK5RAP3-237ENST00000585163 BICD2Q8TD16 824 aa16.74■□□□□ 0.27
CDK5RAP3-237ENST00000585163 PALLDQ8WX93 1383 aa16.74■□□□□ 0.27
CDK5RAP3-237ENST00000585163 COL18A1P39060 1754 aa16.74■□□□□ 0.27
CDK5RAP3-237ENST00000585163 PFKFB2O60825 505 aa16.74■□□□□ 0.27
CDK5RAP3-237ENST00000585163 LMBR1LQ6UX01 489 aa16.74■□□□□ 0.27
CDK5RAP3-237ENST00000585163 DDX11Q96FC9 970 aa16.74■□□□□ 0.27
CDK5RAP3-237ENST00000585163 C19orf44Q9H6X5 657 aa16.74■□□□□ 0.27
CDK5RAP3-237ENST00000585163 DHX32Q7L7V1 743 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-237ENST00000585163 TICAM2Q86XR7 235 aa16.73■□□□□ 0.27
CDK5RAP3-237ENST00000585163 TDRD7Q8NHU6 1098 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-237ENST00000585163 FOXO4P98177 505 aa16.73■□□□□ 0.27
CDK5RAP3-237ENST00000585163 HELLSQ9NRZ9 838 aa16.73■□□□□ 0.27
CDK5RAP3-237ENST00000585163 LAMA4Q16363 1823 aa16.73■□□□□ 0.27
CDK5RAP3-237ENST00000585163 PTGS1P23219 599 aa16.72■□□□□ 0.27
CDK5RAP3-237ENST00000585163 PLA2G4DQ86XP0 818 aa16.72■□□□□ 0.27
CDK5RAP3-237ENST00000585163 DSCC1Q9BVC3 393 aa16.72■□□□□ 0.27
CDK5RAP3-237ENST00000585163 LRRC2Q9BYS8 371 aa16.72■□□□□ 0.27
CDK5RAP3-237ENST00000585163 GLI3P10071 1580 aa16.72■□□□□ 0.27
CDK5RAP3-237ENST00000585163 H7C1W4 665 aa16.72■□□□□ 0.27
CDK5RAP3-237ENST00000585163 CAVIN2O95810 425 aa16.72■□□□□ 0.27
CDK5RAP3-237ENST00000585163 CSB-PGBD3P0DP91 1061 aa16.72■□□□□ 0.27
CDK5RAP3-237ENST00000585163 ADD1P35611 737 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP3-237ENST00000585163 ZNF165P49910 485 aa16.72■□□□□ 0.27
CDK5RAP3-237ENST00000585163 NAA16Q6N069 864 aaPredicted RBP16.72■□□□□ 0.27
CDK5RAP3-237ENST00000585163 ATG9AQ7Z3C6 839 aa16.72■□□□□ 0.27
CDK5RAP3-237ENST00000585163 NSUN7Q8NE18 718 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP3-237ENST00000585163 AGXT2Q9BYV1 514 aa16.72■□□□□ 0.27
CDK5RAP3-237ENST00000585163 GPR108Q9NPR9 543 aa16.72■□□□□ 0.27
CDK5RAP3-237ENST00000585163 KIF3AQ9Y496 699 aa16.72■□□□□ 0.27
CDK5RAP3-237ENST00000585163 LAMB4A4D0S4 1761 aa16.72■□□□□ 0.27
CDK5RAP3-237ENST00000585163 PKD1L3Q7Z443 1732 aa16.72■□□□□ 0.27
CDK5RAP3-237ENST00000585163 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.71■□□□□ 0.27
CDK5RAP3-237ENST00000585163 PAG1Q9NWQ8 432 aa16.71■□□□□ 0.27
CDK5RAP3-237ENST00000585163 ZNF75DP51815 510 aa16.71■□□□□ 0.27
CDK5RAP3-237ENST00000585163 CABP4P57796 275 aa16.71■□□□□ 0.27
CDK5RAP3-237ENST00000585163 EXOSC10Q01780 885 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP3-237ENST00000585163 GOLIM4O00461 696 aa16.7■□□□□ 0.26
CDK5RAP3-237ENST00000585163 CTDNEP1O95476 244 aa16.7■□□□□ 0.26
CDK5RAP3-237ENST00000585163 CCDC186Q7Z3E2 898 aa16.7■□□□□ 0.26
CDK5RAP3-237ENST00000585163 ZNF710Q8N1W2 664 aa16.7■□□□□ 0.26
CDK5RAP3-237ENST00000585163 TRIM5Q9C035 493 aa16.7■□□□□ 0.26
CDK5RAP3-237ENST00000585163 DNAJC25Q9H1X3 360 aa16.7■□□□□ 0.26
CDK5RAP3-237ENST00000585163 TMEM94Q12767 1356 aa16.7■□□□□ 0.26
CDK5RAP3-237ENST00000585163 MYH15Q9Y2K3 1946 aa16.7■□□□□ 0.26
CDK5RAP3-237ENST00000585163 ZMYM1Q5SVZ6 1142 aa16.7■□□□□ 0.26
CDK5RAP3-237ENST00000585163 TSC1Q92574 1164 aa16.7■□□□□ 0.26
CDK5RAP3-237ENST00000585163 NEUROD6Q96NK8 337 aa16.7■□□□□ 0.26
CDK5RAP3-237ENST00000585163 RCOR1Q9UKL0 485 aa16.7■□□□□ 0.26
CDK5RAP3-237ENST00000585163 ADAMTSL3P82987 1691 aa16.69■□□□□ 0.26
CDK5RAP3-237ENST00000585163 NBPF26B4DH59 902 aa16.69■□□□□ 0.26
CDK5RAP3-237ENST00000585163 CHAF1AQ13111 956 aaPredicted RBP16.69■□□□□ 0.26
CDK5RAP3-237ENST00000585163 NBPF14Q5TI25 921 aa16.69■□□□□ 0.26
CDK5RAP3-237ENST00000585163 NBPF10Q6P3W6 841 aaKnown RBP16.69■□□□□ 0.26
CDK5RAP3-237ENST00000585163 NBPF15Q8N660 670 aa16.69■□□□□ 0.26
CDK5RAP3-237ENST00000585163 CCDC9Q9Y3X0 531 aaKnown RBP16.69■□□□□ 0.26
CDK5RAP3-237ENST00000585163 PTPDC1A2A3K4 754 aa16.68■□□□□ 0.26
CDK5RAP3-237ENST00000585163 IL15P40933 162 aaPredicted RBP16.68■□□□□ 0.26
CDK5RAP3-237ENST00000585163 TIMM10P62072 90 aa16.68■□□□□ 0.26
CDK5RAP3-237ENST00000585163 APOBRQ0VD83 1088 aa16.68■□□□□ 0.26
CDK5RAP3-237ENST00000585163 SLFNL1Q499Z3 407 aa16.68■□□□□ 0.26
CDK5RAP3-237ENST00000585163 SALL1Q9NSC2 1324 aa16.68■□□□□ 0.26
CDK5RAP3-237ENST00000585163 HSPD1P10809 573 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP3-237ENST00000585163 ATL3Q6DD88 541 aa16.68■□□□□ 0.26
CDK5RAP3-237ENST00000585163 DRC7Q8IY82 874 aa16.68■□□□□ 0.26
CDK5RAP3-237ENST00000585163 CWC25Q9NXE8 425 aaPredicted RBP16.68■□□□□ 0.26
CDK5RAP3-237ENST00000585163 E7EWF7 191 aa16.67■□□□□ 0.26
CDK5RAP3-237ENST00000585163 CTAGE5O15320 804 aa16.67■□□□□ 0.26
CDK5RAP3-237ENST00000585163 CEBPZQ03701 1054 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-237ENST00000585163 NRBP1Q9UHY1 535 aa16.67■□□□□ 0.26
CDK5RAP3-237ENST00000585163 PARP4Q9UKK3 1724 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-237ENST00000585163 CHRNA2Q15822 529 aa16.67■□□□□ 0.26
CDK5RAP3-237ENST00000585163 ZSCAN25Q6NSZ9 544 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms